RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 EIF3CQ99613 913 aaKnown RBP16.23■□□□□ 0.19
ERCC3-206ENST00000462306 HINFPQ9BQA5 517 aa16.23■□□□□ 0.19
ERCC3-206ENST00000462306 ANP32EQ9BTT0 268 aa16.23■□□□□ 0.19
ERCC3-206ENST00000462306 SPON2Q9BUD6 331 aa16.23■□□□□ 0.19
ERCC3-206ENST00000462306 ACE2Q9BYF1 805 aaPredicted RBP16.23■□□□□ 0.19
ERCC3-206ENST00000462306 DHX35Q9H5Z1 703 aaKnown RBP16.23■□□□□ 0.19
ERCC3-206ENST00000462306 ATP13A1Q9HD20 1204 aa16.23■□□□□ 0.19
ERCC3-206ENST00000462306 PARD6AQ9NPB6 346 aa16.23■□□□□ 0.19
ERCC3-206ENST00000462306 CTTNBP2NLQ9P2B4 639 aa16.23■□□□□ 0.19
ERCC3-206ENST00000462306 UVRAGQ9P2Y5 699 aa16.23■□□□□ 0.19
ERCC3-206ENST00000462306 FRYLO94915 3013 aa16.22■□□□□ 0.19
ERCC3-206ENST00000462306 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.22■□□□□ 0.19
ERCC3-206ENST00000462306 K7ERQ8 282 aa16.22■□□□□ 0.19
ERCC3-206ENST00000462306 MYO1FO00160 1098 aa16.22■□□□□ 0.19
ERCC3-206ENST00000462306 CBX4O00257 560 aa16.22■□□□□ 0.19
ERCC3-206ENST00000462306 ACVRL1P37023 503 aa16.22■□□□□ 0.19
ERCC3-206ENST00000462306 DLG2Q15700 870 aa16.22■□□□□ 0.19
ERCC3-206ENST00000462306 SPDYCQ5MJ68 293 aa16.22■□□□□ 0.19
ERCC3-206ENST00000462306 ZNF776Q68DI1 518 aaPredicted RBP16.22■□□□□ 0.19
ERCC3-206ENST00000462306 LINGO4Q6UY18 593 aa16.22■□□□□ 0.19
ERCC3-206ENST00000462306 SLC36A4Q6YBV0 504 aa16.22■□□□□ 0.19
ERCC3-206ENST00000462306 LPCAT2Q7L5N7 544 aa16.22■□□□□ 0.19
ERCC3-206ENST00000462306 TMEFF1Q8IYR6 380 aa16.22■□□□□ 0.19
ERCC3-206ENST00000462306 STK40Q8N2I9 435 aa16.22■□□□□ 0.19
ERCC3-206ENST00000462306 ARHGEF2Q92974 986 aaKnown RBP16.22■□□□□ 0.19
ERCC3-206ENST00000462306 MAGEH1Q9H213 219 aa16.22■□□□□ 0.19
ERCC3-206ENST00000462306 ARRDC1-AS1Q9H2J1 176 aa16.22■□□□□ 0.19
ERCC3-206ENST00000462306 WSB2Q9NYS7 404 aaPredicted RBP16.22■□□□□ 0.19
ERCC3-206ENST00000462306 CHD5Q8TDI0 1954 aa16.22■□□□□ 0.19
ERCC3-206ENST00000462306 THADAQ6YHU6 1953 aa16.21■□□□□ 0.19
ERCC3-206ENST00000462306 BCLAF3A2AJT9 711 aaKnown RBP16.21■□□□□ 0.19
ERCC3-206ENST00000462306 FGF10O15520 208 aaPredicted RBP16.21■□□□□ 0.19
ERCC3-206ENST00000462306 SMAD6O43541 496 aaKnown RBP16.21■□□□□ 0.19
ERCC3-206ENST00000462306 RAMP2O60895 175 aa16.21■□□□□ 0.19
ERCC3-206ENST00000462306 LRP3O75074 770 aa16.21■□□□□ 0.19
ERCC3-206ENST00000462306 CD160O95971 181 aa16.21■□□□□ 0.19
ERCC3-206ENST00000462306 ACADMP11310 421 aa16.21■□□□□ 0.19
ERCC3-206ENST00000462306 CD6P30203 668 aa16.21■□□□□ 0.19
ERCC3-206ENST00000462306 ETFBP38117 255 aa16.21■□□□□ 0.19
ERCC3-206ENST00000462306 PTGER3P43115 390 aa16.21■□□□□ 0.19
ERCC3-206ENST00000462306 TPI1P60174 286 aa16.21■□□□□ 0.19
ERCC3-206ENST00000462306 ARF5P84085 180 aa16.21■□□□□ 0.19
ERCC3-206ENST00000462306 RPL6Q02878 288 aaKnown RBP16.21■□□□□ 0.19
ERCC3-206ENST00000462306 SLC25A11Q02978 314 aaKnown RBP16.21■□□□□ 0.19
ERCC3-206ENST00000462306 SPEM2Q0P670 501 aa16.21■□□□□ 0.19
ERCC3-206ENST00000462306 ELAVL3Q14576 367 aaKnown RBP16.21■□□□□ 0.19
ERCC3-206ENST00000462306 ACCSLQ4AC99 568 aa16.21■□□□□ 0.19
ERCC3-206ENST00000462306 BOLA3Q53S33 107 aa16.21■□□□□ 0.19
ERCC3-206ENST00000462306 KCNT1Q5JUK3 1230 aa16.21■□□□□ 0.19
ERCC3-206ENST00000462306 PLA2G2CQ5R387 149 aa16.21■□□□□ 0.19
ERCC3-206ENST00000462306 TXNRD3NBQ6F5E7 133 aa16.21■□□□□ 0.19
ERCC3-206ENST00000462306 CPNE8Q86YQ8 564 aa16.21■□□□□ 0.19
ERCC3-206ENST00000462306 UMODL1-AS1Q8N2C9 162 aa16.21■□□□□ 0.19
ERCC3-206ENST00000462306 ATP11CQ8NB49 1132 aa16.21■□□□□ 0.19
ERCC3-206ENST00000462306 TOE1Q96GM8 510 aaKnown RBP16.21■□□□□ 0.19
ERCC3-206ENST00000462306 PANX2Q96RD6 677 aa16.21■□□□□ 0.19
ERCC3-206ENST00000462306 CATSPERBQ9H7T0 1116 aa16.21■□□□□ 0.19
ERCC3-206ENST00000462306 OSGEPQ9NPF4 335 aa16.21■□□□□ 0.19
ERCC3-206ENST00000462306 PCDHGA5Q9Y5G8 931 aa16.21■□□□□ 0.19
ERCC3-206ENST00000462306 CXorf51AA0A1B0GTR3 108 aa16.2■□□□□ 0.18
ERCC3-206ENST00000462306 EEF2KO00418 725 aaKnown RBP16.2■□□□□ 0.18
ERCC3-206ENST00000462306 RNASEH1O60930 286 aaKnown RBP16.2■□□□□ 0.18
ERCC3-206ENST00000462306 ZNF821O75541 412 aaPredicted RBP16.2■□□□□ 0.18
ERCC3-206ENST00000462306 PROSCO94903 275 aa16.2■□□□□ 0.18
ERCC3-206ENST00000462306 DNTTP04053 509 aa16.2■□□□□ 0.18
ERCC3-206ENST00000462306 RARAP10276 462 aa16.2■□□□□ 0.18
ERCC3-206ENST00000462306 GOT1P17174 413 aa16.2■□□□□ 0.18
ERCC3-206ENST00000462306 FECHP22830 423 aa16.2■□□□□ 0.18
ERCC3-206ENST00000462306 OXTRP30559 389 aa16.2■□□□□ 0.18
ERCC3-206ENST00000462306 HCAR3P49019 387 aa16.2■□□□□ 0.18
ERCC3-206ENST00000462306 DHPSP49366 369 aaPredicted RBP16.2■□□□□ 0.18
ERCC3-206ENST00000462306 CLCN6P51797 869 aa16.2■□□□□ 0.18
ERCC3-206ENST00000462306 SLC20A2Q08357 652 aa16.2■□□□□ 0.18
ERCC3-206ENST00000462306 POLD3Q15054 466 aaPredicted RBP16.2■□□□□ 0.18
ERCC3-206ENST00000462306 CST6Q15828 149 aa16.2■□□□□ 0.18
ERCC3-206ENST00000462306 DPYSL2Q16555 572 aa16.2■□□□□ 0.18
ERCC3-206ENST00000462306 SMTNL2Q2TAL5 461 aa16.2■□□□□ 0.18
ERCC3-206ENST00000462306 PPP6R3Q5H9R7 873 aaPredicted RBP16.2■□□□□ 0.18
ERCC3-206ENST00000462306 IL31Q6EBC2 164 aa16.2■□□□□ 0.18
ERCC3-206ENST00000462306 RETSATQ6NUM9 610 aa16.2■□□□□ 0.18
ERCC3-206ENST00000462306 RFX8Q6ZV50 586 aa16.2■□□□□ 0.18
ERCC3-206ENST00000462306 Q6ZVU0 165 aa16.2■□□□□ 0.18
ERCC3-206ENST00000462306 MMAAQ8IVH4 418 aaKnown RBP16.2■□□□□ 0.18
ERCC3-206ENST00000462306 SLC41A1Q8IVJ1 513 aa16.2■□□□□ 0.18
ERCC3-206ENST00000462306 DEFB119Q8N690 84 aa16.2■□□□□ 0.18
ERCC3-206ENST00000462306 SLC35G2Q8TBE7 412 aa16.2■□□□□ 0.18
ERCC3-206ENST00000462306 TEKT4Q8WW24 435 aa16.2■□□□□ 0.18
ERCC3-206ENST00000462306 PABPC3Q9H361 631 aaKnown RBP16.2■□□□□ 0.18
ERCC3-206ENST00000462306 ZWILCHQ9H900 591 aa16.2■□□□□ 0.18
ERCC3-206ENST00000462306 SEMA4GQ9NTN9 838 aa16.2■□□□□ 0.18
ERCC3-206ENST00000462306 CWC15Q9P013 229 aaKnown RBP16.2■□□□□ 0.18
ERCC3-206ENST00000462306 ACTL7AQ9Y615 435 aa16.2■□□□□ 0.18
ERCC3-206ENST00000462306 NYNRINQ9P2P1 1898 aaKnown RBP16.19■□□□□ 0.18
ERCC3-206ENST00000462306 MCF2LO15068 1137 aa16.19■□□□□ 0.18
ERCC3-206ENST00000462306 MID1O15344 667 aa16.19■□□□□ 0.18
ERCC3-206ENST00000462306 MTA2O94776 668 aa16.19■□□□□ 0.18
ERCC3-206ENST00000462306 LCA5LO95447 670 aa16.19■□□□□ 0.18
ERCC3-206ENST00000462306 MPLP40238 635 aa16.19■□□□□ 0.18
ERCC3-206ENST00000462306 SERPINH1P50454 418 aaKnown RBP16.19■□□□□ 0.18
ERCC3-206ENST00000462306 ZNF135P52742 658 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms