RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 NR1H3Q13133 447 aa14.67□□□□□ -0.06
COL6A1-202ENST00000463060 CDH18Q13634 790 aa14.67□□□□□ -0.06
COL6A1-202ENST00000463060 DARS2Q6PI48 645 aaKnown RBP14.67□□□□□ -0.06
COL6A1-202ENST00000463060 CDKL3Q8IVW4 592 aaPredicted RBP14.67□□□□□ -0.06
COL6A1-202ENST00000463060 KLHL7Q8IXQ5 586 aa14.67□□□□□ -0.06
COL6A1-202ENST00000463060 APCDD1Q8J025 514 aa14.67□□□□□ -0.06
COL6A1-202ENST00000463060 ALLCQ8N6M5 410 aa14.67□□□□□ -0.06
COL6A1-202ENST00000463060 NAT16Q8N8M0 369 aa14.67□□□□□ -0.06
COL6A1-202ENST00000463060 TFB1MQ8WVM0 346 aaKnown RBP14.67□□□□□ -0.06
COL6A1-202ENST00000463060 RUNDC3BQ96NL0 473 aa14.67□□□□□ -0.06
COL6A1-202ENST00000463060 ABCB8Q9NUT2 735 aa14.67□□□□□ -0.06
COL6A1-202ENST00000463060 THEGQ9P2T0 379 aa14.67□□□□□ -0.06
COL6A1-202ENST00000463060 AMACRQ9UHK6 382 aa14.67□□□□□ -0.06
COL6A1-202ENST00000463060 FEZ2Q9UHY8 353 aaPredicted RBP14.67□□□□□ -0.06
COL6A1-202ENST00000463060 ZNF148Q9UQR1 794 aa14.67□□□□□ -0.06
COL6A1-202ENST00000463060 CFAP69A5D8W1 941 aa14.66□□□□□ -0.06
COL6A1-202ENST00000463060 C5orf60A6NFR6 353 aa14.66□□□□□ -0.06
COL6A1-202ENST00000463060 ASGR2P07307 311 aa14.66□□□□□ -0.06
COL6A1-202ENST00000463060 GDF10P55107 478 aa14.66□□□□□ -0.06
COL6A1-202ENST00000463060 ZP2Q05996 745 aa14.66□□□□□ -0.06
COL6A1-202ENST00000463060 DMC1Q14565 340 aa14.66□□□□□ -0.06
COL6A1-202ENST00000463060 PLEKHG6Q3KR16 790 aa14.66□□□□□ -0.06
COL6A1-202ENST00000463060 TMEM215Q68D42 235 aa14.66□□□□□ -0.06
COL6A1-202ENST00000463060 ADIPOR2Q86V24 386 aa14.66□□□□□ -0.06
COL6A1-202ENST00000463060 TEX26Q8N6G2 289 aa14.66□□□□□ -0.06
COL6A1-202ENST00000463060 DCAF4L2Q8NA75 395 aa14.66□□□□□ -0.06
COL6A1-202ENST00000463060 GLIS1Q8NBF1 620 aa14.66□□□□□ -0.06
COL6A1-202ENST00000463060 CCNYQ8ND76 341 aa14.66□□□□□ -0.06
COL6A1-202ENST00000463060 HTR3CQ8WXA8 447 aa14.66□□□□□ -0.06
COL6A1-202ENST00000463060 TTC17Q96AE7 1141 aa14.66□□□□□ -0.06
COL6A1-202ENST00000463060 ZNF419Q96HQ0 510 aaPredicted RBP14.66□□□□□ -0.06
COL6A1-202ENST00000463060 XPO6Q96QU8 1125 aaKnown RBP14.66□□□□□ -0.06
COL6A1-202ENST00000463060 IL12RB2Q99665 862 aa14.66□□□□□ -0.06
COL6A1-202ENST00000463060 LRRC1Q9BTT6 524 aa14.66□□□□□ -0.06
COL6A1-202ENST00000463060 BRD9Q9H8M2 597 aa14.66□□□□□ -0.06
COL6A1-202ENST00000463060 GGA2Q9UJY4 613 aa14.66□□□□□ -0.06
COL6A1-202ENST00000463060 A0A0A0MRY4 1105 aa14.65□□□□□ -0.06
COL6A1-202ENST00000463060 RAD51CO43502 376 aa14.65□□□□□ -0.06
COL6A1-202ENST00000463060 GCATO75600 419 aa14.65□□□□□ -0.06
COL6A1-202ENST00000463060 ZNF189O75820 626 aaPredicted RBP14.65□□□□□ -0.06
COL6A1-202ENST00000463060 PABPC1P11940 636 aaKnown RBP14.65□□□□□ -0.06
COL6A1-202ENST00000463060 BMP1P13497 986 aa14.65□□□□□ -0.06
COL6A1-202ENST00000463060 GLDCP23378 1020 aa14.65□□□□□ -0.06
COL6A1-202ENST00000463060 DGKGP49619 791 aa14.65□□□□□ -0.06
COL6A1-202ENST00000463060 CLCN6P51797 869 aa14.65□□□□□ -0.06
COL6A1-202ENST00000463060 NRLP54845 237 aa14.65□□□□□ -0.06
COL6A1-202ENST00000463060 IFI35P80217 286 aaPredicted RBP14.65□□□□□ -0.06
COL6A1-202ENST00000463060 ARF5P84085 180 aa14.65□□□□□ -0.06
COL6A1-202ENST00000463060 LMNB2Q03252 620 aa14.65□□□□□ -0.06
COL6A1-202ENST00000463060 AP1B1Q10567 949 aa14.65□□□□□ -0.06
COL6A1-202ENST00000463060 DHX34Q14147 1143 aaKnown RBP14.65□□□□□ -0.06
COL6A1-202ENST00000463060 GEN1Q17RS7 908 aa14.65□□□□□ -0.06
COL6A1-202ENST00000463060 FUT11Q495W5 492 aa14.65□□□□□ -0.06
COL6A1-202ENST00000463060 PITRM1Q5JRX3 1037 aa14.65□□□□□ -0.06
COL6A1-202ENST00000463060 NAIF1Q69YI7 327 aaPredicted RBP14.65□□□□□ -0.06
COL6A1-202ENST00000463060 CCDC117Q8IWD4 279 aaPredicted RBP14.65□□□□□ -0.06
COL6A1-202ENST00000463060 CCDC13Q8IYE1 715 aa14.65□□□□□ -0.06
COL6A1-202ENST00000463060 CCDC105Q8IYK2 499 aa14.65□□□□□ -0.06
COL6A1-202ENST00000463060 ATPAF2Q8N5M1 289 aa14.65□□□□□ -0.06
COL6A1-202ENST00000463060 CNTD1Q8N815 330 aa14.65□□□□□ -0.06
COL6A1-202ENST00000463060 FAM71DQ8N9W8 422 aa14.65□□□□□ -0.06
COL6A1-202ENST00000463060 DNASE1L2Q92874 299 aa14.65□□□□□ -0.06
COL6A1-202ENST00000463060 ACDQ96AP0 544 aa14.65□□□□□ -0.06
COL6A1-202ENST00000463060 ZNF599Q96NL3 588 aa14.65□□□□□ -0.06
COL6A1-202ENST00000463060 SPON2Q9BUD6 331 aa14.65□□□□□ -0.06
COL6A1-202ENST00000463060 MUC3BQ9H195 1237 aa14.65□□□□□ -0.06
COL6A1-202ENST00000463060 ATP13A1Q9HD20 1204 aa14.65□□□□□ -0.06
COL6A1-202ENST00000463060 SLC2A4RGQ9NR83 387 aa14.65□□□□□ -0.06
COL6A1-202ENST00000463060 DNAJC17Q9NVM6 304 aaKnown RBP14.65□□□□□ -0.06
COL6A1-202ENST00000463060 KIAA1549LQ6ZVL6 1849 aa14.64□□□□□ -0.07
COL6A1-202ENST00000463060 FAM187AA6NFU0 413 aa14.64□□□□□ -0.07
COL6A1-202ENST00000463060 SHISA7A6NL88 538 aa14.64□□□□□ -0.07
COL6A1-202ENST00000463060 KCNK1O00180 336 aa14.64□□□□□ -0.07
COL6A1-202ENST00000463060 KCNN4O15554 427 aa14.64□□□□□ -0.07
COL6A1-202ENST00000463060 TTI1O43156 1089 aa14.64□□□□□ -0.07
COL6A1-202ENST00000463060 MTSS1O43312 755 aa14.64□□□□□ -0.07
COL6A1-202ENST00000463060 SNAP91O60641 907 aa14.64□□□□□ -0.07
COL6A1-202ENST00000463060 PTPN3P26045 913 aa14.64□□□□□ -0.07
COL6A1-202ENST00000463060 IVDP26440 423 aa14.64□□□□□ -0.07
COL6A1-202ENST00000463060 VASPP50552 380 aaPredicted RBP14.64□□□□□ -0.07
COL6A1-202ENST00000463060 TUBB4BP68371 445 aa14.64□□□□□ -0.07
COL6A1-202ENST00000463060 TDGQ13569 410 aa14.64□□□□□ -0.07
COL6A1-202ENST00000463060 HNRNPDQ14103 355 aaKnown RBP14.64□□□□□ -0.07
COL6A1-202ENST00000463060 GLE1Q53GS7 698 aaKnown RBP14.64□□□□□ -0.07
COL6A1-202ENST00000463060 HEATR6Q6AI08 1181 aaKnown RBP14.64□□□□□ -0.07
COL6A1-202ENST00000463060 IL31Q6EBC2 164 aa14.64□□□□□ -0.07
COL6A1-202ENST00000463060 TIGD7Q6NT04 549 aaPredicted RBP14.64□□□□□ -0.07
COL6A1-202ENST00000463060 SYDE1Q6ZW31 735 aaPredicted RBP14.64□□□□□ -0.07
COL6A1-202ENST00000463060 MAATS1Q7Z4T9 603 aa14.64□□□□□ -0.07
COL6A1-202ENST00000463060 JAMLQ86YT9 394 aa14.64□□□□□ -0.07
COL6A1-202ENST00000463060 CCDC26Q8TAB7 109 aa14.64□□□□□ -0.07
COL6A1-202ENST00000463060 TTC8Q8TAM2 541 aa14.64□□□□□ -0.07
COL6A1-202ENST00000463060 GRK7Q8WTQ7 553 aa14.64□□□□□ -0.07
COL6A1-202ENST00000463060 ATXN2LQ8WWM7 1075 aaKnown RBP14.64□□□□□ -0.07
COL6A1-202ENST00000463060 FBRSL1Q9HCM7 1045 aaKnown RBP14.64□□□□□ -0.07
COL6A1-202ENST00000463060 DEC1Q9P2X7 70 aa14.64□□□□□ -0.07
COL6A1-202ENST00000463060 VPS51Q9UID3 782 aa14.64□□□□□ -0.07
COL6A1-202ENST00000463060 VPS28Q9UK41 221 aa14.64□□□□□ -0.07
COL6A1-202ENST00000463060 TICRRQ7Z2Z1 1910 aa14.64□□□□□ -0.07
COL6A1-202ENST00000463060 SHROOM3Q8TF72 1996 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms