RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 EXD3Q8N9H8 876 aa17.73■□□□□ 0.43
TOP3A-202ENST00000461127 FBXL13Q8NEE6 735 aa17.73■□□□□ 0.43
TOP3A-202ENST00000461127 UBA3Q8TBC4 463 aa17.73■□□□□ 0.43
TOP3A-202ENST00000461127 CCDC34Q96HJ3 373 aa17.73■□□□□ 0.43
TOP3A-202ENST00000461127 SERPINB11Q96P15 392 aa17.73■□□□□ 0.43
TOP3A-202ENST00000461127 USP25Q9UHP3 1055 aa17.73■□□□□ 0.43
TOP3A-202ENST00000461127 TRAF3IP3Q9Y228 551 aa17.73■□□□□ 0.43
TOP3A-202ENST00000461127 K7ESM1 405 aa17.72■□□□□ 0.43
TOP3A-202ENST00000461127 KLRC4O43908 158 aa17.72■□□□□ 0.43
TOP3A-202ENST00000461127 LTFP02788 710 aa17.72■□□□□ 0.43
TOP3A-202ENST00000461127 PRLRP16471 622 aa17.72■□□□□ 0.43
TOP3A-202ENST00000461127 TGM2P21980 687 aa17.72■□□□□ 0.43
TOP3A-202ENST00000461127 PSMC2P35998 433 aaKnown RBP17.72■□□□□ 0.43
TOP3A-202ENST00000461127 INHBCP55103 352 aa17.72■□□□□ 0.43
TOP3A-202ENST00000461127 YWHAEP62258 255 aaKnown RBP17.72■□□□□ 0.43
TOP3A-202ENST00000461127 CLN3Q13286 438 aa17.72■□□□□ 0.43
TOP3A-202ENST00000461127 ACCSLQ4AC99 568 aa17.72■□□□□ 0.43
TOP3A-202ENST00000461127 CAVIN1Q6NZI2 390 aaKnown RBP17.72■□□□□ 0.43
TOP3A-202ENST00000461127 ZCCHC8Q6NZY4 707 aaKnown RBP17.72■□□□□ 0.43
TOP3A-202ENST00000461127 NEK5Q6P3R8 708 aa17.72■□□□□ 0.43
TOP3A-202ENST00000461127 GRAMD1CQ8IYS0 662 aa17.72■□□□□ 0.43
TOP3A-202ENST00000461127 LGI2Q8N0V4 545 aa17.72■□□□□ 0.43
TOP3A-202ENST00000461127 OR13H1Q8NG92 308 aa17.72■□□□□ 0.43
TOP3A-202ENST00000461127 WDR36Q8NI36 951 aaKnown RBP17.72■□□□□ 0.43
TOP3A-202ENST00000461127 FAM174AQ8TBP5 190 aa17.72■□□□□ 0.43
TOP3A-202ENST00000461127 MYEOVQ96EZ4 313 aa17.72■□□□□ 0.43
TOP3A-202ENST00000461127 NUP62CLQ9H1M0 184 aa17.72■□□□□ 0.43
TOP3A-202ENST00000461127 DNAJC28Q9NX36 388 aa17.72■□□□□ 0.43
TOP3A-202ENST00000461127 RAB20Q9NX57 234 aa17.72■□□□□ 0.43
TOP3A-202ENST00000461127 SARDHQ9UL12 918 aa17.72■□□□□ 0.43
TOP3A-202ENST00000461127 TLR6Q9Y2C9 796 aa17.72■□□□□ 0.43
TOP3A-202ENST00000461127 ENTPD2Q9Y5L3 495 aa17.72■□□□□ 0.43
TOP3A-202ENST00000461127 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.71■□□□□ 0.43
TOP3A-202ENST00000461127 LY6G6EA0A0G2JKS1 128 aa17.71■□□□□ 0.43
TOP3A-202ENST00000461127 CPED1A4D0V7 1026 aa17.71■□□□□ 0.43
TOP3A-202ENST00000461127 ALOX15BO15296 676 aa17.71■□□□□ 0.43
TOP3A-202ENST00000461127 TCEA3O75764 348 aa17.71■□□□□ 0.43
TOP3A-202ENST00000461127 TNFSF15O95150 251 aa17.71■□□□□ 0.43
TOP3A-202ENST00000461127 GJB6O95452 261 aa17.71■□□□□ 0.43
TOP3A-202ENST00000461127 MOCS2O96007 188 aaPredicted RBP17.71■□□□□ 0.43
TOP3A-202ENST00000461127 SFTPCP11686 197 aa17.71■□□□□ 0.43
TOP3A-202ENST00000461127 HNRNPA2B1P22626 353 aaKnown RBP17.71■□□□□ 0.43
TOP3A-202ENST00000461127 RPL13P26373 211 aaKnown RBP17.71■□□□□ 0.43
TOP3A-202ENST00000461127 MXI1P50539 228 aa17.71■□□□□ 0.43
TOP3A-202ENST00000461127 ZNF177Q13360 481 aaPredicted RBP17.71■□□□□ 0.43
TOP3A-202ENST00000461127 NNTQ13423 1086 aa17.71■□□□□ 0.43
TOP3A-202ENST00000461127 KRBA2Q6ZNG9 492 aa17.71■□□□□ 0.43
TOP3A-202ENST00000461127 USP53Q70EK8 1073 aa17.71■□□□□ 0.43
TOP3A-202ENST00000461127 CLEC14AQ86T13 490 aa17.71■□□□□ 0.43
TOP3A-202ENST00000461127 DCP2Q8IU60 420 aaKnown RBP17.71■□□□□ 0.43
TOP3A-202ENST00000461127 SEMA4DQ92854 862 aa17.71■□□□□ 0.43
TOP3A-202ENST00000461127 FCRL2Q96LA5 508 aaPredicted RBP17.71■□□□□ 0.43
TOP3A-202ENST00000461127 TIGD1Q96MW7 591 aa17.71■□□□□ 0.43
TOP3A-202ENST00000461127 PPP1R9BQ96SB3 815 aa17.71■□□□□ 0.43
TOP3A-202ENST00000461127 STARD5Q9NSY2 213 aa17.71■□□□□ 0.43
TOP3A-202ENST00000461127 SERTAD1Q9UHV2 236 aa17.71■□□□□ 0.43
TOP3A-202ENST00000461127 HOOK1Q9UJC3 728 aaKnown RBP17.71■□□□□ 0.43
TOP3A-202ENST00000461127 SLC25A13Q9UJS0 675 aa17.71■□□□□ 0.43
TOP3A-202ENST00000461127 KIAA1257Q9ULG3 409 aa17.71■□□□□ 0.43
TOP3A-202ENST00000461127 ATXN7L1Q9ULK2 861 aaPredicted RBP17.71■□□□□ 0.43
TOP3A-202ENST00000461127 PPM1HQ9ULR3 514 aa17.71■□□□□ 0.43
TOP3A-202ENST00000461127 U3KQA8 63 aa17.71■□□□□ 0.43
TOP3A-202ENST00000461127 TLN1Q9Y490 2541 aaKnown RBP17.7■□□□□ 0.42
TOP3A-202ENST00000461127 A0A1W2PNU3 283 aaPredicted RBP17.7■□□□□ 0.42
TOP3A-202ENST00000461127 A0A1W2PQU0 124 aa17.7■□□□□ 0.42
TOP3A-202ENST00000461127 H3BM21 787 aa17.7■□□□□ 0.42
TOP3A-202ENST00000461127 STX10O60499 249 aa17.7■□□□□ 0.42
TOP3A-202ENST00000461127 NEBLO76041 1014 aa17.7■□□□□ 0.42
TOP3A-202ENST00000461127 APOEP02649 317 aa17.7■□□□□ 0.42
TOP3A-202ENST00000461127 ITGB2P05107 769 aa17.7■□□□□ 0.42
TOP3A-202ENST00000461127 VDRP11473 427 aa17.7■□□□□ 0.42
TOP3A-202ENST00000461127 PDGFRAP16234 1089 aa17.7■□□□□ 0.42
TOP3A-202ENST00000461127 OXCT1P55809 520 aa17.7■□□□□ 0.42
TOP3A-202ENST00000461127 NFIL3Q16649 462 aa17.7■□□□□ 0.42
TOP3A-202ENST00000461127 CDKN3Q16667 212 aa17.7■□□□□ 0.42
TOP3A-202ENST00000461127 CCDC183Q5T5S1 534 aa17.7■□□□□ 0.42
TOP3A-202ENST00000461127 EFL1Q7Z2Z2 1120 aaKnown RBP17.7■□□□□ 0.42
TOP3A-202ENST00000461127 CHSY1Q86X52 802 aa17.7■□□□□ 0.42
TOP3A-202ENST00000461127 WDR48Q8TAF3 677 aa17.7■□□□□ 0.42
TOP3A-202ENST00000461127 FRS2Q8WU20 508 aa17.7■□□□□ 0.42
TOP3A-202ENST00000461127 KLK6Q92876 244 aa17.7■□□□□ 0.42
TOP3A-202ENST00000461127 ERCC4Q92889 916 aaPredicted RBP17.7■□□□□ 0.42
TOP3A-202ENST00000461127 RNF34Q969K3 372 aa17.7■□□□□ 0.42
TOP3A-202ENST00000461127 ARRDC3Q96B67 414 aa17.7■□□□□ 0.42
TOP3A-202ENST00000461127 PRR11Q96HE9 360 aaPredicted RBP17.7■□□□□ 0.42
TOP3A-202ENST00000461127 CLSTN2Q9H4D0 955 aa17.7■□□□□ 0.42
TOP3A-202ENST00000461127 SEPT3Q9UH03 358 aa17.7■□□□□ 0.42
TOP3A-202ENST00000461127 A6NNZ2 444 aa17.69■□□□□ 0.42
TOP3A-202ENST00000461127 MCF2LO15068 1137 aa17.69■□□□□ 0.42
TOP3A-202ENST00000461127 FBXO21O94952 628 aa17.69■□□□□ 0.42
TOP3A-202ENST00000461127 ITGA2BP08514 1039 aa17.69■□□□□ 0.42
TOP3A-202ENST00000461127 RGS7P49802 495 aa17.69■□□□□ 0.42
TOP3A-202ENST00000461127 CAMK4Q16566 473 aa17.69■□□□□ 0.42
TOP3A-202ENST00000461127 PTAR1Q7Z6K3 402 aaPredicted RBP17.69■□□□□ 0.42
TOP3A-202ENST00000461127 HORMAD1Q86X24 394 aa17.69■□□□□ 0.42
TOP3A-202ENST00000461127 SGF29Q96ES7 293 aa17.69■□□□□ 0.42
TOP3A-202ENST00000461127 FZD3Q9NPG1 666 aa17.69■□□□□ 0.42
TOP3A-202ENST00000461127 FARP1Q9Y4F1 1045 aaPredicted RBP17.69■□□□□ 0.42
TOP3A-202ENST00000461127 CSNK1G3Q9Y6M4 447 aa17.69■□□□□ 0.42
TOP3A-202ENST00000461127 KIF26BQ2KJY2 2108 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms