RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 ATG16L2Q8NAA4 619 aa8.13□□□□□ -1.11
RIF1-205ENST00000444746 FLCNQ8NFG4 579 aa8.13□□□□□ -1.11
RIF1-205ENST00000444746 BHLHE22Q8NFJ8 381 aaPredicted RBP8.13□□□□□ -1.11
RIF1-205ENST00000444746 COL26A1Q96A83 441 aa8.13□□□□□ -1.11
RIF1-205ENST00000444746 CLPTM1LQ96KA5 538 aa8.13□□□□□ -1.11
RIF1-205ENST00000444746 MTIF3Q9H2K0 278 aaKnown RBP8.13□□□□□ -1.11
RIF1-205ENST00000444746 NRDE2Q9H7Z3 1164 aa8.13□□□□□ -1.11
RIF1-205ENST00000444746 TELO2Q9Y4R8 837 aa8.13□□□□□ -1.11
RIF1-205ENST00000444746 MANSC4A6NHS7 340 aaPredicted RBP8.12□□□□□ -1.11
RIF1-205ENST00000444746 SIGLEC16A6NMB1 481 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 PTGES3LE9PB15 166 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 HDAC4P56524 1084 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 TTLL9Q3SXZ7 439 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 IQSEC1Q6DN90 963 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 UGT3A1Q6NUS8 523 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 CRTC3Q6UUV7 619 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 KIAA2013Q8IYS2 634 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 KATNAL2Q8IYT4 538 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 DNAJB14Q8TBM8 379 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 SEMA3CQ99985 751 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 MKL2Q9ULH7 1088 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 TNFSF13BQ9Y275 285 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 MAP3K13O43283 966 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 HS6ST1O60243 411 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 KRT36O76013 467 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 NPR3P17342 541 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 ERCC2P18074 760 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 DUSP4Q13115 394 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 CA9Q16790 459 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 TATDN1Q6P1N9 297 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 ZBTB49Q6ZSB9 765 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 ZNF621Q6ZSS3 439 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 ZCCHC9Q8N567 271 aaKnown RBP8.12□□□□□ -1.11
RIF1-205ENST00000444746 CD99L2Q8TCZ2 262 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 RNF31Q96EP0 1072 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 KCTD15Q96SI1 283 aaPredicted RBP8.12□□□□□ -1.11
RIF1-205ENST00000444746 HMGXB4Q9UGU5 601 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 SLC24A2Q9UI40 661 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 APOC4-APOC2K7ER74 178 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 NKRFO15226 690 aaKnown RBP eCLIP8.12□□□□□ -1.11
RIF1-205ENST00000444746 TRIM13O60858 407 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 APOC2P02655 101 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 ACRP10323 421 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 TGFB3P10600 412 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 EPHA3P29320 983 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 SKOR1P84550 965 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 FAM151BQ6UXP7 276 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 NIPA1Q7RTP0 329 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 CCDC185Q8N715 623 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 BTBD10Q9BSF8 475 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 ADGRE3Q9BY15 652 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 RXFP1Q9HBX9 757 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 CNTNAP1P78357 1384 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 CALB2P22676 271 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 LSM3P62310 102 aaKnown RBP8.12□□□□□ -1.11
RIF1-205ENST00000444746 STX5Q13190 355 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 MAPK11Q15759 364 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 AMIGO2Q86SJ2 522 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 TBC1D19Q8N5T2 526 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 SPATA22Q8NHS9 363 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 AUTS2Q8WXX7 1259 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 ING5Q8WYH8 240 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 TNKS2Q9H2K2 1166 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 TMEM134Q9H6X4 195 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 PCDHA11Q9Y5I1 949 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 PPP2R3BQ9Y5P8 575 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 M0R3G1 203 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 TSC22D2O75157 780 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 ENTPD5O75356 428 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 SERPINE1P05121 402 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 MPOP05164 745 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 DARSP14868 501 aaKnown RBP8.12□□□□□ -1.11
RIF1-205ENST00000444746 PSMB9P28065 219 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 MAP2K5Q13163 448 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 KCTD21Q4G0X4 260 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 ABHD15Q6UXT9 468 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 TFAP2BQ92481 460 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 PRPF18Q99633 342 aaKnown RBP8.12□□□□□ -1.11
RIF1-205ENST00000444746 FOXP3Q9BZS1 431 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 PCDH12Q9NPG4 1184 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 CDV3Q9UKY7 258 aaKnown RBP8.12□□□□□ -1.11
RIF1-205ENST00000444746 PRKCGP05129 697 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 PAEPP09466 180 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 HDCP19113 662 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 CLCNKBP51801 687 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 NOMO2Q5JPE7 1267 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 USP50Q70EL3 339 aaPredicted RBP8.12□□□□□ -1.11
RIF1-205ENST00000444746 TMEM139Q8IV31 216 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 PSTKQ8IV42 348 aaKnown RBP8.12□□□□□ -1.11
RIF1-205ENST00000444746 RBBP8Q99708 897 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 PCDHGC5Q9Y5F6 944 aa8.12□□□□□ -1.11
RIF1-205ENST00000444746 RBAK-RBAKDNI3L0D1 243 aa8.11□□□□□ -1.11
RIF1-205ENST00000444746 TPBGLP0DKB5 382 aa8.11□□□□□ -1.11
RIF1-205ENST00000444746 CCNB1P14635 433 aa8.11□□□□□ -1.11
RIF1-205ENST00000444746 EFNA1P20827 205 aaPredicted RBP8.11□□□□□ -1.11
RIF1-205ENST00000444746 ZNF143P52747 638 aaPredicted RBP8.11□□□□□ -1.11
RIF1-205ENST00000444746 ELF3P78545 371 aaPredicted RBP8.11□□□□□ -1.11
RIF1-205ENST00000444746 MTFR1Q15390 333 aa8.11□□□□□ -1.11
RIF1-205ENST00000444746 ZCWPW2Q504Y3 356 aa8.11□□□□□ -1.11
RIF1-205ENST00000444746 SPANXN3Q5MJ09 141 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms