RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 SRCP12931 536 aa12.2□□□□□ -0.46
RFC4-208ENST00000447345 PSMD8P48556 350 aa12.2□□□□□ -0.46
RFC4-208ENST00000447345 TAS2R40P59535 323 aa12.2□□□□□ -0.46
RFC4-208ENST00000447345 KRT81Q14533 505 aa12.2□□□□□ -0.46
RFC4-208ENST00000447345 RAD9BQ6WBX8 426 aa12.2□□□□□ -0.46
RFC4-208ENST00000447345 RFX8Q6ZV50 586 aa12.2□□□□□ -0.46
RFC4-208ENST00000447345 Q6ZVU0 165 aa12.2□□□□□ -0.46
RFC4-208ENST00000447345 ARMCX6Q7L4S7 300 aa12.2□□□□□ -0.46
RFC4-208ENST00000447345 ALYREFQ86V81 257 aaKnown RBP12.2□□□□□ -0.46
RFC4-208ENST00000447345 TMTC1Q8IUR5 882 aa12.2□□□□□ -0.46
RFC4-208ENST00000447345 RHOT2Q8IXI1 618 aa12.2□□□□□ -0.46
RFC4-208ENST00000447345 CCDC170Q8IYT3 715 aa12.2□□□□□ -0.46
RFC4-208ENST00000447345 DEFB119Q8N690 84 aa12.2□□□□□ -0.46
RFC4-208ENST00000447345 ATP11CQ8NB49 1132 aa12.2□□□□□ -0.46
RFC4-208ENST00000447345 SUMF1Q8NBK3 374 aa12.2□□□□□ -0.46
RFC4-208ENST00000447345 NETO2Q8NC67 525 aa12.2□□□□□ -0.46
RFC4-208ENST00000447345 ACRBPQ8NEB7 543 aa12.2□□□□□ -0.46
RFC4-208ENST00000447345 PRCCQ92733 491 aaPredicted RBP12.2□□□□□ -0.46
RFC4-208ENST00000447345 SIPA1Q96FS4 1042 aa12.2□□□□□ -0.46
RFC4-208ENST00000447345 CELF6Q96J87 481 aaKnown RBP12.2□□□□□ -0.46
RFC4-208ENST00000447345 BAG1Q99933 345 aaPredicted RBP12.2□□□□□ -0.46
RFC4-208ENST00000447345 NCAPGQ9BPX3 1015 aa12.2□□□□□ -0.46
RFC4-208ENST00000447345 IMPACTQ9P2X3 320 aa12.2□□□□□ -0.46
RFC4-208ENST00000447345 NCDNQ9UBB6 729 aa12.2□□□□□ -0.46
RFC4-208ENST00000447345 SUN2Q9UH99 717 aa12.2□□□□□ -0.46
RFC4-208ENST00000447345 PCDHA13Q9Y5I0 950 aa12.2□□□□□ -0.46
RFC4-208ENST00000447345 ACTL7AQ9Y615 435 aa12.2□□□□□ -0.46
RFC4-208ENST00000447345 PLXNA2O75051 1894 aa12.2□□□□□ -0.46
RFC4-208ENST00000447345 FAM186AA6NE01 2351 aa12.19□□□□□ -0.46
RFC4-208ENST00000447345 EIF3CLB5ME19 914 aaKnown RBP12.19□□□□□ -0.46
RFC4-208ENST00000447345 H3BRJ5 948 aa12.19□□□□□ -0.46
RFC4-208ENST00000447345 MAP3K13O43283 966 aa12.19□□□□□ -0.46
RFC4-208ENST00000447345 NDUFA10O95299 355 aa12.19□□□□□ -0.46
RFC4-208ENST00000447345 IPO7O95373 1038 aaKnown RBP12.19□□□□□ -0.46
RFC4-208ENST00000447345 LCA5LO95447 670 aa12.19□□□□□ -0.46
RFC4-208ENST00000447345 ACADMP11310 421 aa12.19□□□□□ -0.46
RFC4-208ENST00000447345 FECHP22830 423 aa12.19□□□□□ -0.46
RFC4-208ENST00000447345 P2RY2P41231 377 aa12.19□□□□□ -0.46
RFC4-208ENST00000447345 NOP2P46087 812 aaKnown RBP12.19□□□□□ -0.46
RFC4-208ENST00000447345 ARF5P84085 180 aa12.19□□□□□ -0.46
RFC4-208ENST00000447345 POLD3Q15054 466 aaPredicted RBP12.19□□□□□ -0.46
RFC4-208ENST00000447345 DLG2Q15700 870 aa12.19□□□□□ -0.46
RFC4-208ENST00000447345 DPYSL2Q16555 572 aa12.19□□□□□ -0.46
RFC4-208ENST00000447345 MAP7D1Q3KQU3 841 aa12.19□□□□□ -0.46
RFC4-208ENST00000447345 ZFYVE27Q5T4F4 411 aa12.19□□□□□ -0.46
RFC4-208ENST00000447345 ZNF776Q68DI1 518 aaPredicted RBP12.19□□□□□ -0.46
RFC4-208ENST00000447345 C22orf39Q6P5X5 142 aa12.19□□□□□ -0.46
RFC4-208ENST00000447345 ZNF783Q6ZMS7 281 aa12.19□□□□□ -0.46
RFC4-208ENST00000447345 FAM124AQ86V42 546 aa12.19□□□□□ -0.46
RFC4-208ENST00000447345 STK40Q8N2I9 435 aa12.19□□□□□ -0.46
RFC4-208ENST00000447345 SH2D3CQ8N5H7 860 aa12.19□□□□□ -0.46
RFC4-208ENST00000447345 PTPRN2Q92932 1015 aa12.19□□□□□ -0.46
RFC4-208ENST00000447345 ARHGEF2Q92974 986 aaKnown RBP12.19□□□□□ -0.46
RFC4-208ENST00000447345 HMCESQ96FZ2 354 aa12.19□□□□□ -0.46
RFC4-208ENST00000447345 EIF3CQ99613 913 aaKnown RBP12.19□□□□□ -0.46
RFC4-208ENST00000447345 TNKS2Q9H2K2 1166 aa12.19□□□□□ -0.46
RFC4-208ENST00000447345 SEMA4AQ9H3S1 761 aa12.19□□□□□ -0.46
RFC4-208ENST00000447345 NOL6Q9H6R4 1146 aaKnown RBP12.19□□□□□ -0.46
RFC4-208ENST00000447345 CWC15Q9P013 229 aaKnown RBP12.19□□□□□ -0.46
RFC4-208ENST00000447345 MBD1Q9UIS9 605 aaPredicted RBP12.19□□□□□ -0.46
RFC4-208ENST00000447345 INTUQ9ULD6 942 aa12.19□□□□□ -0.46
RFC4-208ENST00000447345 MFHAS1Q9Y4C4 1052 aa12.19□□□□□ -0.46
RFC4-208ENST00000447345 HYOU1Q9Y4L1 999 aa12.19□□□□□ -0.46
RFC4-208ENST00000447345 EPN1Q9Y6I3 576 aaPredicted RBP12.19□□□□□ -0.46
RFC4-208ENST00000447345 RIF1Q5UIP0 2472 aaKnown RBP12.19□□□□□ -0.46
RFC4-208ENST00000447345 DOCK9Q9BZ29 2069 aa12.18□□□□□ -0.46
RFC4-208ENST00000447345 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.18□□□□□ -0.46
RFC4-208ENST00000447345 IGHV1OR15-9A0A0B4J2B8 117 aa12.18□□□□□ -0.46
RFC4-208ENST00000447345 RASA4BC9J798 803 aa12.18□□□□□ -0.46
RFC4-208ENST00000447345 RASA4O43374 803 aa12.18□□□□□ -0.46
RFC4-208ENST00000447345 SMAD6O43541 496 aaKnown RBP12.18□□□□□ -0.46
RFC4-208ENST00000447345 DNTTP04053 509 aa12.18□□□□□ -0.46
RFC4-208ENST00000447345 CD48P09326 243 aa12.18□□□□□ -0.46
RFC4-208ENST00000447345 TNNT1P13805 278 aa12.18□□□□□ -0.46
RFC4-208ENST00000447345 ERCC2P18074 760 aa12.18□□□□□ -0.46
RFC4-208ENST00000447345 MAN1A1P33908 653 aa12.18□□□□□ -0.46
RFC4-208ENST00000447345 HTR7P34969 479 aa12.18□□□□□ -0.46
RFC4-208ENST00000447345 ETFBP38117 255 aa12.18□□□□□ -0.46
RFC4-208ENST00000447345 ARL4AP40617 200 aa12.18□□□□□ -0.46
RFC4-208ENST00000447345 PI4KAP42356 2102 aa12.18□□□□□ -0.46
RFC4-208ENST00000447345 TPMTP51580 245 aa12.18□□□□□ -0.46
RFC4-208ENST00000447345 CDH6P55285 790 aa12.18□□□□□ -0.46
RFC4-208ENST00000447345 RPS14P62263 151 aaKnown RBP12.18□□□□□ -0.46
RFC4-208ENST00000447345 RPL6Q02878 288 aaKnown RBP12.18□□□□□ -0.46
RFC4-208ENST00000447345 MMRN1Q13201 1228 aa12.18□□□□□ -0.46
RFC4-208ENST00000447345 ELF2Q15723 593 aa12.18□□□□□ -0.46
RFC4-208ENST00000447345 HADHQ16836 314 aaKnown RBP12.18□□□□□ -0.46
RFC4-208ENST00000447345 POM121L1PQ3SYA9 428 aa12.18□□□□□ -0.46
RFC4-208ENST00000447345 PLK5Q496M5 336 aa12.18□□□□□ -0.46
RFC4-208ENST00000447345 ATP13A4Q4VNC1 1196 aa12.18□□□□□ -0.46
RFC4-208ENST00000447345 BOLA3Q53S33 107 aa12.18□□□□□ -0.46
RFC4-208ENST00000447345 C9orf64Q5T6V5 341 aa12.18□□□□□ -0.46
RFC4-208ENST00000447345 LAIR1Q6GTX8 287 aa12.18□□□□□ -0.46
RFC4-208ENST00000447345 RETSATQ6NUM9 610 aa12.18□□□□□ -0.46
RFC4-208ENST00000447345 TMEM139Q8IV31 216 aa12.18□□□□□ -0.46
RFC4-208ENST00000447345 PSTKQ8IV42 348 aaKnown RBP12.18□□□□□ -0.46
RFC4-208ENST00000447345 MMAAQ8IVH4 418 aaKnown RBP12.18□□□□□ -0.46
RFC4-208ENST00000447345 TMEFF1Q8IYR6 380 aa12.18□□□□□ -0.46
RFC4-208ENST00000447345 DCLK2Q8N568 766 aa12.18□□□□□ -0.46
RFC4-208ENST00000447345 NPWQ8N729 165 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms