RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 SETD3Q86TU7 594 aaPredicted RBP24.94■■□□□ 1.58
U2AF1-204ENST00000459639 CAND1Q86VP6 1230 aaKnown RBP24.94■■□□□ 1.58
U2AF1-204ENST00000459639 CNTD1Q8N815 330 aa24.94■■□□□ 1.58
U2AF1-204ENST00000459639 HJURPQ8NCD3 748 aaPredicted RBP24.94■■□□□ 1.58
U2AF1-204ENST00000459639 ZNF707Q96C28 371 aaPredicted RBP24.94■■□□□ 1.58
U2AF1-204ENST00000459639 TMEM109Q9BVC6 243 aa24.94■■□□□ 1.58
U2AF1-204ENST00000459639 CCDC195A0A1B0GUA6 201 aa24.94■■□□□ 1.58
U2AF1-204ENST00000459639 GOLGA6L10A6NI86 522 aa24.94■■□□□ 1.58
U2AF1-204ENST00000459639 GOLGA8KD6RF30 607 aa24.94■■□□□ 1.58
U2AF1-204ENST00000459639 CACNG3O60359 315 aa24.94■■□□□ 1.58
U2AF1-204ENST00000459639 PEX11BO96011 259 aa24.94■■□□□ 1.58
U2AF1-204ENST00000459639 SHBGP04278 402 aa24.94■■□□□ 1.58
U2AF1-204ENST00000459639 MLNP12872 115 aa24.94■■□□□ 1.58
U2AF1-204ENST00000459639 MAGEA3P43357 314 aa24.94■■□□□ 1.58
U2AF1-204ENST00000459639 IL10RBQ08334 325 aa24.94■■□□□ 1.58
U2AF1-204ENST00000459639 HNRNPDQ14103 355 aaKnown RBP24.94■■□□□ 1.58
U2AF1-204ENST00000459639 DNAJC21Q5F1R6 531 aaKnown RBP24.94■■□□□ 1.58
U2AF1-204ENST00000459639 CROCCP2Q86T23 111 aa24.94■■□□□ 1.58
U2AF1-204ENST00000459639 CMTM8Q8IZV2 173 aa24.94■■□□□ 1.58
U2AF1-204ENST00000459639 CPXM2Q8N436 756 aa24.94■■□□□ 1.58
U2AF1-204ENST00000459639 PDCD7Q8N8D1 485 aaKnown RBP24.94■■□□□ 1.58
U2AF1-204ENST00000459639 USP33Q8TEY7 942 aa24.94■■□□□ 1.58
U2AF1-204ENST00000459639 PYROXD1Q8WU10 500 aa24.94■■□□□ 1.58
U2AF1-204ENST00000459639 GORASP1Q9BQQ3 440 aa24.94■■□□□ 1.58
U2AF1-204ENST00000459639 CHD9Q3L8U1 2897 aa24.93■■□□□ 1.58
U2AF1-204ENST00000459639 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP24.93■■□□□ 1.58
U2AF1-204ENST00000459639 TYW5A2RUC4 315 aaKnown RBP24.93■■□□□ 1.58
U2AF1-204ENST00000459639 F5H423 210 aaPredicted RBP24.93■■□□□ 1.58
U2AF1-204ENST00000459639 LEFTY2O00292 366 aa24.93■■□□□ 1.58
U2AF1-204ENST00000459639 ZNF197O14709 1029 aa24.93■■□□□ 1.58
U2AF1-204ENST00000459639 TSPAN3O60637 253 aa24.93■■□□□ 1.58
U2AF1-204ENST00000459639 BANF1O75531 89 aa24.93■■□□□ 1.58
U2AF1-204ENST00000459639 TSHRP16473 764 aa24.93■■□□□ 1.58
U2AF1-204ENST00000459639 AVPR1AP37288 418 aa24.93■■□□□ 1.58
U2AF1-204ENST00000459639 GNA12Q03113 381 aa24.93■■□□□ 1.58
U2AF1-204ENST00000459639 ZNF177Q13360 481 aaPredicted RBP24.93■■□□□ 1.58
U2AF1-204ENST00000459639 PRPSAP1Q14558 356 aa24.93■■□□□ 1.58
U2AF1-204ENST00000459639 SLC5A9Q2M3M2 681 aa24.93■■□□□ 1.58
U2AF1-204ENST00000459639 CCDC38Q502W7 563 aa24.93■■□□□ 1.58
U2AF1-204ENST00000459639 ZNF697Q5TEC3 545 aa24.93■■□□□ 1.58
U2AF1-204ENST00000459639 KLHDC8BQ8IXV7 354 aa24.93■■□□□ 1.58
U2AF1-204ENST00000459639 ATP11CQ8NB49 1132 aa24.93■■□□□ 1.58
U2AF1-204ENST00000459639 FBXO36Q8NEA4 188 aa24.93■■□□□ 1.58
U2AF1-204ENST00000459639 ARHGEF2Q92974 986 aaKnown RBP24.93■■□□□ 1.58
U2AF1-204ENST00000459639 LRRC39Q96DD0 335 aa24.93■■□□□ 1.58
U2AF1-204ENST00000459639 PPP1R2P1Q96PQ5 205 aa24.93■■□□□ 1.58
U2AF1-204ENST00000459639 CDCA3Q99618 268 aaPredicted RBP24.93■■□□□ 1.58
U2AF1-204ENST00000459639 TBC1D30Q9Y2I9 924 aa24.93■■□□□ 1.58
U2AF1-204ENST00000459639 MYZAPP0CAP1 466 aa24.92■■□□□ 1.58
U2AF1-204ENST00000459639 BMP8BP34820 402 aa24.92■■□□□ 1.58
U2AF1-204ENST00000459639 IFNAR2P48551 515 aa24.92■■□□□ 1.58
U2AF1-204ENST00000459639 NRIP1P48552 1158 aa24.92■■□□□ 1.58
U2AF1-204ENST00000459639 RENBPP51606 427 aa24.92■■□□□ 1.58
U2AF1-204ENST00000459639 GRASPQ7Z6J2 395 aaPredicted RBP24.92■■□□□ 1.58
U2AF1-204ENST00000459639 ZNF354CQ86Y25 554 aa24.92■■□□□ 1.58
U2AF1-204ENST00000459639 ANKMY2Q8IV38 441 aa24.92■■□□□ 1.58
U2AF1-204ENST00000459639 NSMCE1Q8WV22 266 aa24.92■■□□□ 1.58
U2AF1-204ENST00000459639 WDR83Q9BRX9 315 aaKnown RBP24.92■■□□□ 1.58
U2AF1-204ENST00000459639 LRRC4CQ9HCJ2 640 aa24.92■■□□□ 1.58
U2AF1-204ENST00000459639 RBM22Q9NW64 420 aaKnown RBP eCLIP24.92■■□□□ 1.58
U2AF1-204ENST00000459639 DYNC1LI1Q9Y6G9 523 aaKnown RBP24.92■■□□□ 1.58
U2AF1-204ENST00000459639 TEX264Q9Y6I9 313 aa24.92■■□□□ 1.58
U2AF1-204ENST00000459639 CHD7Q9P2D1 2997 aa24.92■■□□□ 1.58
U2AF1-204ENST00000459639 NUP210Q8TEM1 1887 aaPredicted RBP24.92■■□□□ 1.58
U2AF1-204ENST00000459639 A0A087WUV0 522 aaPredicted RBP24.91■■□□□ 1.58
U2AF1-204ENST00000459639 ILVBLA1L0T0 632 aa24.91■■□□□ 1.58
U2AF1-204ENST00000459639 GOLGA6CA6NDK9 693 aa24.91■■□□□ 1.58
U2AF1-204ENST00000459639 EPOPA6NHQ4 379 aa24.91■■□□□ 1.58
U2AF1-204ENST00000459639 J3KR12 359 aa24.91■■□□□ 1.58
U2AF1-204ENST00000459639 PRAMEF11O60813 436 aa24.91■■□□□ 1.58
U2AF1-204ENST00000459639 NEBLO76041 1014 aa24.91■■□□□ 1.58
U2AF1-204ENST00000459639 SUN1O94901 812 aa24.91■■□□□ 1.58
U2AF1-204ENST00000459639 AP2A1O95782 977 aa24.91■■□□□ 1.58
U2AF1-204ENST00000459639 RHOCP08134 193 aa24.91■■□□□ 1.58
U2AF1-204ENST00000459639 GOLGA6DP0CG33 693 aa24.91■■□□□ 1.58
U2AF1-204ENST00000459639 ACVRL1P37023 503 aa24.91■■□□□ 1.58
U2AF1-204ENST00000459639 TNK2Q07912 1038 aa24.91■■□□□ 1.58
U2AF1-204ENST00000459639 KRT71Q3SY84 523 aa24.91■■□□□ 1.58
U2AF1-204ENST00000459639 HP1BP3Q5SSJ5 553 aaPredicted RBP24.91■■□□□ 1.58
U2AF1-204ENST00000459639 KCTD11Q693B1 232 aa24.91■■□□□ 1.58
U2AF1-204ENST00000459639 ZNF783Q6ZMS7 281 aa24.91■■□□□ 1.58
U2AF1-204ENST00000459639 UHMK1Q8TAS1 419 aaKnown RBP24.91■■□□□ 1.58
U2AF1-204ENST00000459639 ZNF419Q96HQ0 510 aaPredicted RBP24.91■■□□□ 1.58
U2AF1-204ENST00000459639 FCRL5Q96RD9 977 aa24.91■■□□□ 1.58
U2AF1-204ENST00000459639 TMBIM4Q9HC24 238 aa24.91■■□□□ 1.58
U2AF1-204ENST00000459639 GLOD4Q9HC38 313 aa24.91■■□□□ 1.58
U2AF1-204ENST00000459639 GOLGA6AQ9NYA3 693 aa24.91■■□□□ 1.58
U2AF1-204ENST00000459639 PSMD3O43242 534 aa24.91■■□□□ 1.58
U2AF1-204ENST00000459639 RNF40O75150 1001 aa24.91■■□□□ 1.58
U2AF1-204ENST00000459639 HLA-DQB2P05538 268 aa24.91■■□□□ 1.58
U2AF1-204ENST00000459639 ETFBP38117 255 aa24.91■■□□□ 1.58
U2AF1-204ENST00000459639 ELK3P41970 407 aa24.91■■□□□ 1.58
U2AF1-204ENST00000459639 NTHL1P78549 312 aa24.91■■□□□ 1.58
U2AF1-204ENST00000459639 LRRC8BQ6P9F7 803 aa24.91■■□□□ 1.58
U2AF1-204ENST00000459639 TEX26Q8N6G2 289 aa24.91■■□□□ 1.58
U2AF1-204ENST00000459639 SH3RF2Q8TEC5 729 aa24.91■■□□□ 1.58
U2AF1-204ENST00000459639 ZNF599Q96NL3 588 aa24.91■■□□□ 1.58
U2AF1-204ENST00000459639 ROPN1BQ9BZX4 212 aaPredicted RBP24.91■■□□□ 1.58
U2AF1-204ENST00000459639 SFXN1Q9H9B4 322 aa24.91■■□□□ 1.58
U2AF1-204ENST00000459639 ROPN1Q9HAT0 212 aaPredicted RBP24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms