RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 ITIH5Q86UX2 942 aa10.79□□□□□ -0.68
TOP3B-210ENST00000444502 AGGF1Q8N302 714 aaeCLIP10.79□□□□□ -0.68
TOP3B-210ENST00000444502 TMA16Q96EY4 203 aaKnown RBP10.79□□□□□ -0.68
TOP3B-210ENST00000444502 PIWIL1Q96J94 861 aaKnown RBP10.79□□□□□ -0.68
TOP3B-210ENST00000444502 TRAPPC9Q96Q05 1148 aa10.79□□□□□ -0.68
TOP3B-210ENST00000444502 C16orf70Q9BSU1 422 aa10.79□□□□□ -0.68
TOP3B-210ENST00000444502 TMEM109Q9BVC6 243 aa10.79□□□□□ -0.68
TOP3B-210ENST00000444502 EMILIN2Q9BXX0 1053 aa10.79□□□□□ -0.68
TOP3B-210ENST00000444502 TASP1Q9H6P5 420 aa10.79□□□□□ -0.68
TOP3B-210ENST00000444502 CCDC22O60826 627 aa10.79□□□□□ -0.68
TOP3B-210ENST00000444502 GFAPP14136 432 aa10.79□□□□□ -0.68
TOP3B-210ENST00000444502 PSMB4P28070 264 aa10.79□□□□□ -0.68
TOP3B-210ENST00000444502 SPRP35270 261 aaPredicted RBP10.79□□□□□ -0.68
TOP3B-210ENST00000444502 ATP5C1P36542 298 aaKnown RBP10.79□□□□□ -0.68
TOP3B-210ENST00000444502 AQP5P55064 265 aa10.79□□□□□ -0.68
TOP3B-210ENST00000444502 POLD3Q15054 466 aaPredicted RBP10.79□□□□□ -0.68
TOP3B-210ENST00000444502 PRSS55Q6UWB4 352 aaPredicted RBP10.79□□□□□ -0.68
TOP3B-210ENST00000444502 ANKS3Q6ZW76 656 aa10.79□□□□□ -0.68
TOP3B-210ENST00000444502 APLFQ8IW19 511 aaPredicted RBP10.79□□□□□ -0.68
TOP3B-210ENST00000444502 HS6ST3Q8IZP7 471 aa10.79□□□□□ -0.68
TOP3B-210ENST00000444502 ZFAND2BQ8WV99 257 aa10.79□□□□□ -0.68
TOP3B-210ENST00000444502 ABHD8Q96I13 439 aa10.79□□□□□ -0.68
TOP3B-210ENST00000444502 NSL1Q96IY1 281 aa10.79□□□□□ -0.68
TOP3B-210ENST00000444502 MS4A4AQ96JQ5 239 aa10.79□□□□□ -0.68
TOP3B-210ENST00000444502 EXOC2Q96KP1 924 aa10.79□□□□□ -0.68
TOP3B-210ENST00000444502 HSFY1Q96LI6 401 aa10.79□□□□□ -0.68
TOP3B-210ENST00000444502 IL1RAPL1Q9NZN1 696 aa10.79□□□□□ -0.68
TOP3B-210ENST00000444502 SPATA7Q9P0W8 599 aa10.79□□□□□ -0.68
TOP3B-210ENST00000444502 MTO1Q9Y2Z2 717 aaKnown RBP10.79□□□□□ -0.68
TOP3B-210ENST00000444502 C2CD4BA6NLJ0 364 aa10.79□□□□□ -0.68
TOP3B-210ENST00000444502 TLR5O60602 858 aa10.79□□□□□ -0.68
TOP3B-210ENST00000444502 GHRHRQ02643 423 aa10.79□□□□□ -0.68
TOP3B-210ENST00000444502 GRAMD1BQ3KR37 738 aa10.79□□□□□ -0.68
TOP3B-210ENST00000444502 RAB6CQ53S08 254 aa10.79□□□□□ -0.68
TOP3B-210ENST00000444502 SLC45A4Q5BKX6 768 aa10.79□□□□□ -0.68
TOP3B-210ENST00000444502 MARC1Q5VT66 337 aa10.79□□□□□ -0.68
TOP3B-210ENST00000444502 PRPF39Q86UA1 669 aaKnown RBP10.79□□□□□ -0.68
TOP3B-210ENST00000444502 LRRC43Q8N309 656 aa10.79□□□□□ -0.68
TOP3B-210ENST00000444502 FNIP1Q8TF40 1166 aa10.79□□□□□ -0.68
TOP3B-210ENST00000444502 AUTS2Q8WXX7 1259 aa10.79□□□□□ -0.68
TOP3B-210ENST00000444502 ULK4Q96C45 1275 aa10.79□□□□□ -0.68
TOP3B-210ENST00000444502 PHF12Q96QT6 1004 aa10.79□□□□□ -0.68
TOP3B-210ENST00000444502 MECRQ9BV79 373 aa10.79□□□□□ -0.68
TOP3B-210ENST00000444502 RAB6CQ9H0N0 254 aa10.79□□□□□ -0.68
TOP3B-210ENST00000444502 MTSS1O43312 755 aa10.78□□□□□ -0.68
TOP3B-210ENST00000444502 BUD23O43709 281 aaKnown RBP10.78□□□□□ -0.68
TOP3B-210ENST00000444502 LMNAP02545 664 aaKnown RBP10.78□□□□□ -0.68
TOP3B-210ENST00000444502 ERVK-10P10266 1014 aa10.78□□□□□ -0.68
TOP3B-210ENST00000444502 NDUFV1P49821 464 aa10.78□□□□□ -0.68
TOP3B-210ENST00000444502 CCR3P51677 355 aa10.78□□□□□ -0.68
TOP3B-210ENST00000444502 TAF10Q12962 218 aa10.78□□□□□ -0.68
TOP3B-210ENST00000444502 DENND1CQ8IV53 801 aa10.78□□□□□ -0.68
TOP3B-210ENST00000444502 DCUN1D1Q96GG9 259 aa10.78□□□□□ -0.68
TOP3B-210ENST00000444502 ELMO2Q96JJ3 720 aa10.78□□□□□ -0.68
TOP3B-210ENST00000444502 FICDQ9BVA6 458 aa10.78□□□□□ -0.68
TOP3B-210ENST00000444502 SLC28A3Q9HAS3 691 aa10.78□□□□□ -0.68
TOP3B-210ENST00000444502 CYTH4Q9UIA0 394 aa10.78□□□□□ -0.68
TOP3B-210ENST00000444502 SLC12A4Q9UP95 1085 aa10.78□□□□□ -0.68
TOP3B-210ENST00000444502 DOLKQ9UPQ8 538 aa10.78□□□□□ -0.68
TOP3B-210ENST00000444502 UNCXA6NJT0 531 aa10.78□□□□□ -0.68
TOP3B-210ENST00000444502 ARVCFO00192 962 aa10.78□□□□□ -0.68
TOP3B-210ENST00000444502 FGBP02675 491 aa10.78□□□□□ -0.68
TOP3B-210ENST00000444502 CHRM3P20309 590 aa10.78□□□□□ -0.68
TOP3B-210ENST00000444502 TPD52P55327 224 aaPredicted RBP10.78□□□□□ -0.68
TOP3B-210ENST00000444502 SMAD3P84022 425 aaKnown RBP10.78□□□□□ -0.68
TOP3B-210ENST00000444502 POM121L1PQ3SYA9 428 aa10.78□□□□□ -0.68
TOP3B-210ENST00000444502 HSP90AA5PQ58FG0 334 aa10.78□□□□□ -0.68
TOP3B-210ENST00000444502 IZUMO2Q6UXV1 221 aa10.78□□□□□ -0.68
TOP3B-210ENST00000444502 STRA8Q7Z7C7 330 aa10.78□□□□□ -0.68
TOP3B-210ENST00000444502 SLC35B2Q8TB61 432 aa10.78□□□□□ -0.68
TOP3B-210ENST00000444502 PBXIP1Q96AQ6 731 aa10.78□□□□□ -0.68
TOP3B-210ENST00000444502 APOPT1Q96IL0 206 aa10.78□□□□□ -0.68
TOP3B-210ENST00000444502 SNX27Q96L92 541 aa10.78□□□□□ -0.68
TOP3B-210ENST00000444502 HTATIP2Q9BUP3 242 aa10.78□□□□□ -0.68
TOP3B-210ENST00000444502 TM6SF2Q9BZW4 377 aa10.78□□□□□ -0.68
TOP3B-210ENST00000444502 ANLNQ9NQW6 1124 aa10.78□□□□□ -0.68
TOP3B-210ENST00000444502 IARS2Q9NSE4 1012 aaKnown RBP10.78□□□□□ -0.68
TOP3B-210ENST00000444502 MPP6Q9NZW5 540 aa10.78□□□□□ -0.68
TOP3B-210ENST00000444502 ADAM28Q9UKQ2 775 aa10.78□□□□□ -0.68
TOP3B-210ENST00000444502 TMCO1Q9UM00 188 aa10.78□□□□□ -0.68
TOP3B-210ENST00000444502 ADAMTSL1Q8N6G6 1762 aa10.78□□□□□ -0.68
TOP3B-210ENST00000444502 NDUFB5O43674 189 aa10.78□□□□□ -0.68
TOP3B-210ENST00000444502 ACADSP16219 412 aa10.78□□□□□ -0.68
TOP3B-210ENST00000444502 FOXN2P32314 431 aa10.78□□□□□ -0.68
TOP3B-210ENST00000444502 WDR4P57081 412 aaKnown RBP10.78□□□□□ -0.68
TOP3B-210ENST00000444502 STX1BP61266 288 aa10.78□□□□□ -0.68
TOP3B-210ENST00000444502 ENPEPQ07075 957 aa10.78□□□□□ -0.68
TOP3B-210ENST00000444502 CFAP52Q8N1V2 620 aa10.78□□□□□ -0.68
TOP3B-210ENST00000444502 PHC3Q8NDX5 983 aa10.78□□□□□ -0.68
TOP3B-210ENST00000444502 OR52K1Q8NGK4 314 aa10.78□□□□□ -0.68
TOP3B-210ENST00000444502 PCDH19Q8TAB3 1148 aa10.78□□□□□ -0.68
TOP3B-210ENST00000444502 PCED1BQ96HM7 432 aa10.78□□□□□ -0.68
TOP3B-210ENST00000444502 DCLRE1BQ9H816 532 aa10.78□□□□□ -0.68
TOP3B-210ENST00000444502 DNAJC16Q9Y2G8 782 aa10.78□□□□□ -0.68
TOP3B-210ENST00000444502 MRPS23Q9Y3D9 190 aaKnown RBP10.78□□□□□ -0.68
TOP3B-210ENST00000444502 RP1L1Q8IWN7 2480 aaPredicted RBP10.78□□□□□ -0.68
TOP3B-210ENST00000444502 TM9SF1O15321 606 aa10.77□□□□□ -0.68
TOP3B-210ENST00000444502 PGM3O95394 542 aa10.77□□□□□ -0.68
TOP3B-210ENST00000444502 IQCF3P0C7M6 154 aa10.77□□□□□ -0.68
TOP3B-210ENST00000444502 EDNRBP24530 442 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 632.8 ms