RNA–Protein interactions for RNA: ENST00000454244.4

LMCD1-205, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-205ENST00000454244 KIF19Q2TAC6 998 aa11.04□□□□□ -0.64
LMCD1-205ENST00000454244 HLA-BQ31612 363 aa11.04□□□□□ -0.64
LMCD1-205ENST00000454244 ARL13BQ3SXY8 428 aa11.04□□□□□ -0.64
LMCD1-205ENST00000454244 POM121L1PQ3SYA9 428 aa11.04□□□□□ -0.64
LMCD1-205ENST00000454244 C6orf118Q5T5N4 469 aa11.04□□□□□ -0.64
LMCD1-205ENST00000454244 IL27RAQ6UWB1 636 aa11.04□□□□□ -0.64
LMCD1-205ENST00000454244 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.04□□□□□ -0.64
LMCD1-205ENST00000454244 DSG4Q86SJ6 1040 aa11.04□□□□□ -0.64
LMCD1-205ENST00000454244 SH2D3CQ8N5H7 860 aa11.04□□□□□ -0.64
LMCD1-205ENST00000454244 DCAF4L2Q8NA75 395 aa11.04□□□□□ -0.64
LMCD1-205ENST00000454244 ATP11CQ8NB49 1132 aa11.04□□□□□ -0.64
LMCD1-205ENST00000454244 OR7D4Q8NG98 312 aa11.04□□□□□ -0.64
LMCD1-205ENST00000454244 OR14C36Q8NHC7 312 aa11.04□□□□□ -0.64
LMCD1-205ENST00000454244 CAMK1GQ96NX5 476 aa11.04□□□□□ -0.64
LMCD1-205ENST00000454244 BPIFA3Q9BQP9 254 aa11.04□□□□□ -0.64
LMCD1-205ENST00000454244 ORAI3Q9BRQ5 295 aa11.04□□□□□ -0.64
LMCD1-205ENST00000454244 SPON2Q9BUD6 331 aa11.04□□□□□ -0.64
LMCD1-205ENST00000454244 C2orf49Q9BVC5 232 aaPredicted RBP11.04□□□□□ -0.64
LMCD1-205ENST00000454244 SELENOOQ9BVL4 669 aa11.04□□□□□ -0.64
LMCD1-205ENST00000454244 ZYG11BQ9C0D3 744 aa11.04□□□□□ -0.64
LMCD1-205ENST00000454244 OSGEPQ9NPF4 335 aa11.04□□□□□ -0.64
LMCD1-205ENST00000454244 RTN4Q9NQC3 1192 aaKnown RBP11.04□□□□□ -0.64
LMCD1-205ENST00000454244 ZNF212Q9UDV6 495 aa11.04□□□□□ -0.64
LMCD1-205ENST00000454244 SARDHQ9UL12 918 aa11.04□□□□□ -0.64
LMCD1-205ENST00000454244 HS3ST2Q9Y278 367 aa11.04□□□□□ -0.64
LMCD1-205ENST00000454244 FNDC3AQ9Y2H6 1198 aaKnown RBP11.04□□□□□ -0.64
LMCD1-205ENST00000454244 SNX11Q9Y5W9 270 aa11.04□□□□□ -0.64
LMCD1-205ENST00000454244 A0A1W2PPC4 97 aa11.03□□□□□ -0.64
LMCD1-205ENST00000454244 ILVBLA1L0T0 632 aa11.03□□□□□ -0.64
LMCD1-205ENST00000454244 C1QTNF3-AMACRE9PGA6 284 aa11.03□□□□□ -0.64
LMCD1-205ENST00000454244 MCF2LO15068 1137 aa11.03□□□□□ -0.64
LMCD1-205ENST00000454244 ALOX15BO15296 676 aa11.03□□□□□ -0.64
LMCD1-205ENST00000454244 TOP3BO95985 862 aaKnown RBP11.03□□□□□ -0.64
LMCD1-205ENST00000454244 CCDC172P0C7W6 258 aa11.03□□□□□ -0.64
LMCD1-205ENST00000454244 FERP16591 822 aa11.03□□□□□ -0.64
LMCD1-205ENST00000454244 SPINK2P20155 84 aa11.03□□□□□ -0.64
LMCD1-205ENST00000454244 GPD1P21695 349 aa11.03□□□□□ -0.64
LMCD1-205ENST00000454244 GLDCP23378 1020 aa11.03□□□□□ -0.64
LMCD1-205ENST00000454244 RRM1P23921 792 aa11.03□□□□□ -0.64
LMCD1-205ENST00000454244 RFC1P35251 1148 aaPredicted RBP11.03□□□□□ -0.64
LMCD1-205ENST00000454244 GRIA4P48058 902 aa11.03□□□□□ -0.64
LMCD1-205ENST00000454244 ZNF165P49910 485 aa11.03□□□□□ -0.64
LMCD1-205ENST00000454244 GSCP56915 257 aaPredicted RBP11.03□□□□□ -0.64
LMCD1-205ENST00000454244 FAM46CQ5VWP2 391 aa11.03□□□□□ -0.64
LMCD1-205ENST00000454244 WDR59Q6PJI9 974 aa11.03□□□□□ -0.64
LMCD1-205ENST00000454244 LINGO4Q6UY18 593 aa11.03□□□□□ -0.64
LMCD1-205ENST00000454244 MON1BQ7L1V2 547 aa11.03□□□□□ -0.64
LMCD1-205ENST00000454244 STRADAQ7RTN6 431 aa11.03□□□□□ -0.64
LMCD1-205ENST00000454244 ADAT2Q7Z6V5 191 aaKnown RBP11.03□□□□□ -0.64
LMCD1-205ENST00000454244 NAXDQ8IW45 347 aa11.03□□□□□ -0.64
LMCD1-205ENST00000454244 DRC7Q8IY82 874 aa11.03□□□□□ -0.64
LMCD1-205ENST00000454244 C3orf20Q8ND61 904 aa11.03□□□□□ -0.64
LMCD1-205ENST00000454244 PIP4K2CQ8TBX8 421 aa11.03□□□□□ -0.64
LMCD1-205ENST00000454244 FAM172AQ8WUF8 416 aa11.03□□□□□ -0.64
LMCD1-205ENST00000454244 SLC6A18Q96N87 628 aa11.03□□□□□ -0.64
LMCD1-205ENST00000454244 MAGEB5Q9BZ81 275 aa11.03□□□□□ -0.64
LMCD1-205ENST00000454244 EBF2Q9HAK2 575 aa11.03□□□□□ -0.64
LMCD1-205ENST00000454244 TM7SF3Q9NS93 570 aa11.03□□□□□ -0.64
LMCD1-205ENST00000454244 PPARGC1AQ9UBK2 798 aaKnown RBP11.03□□□□□ -0.64
LMCD1-205ENST00000454244 PPM1HQ9ULR3 514 aa11.03□□□□□ -0.64
LMCD1-205ENST00000454244 ANKRD6Q9Y2G4 727 aa11.03□□□□□ -0.64
LMCD1-205ENST00000454244 CEP192Q8TEP8 1941 aa11.03□□□□□ -0.64
LMCD1-205ENST00000454244 TPRP12270 2363 aaKnown RBP11.03□□□□□ -0.64
LMCD1-205ENST00000454244 CACNA1EQ15878 2313 aa11.02□□□□□ -0.64
LMCD1-205ENST00000454244 TBC1D3DA0A087WVF3 549 aa11.02□□□□□ -0.65
LMCD1-205ENST00000454244 TBC1D3IA0A087WXS9 549 aa11.02□□□□□ -0.65
LMCD1-205ENST00000454244 TBC1D3EA0A087X179 549 aa11.02□□□□□ -0.65
LMCD1-205ENST00000454244 TBC1D3KA0A087X1G2 549 aa11.02□□□□□ -0.65
LMCD1-205ENST00000454244 TBC1D3FA6NER0 549 aaPredicted RBP11.02□□□□□ -0.65
LMCD1-205ENST00000454244 SIGLEC16A6NMB1 481 aa11.02□□□□□ -0.65
LMCD1-205ENST00000454244 C10orf142B7Z368 130 aa11.02□□□□□ -0.65
LMCD1-205ENST00000454244 TBC1D3LB9A6J9 549 aa11.02□□□□□ -0.65
LMCD1-205ENST00000454244 FAM72CH0Y354 149 aa11.02□□□□□ -0.65
LMCD1-205ENST00000454244 CBX4O00257 560 aa11.02□□□□□ -0.65
LMCD1-205ENST00000454244 KCNK3O14649 394 aa11.02□□□□□ -0.65
LMCD1-205ENST00000454244 SMAD6O43541 496 aaKnown RBP11.02□□□□□ -0.65
LMCD1-205ENST00000454244 RTN2O75298 545 aa11.02□□□□□ -0.65
LMCD1-205ENST00000454244 TBC1D3HP0C7X1 549 aa11.02□□□□□ -0.65
LMCD1-205ENST00000454244 ZNF883P0CG24 379 aa11.02□□□□□ -0.65
LMCD1-205ENST00000454244 TNFAIP3P21580 790 aa11.02□□□□□ -0.65
LMCD1-205ENST00000454244 CCR5P51681 352 aa11.02□□□□□ -0.65
LMCD1-205ENST00000454244 HDAC4P56524 1084 aa11.02□□□□□ -0.65
LMCD1-205ENST00000454244 PPP2CBP62714 309 aa11.02□□□□□ -0.65
LMCD1-205ENST00000454244 RACK1P63244 317 aaKnown RBP11.02□□□□□ -0.65
LMCD1-205ENST00000454244 PPP2CAP67775 309 aa11.02□□□□□ -0.65
LMCD1-205ENST00000454244 NRG1Q02297 640 aaPredicted RBP11.02□□□□□ -0.65
LMCD1-205ENST00000454244 GNA12Q03113 381 aa11.02□□□□□ -0.65
LMCD1-205ENST00000454244 C1QBPQ07021 282 aaKnown RBP11.02□□□□□ -0.65
LMCD1-205ENST00000454244 CNTN1Q12860 1018 aa11.02□□□□□ -0.65
LMCD1-205ENST00000454244 HNRNPDQ14103 355 aaKnown RBP11.02□□□□□ -0.65
LMCD1-205ENST00000454244 FILIP1LQ4L180 1135 aa11.02□□□□□ -0.65
LMCD1-205ENST00000454244 KCNT1Q5JUK3 1230 aa11.02□□□□□ -0.65
LMCD1-205ENST00000454244 FAM72AQ5TYM5 149 aa11.02□□□□□ -0.65
LMCD1-205ENST00000454244 MANEALQ5VSG8 457 aa11.02□□□□□ -0.65
LMCD1-205ENST00000454244 TBC1D3GQ6DHY5 549 aa11.02□□□□□ -0.65
LMCD1-205ENST00000454244 TBC1D3CQ6IPX1 549 aa11.02□□□□□ -0.65
LMCD1-205ENST00000454244 FAM72DQ6L9T8 149 aa11.02□□□□□ -0.65
LMCD1-205ENST00000454244 RWDD4Q6NW29 188 aaKnown RBP11.02□□□□□ -0.65
LMCD1-205ENST00000454244 DNAJC24Q6P3W2 148 aa11.02□□□□□ -0.65
LMCD1-205ENST00000454244 C22orf39Q6P5X5 142 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms