RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 FRG1Q14331 258 aaKnown RBP10.57□□□□□ -0.72
CTC1-202ENST00000449476 DEFB128Q7Z7B8 93 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 C11orf96Q7Z7L8 435 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 XYLT1Q86Y38 959 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 SLC44A2Q8IWA5 706 aaPredicted RBP10.57□□□□□ -0.72
CTC1-202ENST00000449476 TNS4Q8IZW8 715 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 CASP10Q92851 521 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 NR1H4Q96RI1 486 aaPredicted RBP10.57□□□□□ -0.72
CTC1-202ENST00000449476 NIFKQ9BYG3 293 aaKnown RBP10.57□□□□□ -0.72
CTC1-202ENST00000449476 ALG9Q9H6U8 611 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 COPS7BQ9H9Q2 264 aaPredicted RBP10.57□□□□□ -0.72
CTC1-202ENST00000449476 WDR41Q9HAD4 459 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 XPNPEP1Q9NQW7 623 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 MGAT4DA6NG13 374 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 CILPO75339 1184 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 ZMPSTE24O75844 475 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 CPSF4O95639 269 aaKnown RBP10.57□□□□□ -0.72
CTC1-202ENST00000449476 PTDSS1P48651 473 aaKnown RBP10.57□□□□□ -0.72
CTC1-202ENST00000449476 PTP4A2Q12974 167 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 CSTF3Q12996 717 aaKnown RBP10.57□□□□□ -0.72
CTC1-202ENST00000449476 PRMT9Q6P2P2 845 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 TSHZ1Q6ZSZ6 1077 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 BBS7Q8IWZ6 715 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 LENG9Q96B70 501 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 CIPCQ9C0C6 399 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 MAN1C1Q9NR34 630 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 TUBGCP4Q9UGJ1 667 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 AJAP1Q9UKB5 411 aaPredicted RBP10.57□□□□□ -0.72
CTC1-202ENST00000449476 GNG14A0A1W2PPG7 69 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 STK25O00506 426 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 KRT36O76013 467 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 LTA4HP09960 611 aaKnown RBP10.57□□□□□ -0.72
CTC1-202ENST00000449476 ATP5F1P24539 256 aaPredicted RBP10.57□□□□□ -0.72
CTC1-202ENST00000449476 CD86P42081 329 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 HADHBP55084 474 aaKnown RBP10.57□□□□□ -0.72
CTC1-202ENST00000449476 C1orf127Q8N9H9 656 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 CPT1BQ92523 772 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 VPS33AQ96AX1 596 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 ASB2Q96Q27 587 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 PACSIN3Q9UKS6 424 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 CLCA2Q9UQC9 943 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 TMEM114B3SHH9 223 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 HDAC3O15379 428 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 BIRC5O15392 142 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 ALOX15P16050 662 aaPredicted RBP10.56□□□□□ -0.72
CTC1-202ENST00000449476 GRIA4P48058 902 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 RAP1GDS1P52306 607 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 VAC14Q08AM6 782 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 PACS1Q6VY07 963 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 DAW1Q8N136 415 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 B4GALNT2Q8NHY0 566 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 KCTD4Q8WVF5 259 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 LPPQ93052 612 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 OMDQ99983 421 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 TMEM109Q9BVC6 243 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 DUSP16Q9BY84 665 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 CNGB3Q9NQW8 809 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 SYBUQ9NX95 663 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 MTA2O94776 668 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 PTGIRP43119 386 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 GBE1Q04446 702 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 FASTKD3Q14CZ7 662 aaKnown RBP10.56□□□□□ -0.72
CTC1-202ENST00000449476 SLC1A5Q15758 541 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 PFKFB4Q16877 469 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 FAM98BQ52LJ0 330 aaKnown RBP10.56□□□□□ -0.72
CTC1-202ENST00000449476 RAP1GAP2Q684P5 730 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 DNAJC14Q6Y2X3 702 aaPredicted RBP10.56□□□□□ -0.72
CTC1-202ENST00000449476 STRADAQ7RTN6 431 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 GPR142Q7Z601 462 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 CMC1Q7Z7K0 106 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 SLC44A1Q8WWI5 657 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 BDH2Q9BUT1 245 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 TMEM106CQ9BVX2 250 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 LRMDAQ9H2I8 198 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 COMMD8Q9NX08 183 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 BTBD7Q9P203 1132 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 COQ4Q9Y3A0 265 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 CCDC154A6NI56 674 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 FOXO6A8MYZ6 492 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 CLOCKO15516 846 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 ARIH2O95376 493 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 PGK1P00558 417 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 LDLRP01130 860 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 WEE1P30291 646 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 ADSSP30520 456 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 TUFMP49411 452 aaKnown RBP10.56□□□□□ -0.72
CTC1-202ENST00000449476 SLC25A52Q3SY17 297 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 TJAP1Q5JTD0 557 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 PLD5Q8N7P1 536 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 C12orf50Q8NA57 414 aaPredicted RBP10.56□□□□□ -0.72
CTC1-202ENST00000449476 MYLPFQ96A32 169 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 NTPCRQ9BSD7 190 aaKnown RBP10.56□□□□□ -0.72
CTC1-202ENST00000449476 PHACTR1Q9C0D0 580 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 SNX15Q9NRS6 342 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.56□□□□□ -0.72
CTC1-202ENST00000449476 WRAP73Q9P2S5 460 aaPredicted RBP10.56□□□□□ -0.72
CTC1-202ENST00000449476 FBXO5Q9UKT4 447 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 SLC15A5A6NIM6 579 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 PAPSS1O43252 624 aaPredicted RBP10.56□□□□□ -0.72
CTC1-202ENST00000449476 WDR47O94967 919 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms