RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 HPCAL1P37235 193 aa19.95■□□□□ 0.78
SNX27-204ENST00000458013 CDK16Q00536 496 aa19.95■□□□□ 0.78
SNX27-204ENST00000458013 GPAT3Q53EU6 434 aa19.95■□□□□ 0.78
SNX27-204ENST00000458013 CEP44Q9C0F1 390 aa19.95■□□□□ 0.78
SNX27-204ENST00000458013 TAS2R13Q9NYV9 303 aa19.95■□□□□ 0.78
SNX27-204ENST00000458013 MROH7Q68CQ1 1323 aa19.95■□□□□ 0.78
SNX27-204ENST00000458013 KANSL1LA0AUZ9 987 aa19.95■□□□□ 0.78
SNX27-204ENST00000458013 GP5P40197 560 aa19.95■□□□□ 0.78
SNX27-204ENST00000458013 XRCC4Q13426 336 aa19.95■□□□□ 0.78
SNX27-204ENST00000458013 ATP13A4Q4VNC1 1196 aa19.95■□□□□ 0.78
SNX27-204ENST00000458013 GMCL1P1Q8NEA9 526 aa19.95■□□□□ 0.78
SNX27-204ENST00000458013 EPB41L1Q9H4G0 881 aa19.95■□□□□ 0.78
SNX27-204ENST00000458013 KIAA1257Q9ULG3 409 aa19.95■□□□□ 0.78
SNX27-204ENST00000458013 RGS14O43566 566 aa19.95■□□□□ 0.78
SNX27-204ENST00000458013 VIL1P09327 827 aaKnown RBP19.95■□□□□ 0.78
SNX27-204ENST00000458013 FAM183BPQ6ZVS7 135 aa19.95■□□□□ 0.78
SNX27-204ENST00000458013 RELTQ969Z4 430 aa19.95■□□□□ 0.78
SNX27-204ENST00000458013 GBA2Q9HCG7 927 aaPredicted RBP19.95■□□□□ 0.78
SNX27-204ENST00000458013 MRPS7Q9Y2R9 242 aaKnown RBP19.95■□□□□ 0.78
SNX27-204ENST00000458013 IL6P05231 212 aa19.94■□□□□ 0.78
SNX27-204ENST00000458013 CRABP2P29373 138 aa19.94■□□□□ 0.78
SNX27-204ENST00000458013 TBX2Q13207 712 aaPredicted RBP19.94■□□□□ 0.78
SNX27-204ENST00000458013 VPS72Q15906 364 aa19.94■□□□□ 0.78
SNX27-204ENST00000458013 APOL4Q9BPW4 351 aa19.94■□□□□ 0.78
SNX27-204ENST00000458013 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.94■□□□□ 0.78
SNX27-204ENST00000458013 NOL9Q5SY16 702 aaKnown RBP19.94■□□□□ 0.78
SNX27-204ENST00000458013 PROX1Q92786 737 aa19.94■□□□□ 0.78
SNX27-204ENST00000458013 LPPQ93052 612 aa19.94■□□□□ 0.78
SNX27-204ENST00000458013 ZNHIT2Q9UHR6 403 aa19.94■□□□□ 0.78
SNX27-204ENST00000458013 MMP13P45452 471 aa19.94■□□□□ 0.78
SNX27-204ENST00000458013 IDH2P48735 452 aaKnown RBP19.94■□□□□ 0.78
SNX27-204ENST00000458013 DEFB132Q7Z7B7 95 aa19.94■□□□□ 0.78
SNX27-204ENST00000458013 C2orf73Q8N5S3 287 aaPredicted RBP19.94■□□□□ 0.78
SNX27-204ENST00000458013 RTL3Q8N8U3 475 aaKnown RBP19.94■□□□□ 0.78
SNX27-204ENST00000458013 COPS5Q92905 334 aa19.94■□□□□ 0.78
SNX27-204ENST00000458013 PCDHA3Q9Y5H8 950 aa19.94■□□□□ 0.78
SNX27-204ENST00000458013 PCDHA11Q9Y5I1 949 aa19.94■□□□□ 0.78
SNX27-204ENST00000458013 EME2A4GXA9 379 aaPredicted RBP19.94■□□□□ 0.78
SNX27-204ENST00000458013 CTPS1P17812 591 aa19.94■□□□□ 0.78
SNX27-204ENST00000458013 CPS1P31327 1500 aa19.94■□□□□ 0.78
SNX27-204ENST00000458013 CHKAP35790 457 aa19.94■□□□□ 0.78
SNX27-204ENST00000458013 IL12RB1P42701 662 aa19.94■□□□□ 0.78
SNX27-204ENST00000458013 PERM1Q5SV97 790 aa19.94■□□□□ 0.78
SNX27-204ENST00000458013 CDC42BPAQ5VT25 1732 aa19.94■□□□□ 0.78
SNX27-204ENST00000458013 C4orf19Q8IY42 314 aa19.94■□□□□ 0.78
SNX27-204ENST00000458013 TRAPPC9Q96Q05 1148 aa19.94■□□□□ 0.78
SNX27-204ENST00000458013 ULBP1Q9BZM6 244 aa19.94■□□□□ 0.78
SNX27-204ENST00000458013 L2HGDHQ9H9P8 463 aa19.94■□□□□ 0.78
SNX27-204ENST00000458013 SOHLH2Q9NX45 425 aa19.94■□□□□ 0.78
SNX27-204ENST00000458013 OPTCQ9UBM4 332 aa19.94■□□□□ 0.78
SNX27-204ENST00000458013 KLF15Q9UIH9 416 aa19.94■□□□□ 0.78
SNX27-204ENST00000458013 ZNF222Q9UK12 451 aa19.94■□□□□ 0.78
SNX27-204ENST00000458013 DDNO94850 711 aaPredicted RBP19.94■□□□□ 0.78
SNX27-204ENST00000458013 IFNA16P05015 189 aa19.94■□□□□ 0.78
SNX27-204ENST00000458013 GRIA3P42263 894 aa19.94■□□□□ 0.78
SNX27-204ENST00000458013 SLC12A3P55017 1021 aa19.94■□□□□ 0.78
SNX27-204ENST00000458013 SRSF11Q05519 484 aaKnown RBP19.94■□□□□ 0.78
SNX27-204ENST00000458013 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.94■□□□□ 0.78
SNX27-204ENST00000458013 REXO5Q96IC2 774 aaKnown RBP19.94■□□□□ 0.78
SNX27-204ENST00000458013 SPATC1LQ9H0A9 340 aa19.94■□□□□ 0.78
SNX27-204ENST00000458013 EPN2O95208 641 aa19.93■□□□□ 0.78
SNX27-204ENST00000458013 LINC00032P0C843 101 aa19.93■□□□□ 0.78
SNX27-204ENST00000458013 GZMAP12544 262 aa19.93■□□□□ 0.78
SNX27-204ENST00000458013 ZNF7P17097 686 aaPredicted RBP19.93■□□□□ 0.78
SNX27-204ENST00000458013 ADORA2AP29274 412 aa19.93■□□□□ 0.78
SNX27-204ENST00000458013 PPIDQ08752 370 aaKnown RBP19.93■□□□□ 0.78
SNX27-204ENST00000458013 ADRM1Q16186 407 aa19.93■□□□□ 0.78
SNX27-204ENST00000458013 TRMT5Q32P41 509 aaKnown RBP19.93■□□□□ 0.78
SNX27-204ENST00000458013 CDC73Q6P1J9 531 aa19.93■□□□□ 0.78
SNX27-204ENST00000458013 ZFPM1Q8IX07 1006 aa19.93■□□□□ 0.78
SNX27-204ENST00000458013 AHI1Q8N157 1196 aa19.93■□□□□ 0.78
SNX27-204ENST00000458013 C1orf50Q9BV19 199 aa19.93■□□□□ 0.78
SNX27-204ENST00000458013 TMEM39AQ9NV64 488 aa19.93■□□□□ 0.78
SNX27-204ENST00000458013 S100A3P33764 101 aa19.93■□□□□ 0.78
SNX27-204ENST00000458013 SLC6A3Q01959 620 aa19.93■□□□□ 0.78
SNX27-204ENST00000458013 ALYREFQ86V81 257 aaKnown RBP19.93■□□□□ 0.78
SNX27-204ENST00000458013 BRSK2Q8IWQ3 736 aa19.93■□□□□ 0.78
SNX27-204ENST00000458013 AGBL3Q8NEM8 1001 aa19.93■□□□□ 0.78
SNX27-204ENST00000458013 EFR3BQ9Y2G0 817 aa19.93■□□□□ 0.78
SNX27-204ENST00000458013 COQ6Q9Y2Z9 468 aa19.93■□□□□ 0.78
SNX27-204ENST00000458013 NEK3P51956 506 aa19.93■□□□□ 0.78
SNX27-204ENST00000458013 KRR1Q13601 381 aaKnown RBP19.93■□□□□ 0.78
SNX27-204ENST00000458013 ITIH5Q86UX2 942 aa19.93■□□□□ 0.78
SNX27-204ENST00000458013 DENND1CQ8IV53 801 aa19.93■□□□□ 0.78
SNX27-204ENST00000458013 EPS8L2Q9H6S3 715 aa19.93■□□□□ 0.78
SNX27-204ENST00000458013 RNF17Q9BXT8 1623 aaKnown RBP19.93■□□□□ 0.78
SNX27-204ENST00000458013 CENPXA8MT69 81 aa19.93■□□□□ 0.78
SNX27-204ENST00000458013 MTA2O94776 668 aa19.93■□□□□ 0.78
SNX27-204ENST00000458013 CDKAL1Q5VV42 579 aa19.93■□□□□ 0.78
SNX27-204ENST00000458013 CNSTQ6PJW8 725 aa19.93■□□□□ 0.78
SNX27-204ENST00000458013 GCNT7Q6ZNI0 430 aa19.93■□□□□ 0.78
SNX27-204ENST00000458013 EXOC2Q96KP1 924 aa19.93■□□□□ 0.78
SNX27-204ENST00000458013 PRRG3Q9BZD7 231 aa19.93■□□□□ 0.78
SNX27-204ENST00000458013 KIAA1683Q9H0B3 1180 aa19.93■□□□□ 0.78
SNX27-204ENST00000458013 SPIDRQ14159 915 aa19.93■□□□□ 0.78
SNX27-204ENST00000458013 BTG3Q14201 252 aaPredicted RBP19.93■□□□□ 0.78
SNX27-204ENST00000458013 ERO1BQ86YB8 467 aa19.93■□□□□ 0.78
SNX27-204ENST00000458013 OSCP1Q8WVF1 389 aa19.93■□□□□ 0.78
SNX27-204ENST00000458013 MRPL48Q96GC5 212 aaKnown RBP19.93■□□□□ 0.78
SNX27-204ENST00000458013 CLEC4AQ9UMR7 237 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms