RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 MARCH6O60337 910 aa3.93□□□□□ -1.78
SCFD1-204ENST00000463622 TBC1D4O60343 1298 aa3.93□□□□□ -1.78
SCFD1-204ENST00000463622 ULK1O75385 1050 aa3.93□□□□□ -1.78
SCFD1-204ENST00000463622 GPR32O75388 356 aa3.93□□□□□ -1.78
SCFD1-204ENST00000463622 BMP15O95972 392 aa3.93□□□□□ -1.78
SCFD1-204ENST00000463622 EDN1P05305 212 aa3.93□□□□□ -1.78
SCFD1-204ENST00000463622 ZSCAN20P17040 1043 aaPredicted RBP3.93□□□□□ -1.78
SCFD1-204ENST00000463622 KLRC1P26715 233 aa3.93□□□□□ -1.78
SCFD1-204ENST00000463622 RPA1P27694 616 aa3.93□□□□□ -1.78
SCFD1-204ENST00000463622 PBX3P40426 434 aa3.93□□□□□ -1.78
SCFD1-204ENST00000463622 SYKP43405 635 aa3.93□□□□□ -1.78
SCFD1-204ENST00000463622 CRYBB1P53674 252 aaPredicted RBP3.93□□□□□ -1.78
SCFD1-204ENST00000463622 SLC12A3P55017 1021 aa3.93□□□□□ -1.78
SCFD1-204ENST00000463622 IGBP1P78318 339 aa3.93□□□□□ -1.78
SCFD1-204ENST00000463622 TMPRSS15P98073 1019 aa3.93□□□□□ -1.78
SCFD1-204ENST00000463622 PRKCEQ02156 737 aa3.93□□□□□ -1.78
SCFD1-204ENST00000463622 TOR2AQ5JU69 321 aa3.93□□□□□ -1.78
SCFD1-204ENST00000463622 CLLU1OSQ5K130 101 aa3.93□□□□□ -1.78
SCFD1-204ENST00000463622 ISM2Q6H9L7 571 aa3.93□□□□□ -1.78
SCFD1-204ENST00000463622 KRBA2Q6ZNG9 492 aa3.93□□□□□ -1.78
SCFD1-204ENST00000463622 CCDC149Q6ZUS6 474 aa3.93□□□□□ -1.78
SCFD1-204ENST00000463622 FAM228AQ86W67 206 aa3.93□□□□□ -1.78
SCFD1-204ENST00000463622 GAS2L3Q86XJ1 694 aa3.93□□□□□ -1.78
SCFD1-204ENST00000463622 ECHDC2Q86YB7 292 aa3.93□□□□□ -1.78
SCFD1-204ENST00000463622 DAW1Q8N136 415 aa3.93□□□□□ -1.78
SCFD1-204ENST00000463622 VPS52Q8N1B4 723 aa3.93□□□□□ -1.78
SCFD1-204ENST00000463622 LRRC43Q8N309 656 aa3.93□□□□□ -1.78
SCFD1-204ENST00000463622 ZNF480Q8WV37 535 aa3.93□□□□□ -1.78
SCFD1-204ENST00000463622 RAD54LQ92698 747 aa3.93□□□□□ -1.78
SCFD1-204ENST00000463622 MYEOVQ96EZ4 313 aa3.93□□□□□ -1.78
SCFD1-204ENST00000463622 PAGE5Q96GU1 130 aa3.93□□□□□ -1.78
SCFD1-204ENST00000463622 CDHR1Q96JP9 859 aa3.93□□□□□ -1.78
SCFD1-204ENST00000463622 ZNF668Q96K58 619 aaPredicted RBP3.93□□□□□ -1.78
SCFD1-204ENST00000463622 MED15Q96RN5 788 aa3.93□□□□□ -1.78
SCFD1-204ENST00000463622 NAP1L4Q99733 375 aaKnown RBP3.93□□□□□ -1.78
SCFD1-204ENST00000463622 FUCA2Q9BTY2 467 aa3.93□□□□□ -1.78
SCFD1-204ENST00000463622 SLC46A2Q9BY10 475 aa3.93□□□□□ -1.78
SCFD1-204ENST00000463622 BHMT2Q9H2M3 363 aa3.93□□□□□ -1.78
SCFD1-204ENST00000463622 CLSTN2Q9H4D0 955 aa3.93□□□□□ -1.78
SCFD1-204ENST00000463622 LDAHQ9H6V9 325 aa3.93□□□□□ -1.78
SCFD1-204ENST00000463622 SFXN1Q9H9B4 322 aa3.93□□□□□ -1.78
SCFD1-204ENST00000463622 WDR6Q9NNW5 1121 aaKnown RBP3.93□□□□□ -1.78
SCFD1-204ENST00000463622 XPNPEP1Q9NQW7 623 aa3.93□□□□□ -1.78
SCFD1-204ENST00000463622 TBC1D22BQ9NU19 505 aa3.93□□□□□ -1.78
SCFD1-204ENST00000463622 ZSCAN32Q9NX65 697 aa3.93□□□□□ -1.78
SCFD1-204ENST00000463622 ATG2AQ2TAZ0 1938 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 FAM208BQ5VWN6 2430 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 A0A0U1RQF3 1178 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 GRID2IPA4D2P6 1211 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 RNASET2O00584 256 aaKnown RBP3.92□□□□□ -1.78
SCFD1-204ENST00000463622 C1RP00736 705 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 PLA2G4BP0C869 781 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 LAMP2P13473 410 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 CYP11B2P19099 503 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 UBA7P41226 1012 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 STAT6P42226 847 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 MASP1P48740 699 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 ALDH7A1P49419 539 aaKnown RBP3.92□□□□□ -1.78
SCFD1-204ENST00000463622 RARRES1P49788 294 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 SLC26A2P50443 739 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 CLCN4P51793 760 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 CASP5P51878 434 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 CHN2P52757 468 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 RAP2BP61225 183 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 MEF2AQ02078 507 aaPredicted RBP3.92□□□□□ -1.78
SCFD1-204ENST00000463622 PDIA5Q14554 519 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 STAT4Q14765 748 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 BMT2Q1RMZ1 405 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 KLHL40Q2TBA0 621 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 KRT79Q5XKE5 535 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 METRNLQ641Q3 311 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 DCLRE1AQ6PJP8 1040 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 MAEAQ7L5Y9 396 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 TMEM173Q86WV6 379 aaPredicted RBP3.92□□□□□ -1.78
SCFD1-204ENST00000463622 CPEB3Q8NE35 698 aaKnown RBP3.92□□□□□ -1.78
SCFD1-204ENST00000463622 PJA1Q8NG27 643 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 ATRIPQ8WXE1 791 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 RSPH1Q8WYR4 309 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 CLDN23Q96B33 292 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 DNAJC19Q96DA6 116 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 IGSF21Q96ID5 467 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 ACAP3Q96P50 834 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 KLHL5Q96PQ7 755 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 MYADMQ96S97 322 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 DCLRE1CQ96SD1 692 aaKnown RBP3.92□□□□□ -1.78
SCFD1-204ENST00000463622 FIZ1Q96SL8 496 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 SDF4Q9BRK5 362 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 POLR3CQ9BUI4 534 aaPredicted RBP3.92□□□□□ -1.78
SCFD1-204ENST00000463622 VN1R3Q9BXE9 311 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 SERHL2Q9H4I8 314 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 CAAP1Q9H8G2 361 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 CYP4F11Q9HBI6 524 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 ZNF302Q9NR11 478 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 ARHGEF3Q9NR81 526 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 C14orf119Q9NWQ9 140 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 APOBEC2Q9Y235 224 aaKnown RBP3.92□□□□□ -1.78
SCFD1-204ENST00000463622 PCDHA10Q9Y5I2 948 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 ZZEF1O43149 2961 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 ARID2Q68CP9 1835 aa3.92□□□□□ -1.78
SCFD1-204ENST00000463622 ANKRD11Q6UB99 2663 aaPredicted RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms