RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 A0A1W2PPW3 197 aa12.61□□□□□ -0.39
UBE3B-204ENST00000449510 SPDYE2BA6NHP3 402 aa12.61□□□□□ -0.39
UBE3B-204ENST00000449510 YDJCA8MPS7 323 aa12.61□□□□□ -0.39
UBE3B-204ENST00000449510 LSM1O15116 133 aaKnown RBP12.61□□□□□ -0.39
UBE3B-204ENST00000449510 TIMM44O43615 452 aa12.61□□□□□ -0.39
UBE3B-204ENST00000449510 DAB1O75553 588 aa12.61□□□□□ -0.39
UBE3B-204ENST00000449510 KRT75O95678 551 aa12.61□□□□□ -0.39
UBE3B-204ENST00000449510 SPDYE6P0CI01 402 aa12.61□□□□□ -0.39
UBE3B-204ENST00000449510 ABCD1P33897 745 aa12.61□□□□□ -0.39
UBE3B-204ENST00000449510 PPARGP37231 505 aaPredicted RBP12.61□□□□□ -0.39
UBE3B-204ENST00000449510 CLK1P49759 484 aaKnown RBP12.61□□□□□ -0.39
UBE3B-204ENST00000449510 RAD23AP54725 363 aa12.61□□□□□ -0.39
UBE3B-204ENST00000449510 TNFAIP8L3Q5GJ75 292 aa12.61□□□□□ -0.39
UBE3B-204ENST00000449510 MPZL3Q6UWV2 235 aa12.61□□□□□ -0.39
UBE3B-204ENST00000449510 OLFML1Q6UWY5 402 aa12.61□□□□□ -0.39
UBE3B-204ENST00000449510 CCDC103Q8IW40 242 aa12.61□□□□□ -0.39
UBE3B-204ENST00000449510 ADGRF2Q8IZF7 708 aa12.61□□□□□ -0.39
UBE3B-204ENST00000449510 PLD6Q8N2A8 252 aaKnown RBP12.61□□□□□ -0.39
UBE3B-204ENST00000449510 HPS1Q92902 700 aa12.61□□□□□ -0.39
UBE3B-204ENST00000449510 P2RY11Q96G91 374 aa12.61□□□□□ -0.39
UBE3B-204ENST00000449510 ZFYVE28Q9HCC9 887 aa12.61□□□□□ -0.39
UBE3B-204ENST00000449510 SORCS3Q9UPU3 1222 aa12.61□□□□□ -0.39
UBE3B-204ENST00000449510 AKAP11Q9UKA4 1901 aa12.61□□□□□ -0.39
UBE3B-204ENST00000449510 SPATA31A5Q5VU36 1347 aa12.61□□□□□ -0.39
UBE3B-204ENST00000449510 SPATA31A7Q8IWB4 1347 aa12.61□□□□□ -0.39
UBE3B-204ENST00000449510 TOPAZ1Q8N9V7 1692 aa12.61□□□□□ -0.39
UBE3B-204ENST00000449510 TP73O15350 636 aa12.6□□□□□ -0.39
UBE3B-204ENST00000449510 TADA2AO75478 443 aa12.6□□□□□ -0.39
UBE3B-204ENST00000449510 PABPC4LP0CB38 370 aaKnown RBP12.6□□□□□ -0.39
UBE3B-204ENST00000449510 PGAM1P18669 254 aa12.6□□□□□ -0.39
UBE3B-204ENST00000449510 CES1P23141 567 aa12.6□□□□□ -0.39
UBE3B-204ENST00000449510 AKAP5P24588 427 aa12.6□□□□□ -0.39
UBE3B-204ENST00000449510 UBE3AQ05086 875 aa12.6□□□□□ -0.39
UBE3B-204ENST00000449510 MXD4Q14582 209 aaPredicted RBP12.6□□□□□ -0.39
UBE3B-204ENST00000449510 ADRM1Q16186 407 aa12.6□□□□□ -0.39
UBE3B-204ENST00000449510 FSTL4Q6MZW2 842 aa12.6□□□□□ -0.39
UBE3B-204ENST00000449510 RNF19BQ6ZMZ0 732 aa12.6□□□□□ -0.39
UBE3B-204ENST00000449510 LDB1Q86U70 411 aaPredicted RBP12.6□□□□□ -0.39
UBE3B-204ENST00000449510 VSIG10LQ86VR7 867 aa12.6□□□□□ -0.39
UBE3B-204ENST00000449510 KIAA0319LQ8IZA0 1049 aa12.6□□□□□ -0.39
UBE3B-204ENST00000449510 ZCCHC7Q8N3Z6 543 aaKnown RBP12.6□□□□□ -0.39
UBE3B-204ENST00000449510 CLEC4CQ8WTT0 213 aa12.6□□□□□ -0.39
UBE3B-204ENST00000449510 CAPSLQ8WWF8 208 aa12.6□□□□□ -0.39
UBE3B-204ENST00000449510 IDI2Q9BXS1 227 aa12.6□□□□□ -0.39
UBE3B-204ENST00000449510 CLK4Q9HAZ1 481 aaKnown RBP12.6□□□□□ -0.39
UBE3B-204ENST00000449510 PCDH12Q9NPG4 1184 aa12.6□□□□□ -0.39
UBE3B-204ENST00000449510 STK39Q9UEW8 545 aa12.6□□□□□ -0.39
UBE3B-204ENST00000449510 BTRCQ9Y297 605 aa12.6□□□□□ -0.39
UBE3B-204ENST00000449510 TRPC5OSA6NMA1 111 aa12.6□□□□□ -0.39
UBE3B-204ENST00000449510 BIRC5O15392 142 aa12.6□□□□□ -0.39
UBE3B-204ENST00000449510 CHEK2O96017 543 aa12.6□□□□□ -0.39
UBE3B-204ENST00000449510 PAMP19021 973 aa12.6□□□□□ -0.39
UBE3B-204ENST00000449510 SERPINB1P30740 379 aa12.6□□□□□ -0.39
UBE3B-204ENST00000449510 MRPS5P82675 430 aaKnown RBP12.6□□□□□ -0.39
UBE3B-204ENST00000449510 ADIGQ0VDE8 80 aa12.6□□□□□ -0.39
UBE3B-204ENST00000449510 RBBP7Q16576 425 aa12.6□□□□□ -0.39
UBE3B-204ENST00000449510 PPP1R26Q5T8A7 1209 aaPredicted RBP12.6□□□□□ -0.39
UBE3B-204ENST00000449510 PLD3Q8IV08 490 aa12.6□□□□□ -0.39
UBE3B-204ENST00000449510 OR9I1Q8NGQ6 314 aa12.6□□□□□ -0.39
UBE3B-204ENST00000449510 TBCDQ9BTW9 1192 aa12.6□□□□□ -0.39
UBE3B-204ENST00000449510 ROGDIQ9GZN7 287 aa12.6□□□□□ -0.39
UBE3B-204ENST00000449510 C2orf40Q9H1Z8 148 aa12.6□□□□□ -0.39
UBE3B-204ENST00000449510 PORCNQ9H237 461 aa12.6□□□□□ -0.39
UBE3B-204ENST00000449510 HACD3Q9P035 362 aa12.6□□□□□ -0.39
UBE3B-204ENST00000449510 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.6□□□□□ -0.39
UBE3B-204ENST00000449510 HMBSP08397 361 aa12.6□□□□□ -0.39
UBE3B-204ENST00000449510 CDH3P22223 829 aa12.6□□□□□ -0.39
UBE3B-204ENST00000449510 ZNF252P-AS1Q0IIN9 211 aa12.6□□□□□ -0.39
UBE3B-204ENST00000449510 CCDC85BQ15834 202 aaPredicted RBP12.6□□□□□ -0.39
UBE3B-204ENST00000449510 CCDC153Q494R4 210 aa12.6□□□□□ -0.39
UBE3B-204ENST00000449510 GALNT18Q6P9A2 607 aa12.6□□□□□ -0.39
UBE3B-204ENST00000449510 GPRASP2Q96D09 838 aa12.6□□□□□ -0.39
UBE3B-204ENST00000449510 HBEGFQ99075 208 aa12.6□□□□□ -0.39
UBE3B-204ENST00000449510 FRMD8P1Q9BZ68 369 aaPredicted RBP12.6□□□□□ -0.39
UBE3B-204ENST00000449510 POPDC2Q9HBU9 364 aa12.6□□□□□ -0.39
UBE3B-204ENST00000449510 EML4Q9HC35 981 aaKnown RBP12.6□□□□□ -0.39
UBE3B-204ENST00000449510 WDR70Q9NW82 654 aa12.6□□□□□ -0.39
UBE3B-204ENST00000449510 U3KQV3 271 aa12.6□□□□□ -0.39
UBE3B-204ENST00000449510 A0A0J9YVX5 310 aa12.59□□□□□ -0.39
UBE3B-204ENST00000449510 SUPT3HB4E1H0 165 aa12.59□□□□□ -0.39
UBE3B-204ENST00000449510 DHX15O43143 795 aaKnown RBP12.59□□□□□ -0.39
UBE3B-204ENST00000449510 MFN2O95140 757 aa12.59□□□□□ -0.39
UBE3B-204ENST00000449510 CNTFP26441 200 aa12.59□□□□□ -0.39
UBE3B-204ENST00000449510 PSMB9P28065 219 aa12.59□□□□□ -0.39
UBE3B-204ENST00000449510 INHBCP55103 352 aa12.59□□□□□ -0.39
UBE3B-204ENST00000449510 POLD3Q15054 466 aaPredicted RBP12.59□□□□□ -0.39
UBE3B-204ENST00000449510 TWF2Q6IBS0 349 aaKnown RBP12.59□□□□□ -0.39
UBE3B-204ENST00000449510 PMF1Q6P1K2 205 aa12.59□□□□□ -0.39
UBE3B-204ENST00000449510 UBR7Q8N806 425 aa12.59□□□□□ -0.39
UBE3B-204ENST00000449510 SLC2A14Q8TDB8 520 aa12.59□□□□□ -0.39
UBE3B-204ENST00000449510 COPS5Q92905 334 aa12.59□□□□□ -0.39
UBE3B-204ENST00000449510 RPL10LQ96L21 214 aaKnown RBP12.59□□□□□ -0.39
UBE3B-204ENST00000449510 CEP19Q96LK0 163 aa12.59□□□□□ -0.39
UBE3B-204ENST00000449510 RTKNQ9BST9 563 aa12.59□□□□□ -0.39
UBE3B-204ENST00000449510 FICDQ9BVA6 458 aa12.59□□□□□ -0.39
UBE3B-204ENST00000449510 ELOVL4Q9GZR5 314 aa12.59□□□□□ -0.39
UBE3B-204ENST00000449510 CDHR5Q9HBB8 845 aa12.59□□□□□ -0.39
UBE3B-204ENST00000449510 A0A0A0MRY4 1105 aa12.59□□□□□ -0.39
UBE3B-204ENST00000449510 ZBTB14O43829 449 aa12.59□□□□□ -0.39
UBE3B-204ENST00000449510 NCK1P16333 377 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms