RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 POM121L1PQ3SYA9 428 aa11.16□□□□□ -0.62
SF3A1-203ENST00000444440 TTC31Q49AM3 519 aaPredicted RBP11.16□□□□□ -0.62
SF3A1-203ENST00000444440 FAM72AQ5TYM5 149 aa11.16□□□□□ -0.62
SF3A1-203ENST00000444440 MANEALQ5VSG8 457 aa11.16□□□□□ -0.62
SF3A1-203ENST00000444440 FAM72DQ6L9T8 149 aa11.16□□□□□ -0.62
SF3A1-203ENST00000444440 LINGO4Q6UY18 593 aa11.16□□□□□ -0.62
SF3A1-203ENST00000444440 USP30Q70CQ3 517 aa11.16□□□□□ -0.62
SF3A1-203ENST00000444440 MON1BQ7L1V2 547 aa11.16□□□□□ -0.62
SF3A1-203ENST00000444440 ARCQ7LC44 396 aa11.16□□□□□ -0.62
SF3A1-203ENST00000444440 FAM72BQ86X60 149 aa11.16□□□□□ -0.62
SF3A1-203ENST00000444440 HDDC3Q8N4P3 179 aa11.16□□□□□ -0.62
SF3A1-203ENST00000444440 CCDC185Q8N715 623 aa11.16□□□□□ -0.62
SF3A1-203ENST00000444440 OR7D4Q8NG98 312 aa11.16□□□□□ -0.62
SF3A1-203ENST00000444440 BAP1Q92560 729 aa11.16□□□□□ -0.62
SF3A1-203ENST00000444440 FAM131CQ96AQ9 280 aa11.16□□□□□ -0.62
SF3A1-203ENST00000444440 C1orf74Q96LT6 269 aa11.16□□□□□ -0.62
SF3A1-203ENST00000444440 PCMTD1Q96MG8 357 aaPredicted RBP11.16□□□□□ -0.62
SF3A1-203ENST00000444440 MUC3BQ9H195 1237 aa11.16□□□□□ -0.62
SF3A1-203ENST00000444440 PCED1AQ9H1Q7 454 aa11.16□□□□□ -0.62
SF3A1-203ENST00000444440 SGK2Q9HBY8 427 aa11.16□□□□□ -0.62
SF3A1-203ENST00000444440 TAS2R14Q9NYV8 317 aa11.16□□□□□ -0.62
SF3A1-203ENST00000444440 SUSD2Q9UGT4 822 aa11.16□□□□□ -0.62
SF3A1-203ENST00000444440 ADAMTS1Q9UHI8 967 aa11.16□□□□□ -0.62
SF3A1-203ENST00000444440 VPS28Q9UK41 221 aa11.16□□□□□ -0.62
SF3A1-203ENST00000444440 SNX11Q9Y5W9 270 aa11.16□□□□□ -0.62
SF3A1-203ENST00000444440 DMXL2Q8TDJ6 3036 aa11.15□□□□□ -0.62
SF3A1-203ENST00000444440 ZZEF1O43149 2961 aa11.15□□□□□ -0.62
SF3A1-203ENST00000444440 UPK3BL1B0FP48 263 aa11.15□□□□□ -0.62
SF3A1-203ENST00000444440 UPK3BL2E5RIL1 263 aa11.15□□□□□ -0.62
SF3A1-203ENST00000444440 RTN2O75298 545 aa11.15□□□□□ -0.62
SF3A1-203ENST00000444440 ZNF821O75541 412 aaPredicted RBP11.15□□□□□ -0.62
SF3A1-203ENST00000444440 CD160O95971 181 aa11.15□□□□□ -0.62
SF3A1-203ENST00000444440 F9P00740 461 aa11.15□□□□□ -0.62
SF3A1-203ENST00000444440 IL1BP01584 269 aa11.15□□□□□ -0.62
SF3A1-203ENST00000444440 RRM1P23921 792 aa11.15□□□□□ -0.62
SF3A1-203ENST00000444440 RFC1P35251 1148 aaPredicted RBP11.15□□□□□ -0.62
SF3A1-203ENST00000444440 VASPP50552 380 aaPredicted RBP11.15□□□□□ -0.62
SF3A1-203ENST00000444440 HDAC4P56524 1084 aa11.15□□□□□ -0.62
SF3A1-203ENST00000444440 SHC2P98077 582 aa11.15□□□□□ -0.62
SF3A1-203ENST00000444440 SULT2A1Q06520 285 aa11.15□□□□□ -0.62
SF3A1-203ENST00000444440 FOXC1Q12948 553 aa11.15□□□□□ -0.62
SF3A1-203ENST00000444440 ELAVL3Q14576 367 aaKnown RBP11.15□□□□□ -0.62
SF3A1-203ENST00000444440 IQCB1Q15051 598 aa11.15□□□□□ -0.62
SF3A1-203ENST00000444440 HLA-BQ31612 363 aa11.15□□□□□ -0.62
SF3A1-203ENST00000444440 ACCSLQ4AC99 568 aa11.15□□□□□ -0.62
SF3A1-203ENST00000444440 KIAA0895LQ68EN5 471 aa11.15□□□□□ -0.62
SF3A1-203ENST00000444440 SND1Q7KZF4 910 aaKnown RBP eCLIP11.15□□□□□ -0.62
SF3A1-203ENST00000444440 IRF2BP2Q7Z5L9 587 aa11.15□□□□□ -0.62
SF3A1-203ENST00000444440 PHF13Q86YI8 300 aaPredicted RBP11.15□□□□□ -0.62
SF3A1-203ENST00000444440 GANCQ8TET4 914 aa11.15□□□□□ -0.62
SF3A1-203ENST00000444440 CENPIQ92674 756 aaPredicted RBP11.15□□□□□ -0.62
SF3A1-203ENST00000444440 SLC6A18Q96N87 628 aa11.15□□□□□ -0.62
SF3A1-203ENST00000444440 NAP1L5Q96NT1 182 aaPredicted RBP11.15□□□□□ -0.62
SF3A1-203ENST00000444440 HAPLN3Q96S86 360 aa11.15□□□□□ -0.62
SF3A1-203ENST00000444440 AGPAT1Q99943 283 aa11.15□□□□□ -0.62
SF3A1-203ENST00000444440 BPIFA3Q9BQP9 254 aa11.15□□□□□ -0.62
SF3A1-203ENST00000444440 GAREM1Q9H706 876 aa11.15□□□□□ -0.62
SF3A1-203ENST00000444440 RTN4Q9NQC3 1192 aaKnown RBP11.15□□□□□ -0.62
SF3A1-203ENST00000444440 ADAM22Q9P0K1 906 aa11.15□□□□□ -0.62
SF3A1-203ENST00000444440 SLC25A13Q9UJS0 675 aa11.15□□□□□ -0.62
SF3A1-203ENST00000444440 ANGPTL2Q9UKU9 493 aa11.15□□□□□ -0.62
SF3A1-203ENST00000444440 SCML1Q9UN30 329 aa11.15□□□□□ -0.62
SF3A1-203ENST00000444440 HS3ST2Q9Y278 367 aa11.15□□□□□ -0.62
SF3A1-203ENST00000444440 DAAM1Q9Y4D1 1078 aa11.15□□□□□ -0.62
SF3A1-203ENST00000444440 LAMA5O15230 3695 aa11.15□□□□□ -0.62
SF3A1-203ENST00000444440 LRP4O75096 1905 aa11.15□□□□□ -0.62
SF3A1-203ENST00000444440 A0A1W2PPC4 97 aa11.14□□□□□ -0.63
SF3A1-203ENST00000444440 CCP110O43303 1012 aa11.14□□□□□ -0.63
SF3A1-203ENST00000444440 BNIP3LO60238 219 aa11.14□□□□□ -0.63
SF3A1-203ENST00000444440 CBFA2T3O75081 653 aa11.14□□□□□ -0.63
SF3A1-203ENST00000444440 ZMPSTE24O75844 475 aa11.14□□□□□ -0.63
SF3A1-203ENST00000444440 GOT1P17174 413 aa11.14□□□□□ -0.63
SF3A1-203ENST00000444440 C5AR1P21730 350 aa11.14□□□□□ -0.63
SF3A1-203ENST00000444440 CD27P26842 260 aa11.14□□□□□ -0.63
SF3A1-203ENST00000444440 ACVRL1P37023 503 aa11.14□□□□□ -0.63
SF3A1-203ENST00000444440 PTPN9P43378 593 aa11.14□□□□□ -0.63
SF3A1-203ENST00000444440 TAS2R38P59533 333 aa11.14□□□□□ -0.63
SF3A1-203ENST00000444440 RPL7AP62424 266 aaKnown RBP11.14□□□□□ -0.63
SF3A1-203ENST00000444440 ARF5P84085 180 aa11.14□□□□□ -0.63
SF3A1-203ENST00000444440 OGDHQ02218 1023 aa11.14□□□□□ -0.63
SF3A1-203ENST00000444440 CNTN1Q12860 1018 aa11.14□□□□□ -0.63
SF3A1-203ENST00000444440 KIF19Q2TAC6 998 aa11.14□□□□□ -0.63
SF3A1-203ENST00000444440 PPP1R15BQ5SWA1 713 aa11.14□□□□□ -0.63
SF3A1-203ENST00000444440 AGBL4Q5VU57 503 aa11.14□□□□□ -0.63
SF3A1-203ENST00000444440 WDR59Q6PJI9 974 aa11.14□□□□□ -0.63
SF3A1-203ENST00000444440 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.14□□□□□ -0.63
SF3A1-203ENST00000444440 TRIM72Q6ZMU5 477 aa11.14□□□□□ -0.63
SF3A1-203ENST00000444440 SETD3Q86TU7 594 aaPredicted RBP11.14□□□□□ -0.63
SF3A1-203ENST00000444440 NLRP14Q86W24 1093 aa11.14□□□□□ -0.63
SF3A1-203ENST00000444440 DRC7Q8IY82 874 aa11.14□□□□□ -0.63
SF3A1-203ENST00000444440 PYROXD2Q8N2H3 581 aa11.14□□□□□ -0.63
SF3A1-203ENST00000444440 DCAF4L2Q8NA75 395 aa11.14□□□□□ -0.63
SF3A1-203ENST00000444440 CHST14Q8NCH0 376 aa11.14□□□□□ -0.63
SF3A1-203ENST00000444440 MSANTD4Q8NCY6 345 aa11.14□□□□□ -0.63
SF3A1-203ENST00000444440 OR2A12Q8NGT7 310 aa11.14□□□□□ -0.63
SF3A1-203ENST00000444440 OR14C36Q8NHC7 312 aa11.14□□□□□ -0.63
SF3A1-203ENST00000444440 PIP4K2CQ8TBX8 421 aa11.14□□□□□ -0.63
SF3A1-203ENST00000444440 FAM172AQ8WUF8 416 aa11.14□□□□□ -0.63
SF3A1-203ENST00000444440 VOPP1Q96AW1 172 aa11.14□□□□□ -0.63
SF3A1-203ENST00000444440 ARRDC3Q96B67 414 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms