RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 ACCSLQ4AC99 568 aa11.09□□□□□ -0.63
HDAC6-211ENST00000443563 KCNT1Q5JUK3 1230 aa11.09□□□□□ -0.63
HDAC6-211ENST00000443563 KIAA1211LQ6NV74 962 aa11.09□□□□□ -0.63
HDAC6-211ENST00000443563 RFX8Q6ZV50 586 aa11.09□□□□□ -0.63
HDAC6-211ENST00000443563 POLNQ7Z5Q5 900 aa11.09□□□□□ -0.63
HDAC6-211ENST00000443563 DSG4Q86SJ6 1040 aa11.09□□□□□ -0.63
HDAC6-211ENST00000443563 ZNF354CQ86Y25 554 aa11.09□□□□□ -0.63
HDAC6-211ENST00000443563 UMODL1-AS1Q8N2C9 162 aa11.09□□□□□ -0.63
HDAC6-211ENST00000443563 SH2D3CQ8N5H7 860 aa11.09□□□□□ -0.63
HDAC6-211ENST00000443563 ATP11CQ8NB49 1132 aa11.09□□□□□ -0.63
HDAC6-211ENST00000443563 OR7D4Q8NG98 312 aa11.09□□□□□ -0.63
HDAC6-211ENST00000443563 OR52K2Q8NGK3 314 aa11.09□□□□□ -0.63
HDAC6-211ENST00000443563 ARHGEF2Q92974 986 aaKnown RBP11.09□□□□□ -0.63
HDAC6-211ENST00000443563 SIPA1Q96FS4 1042 aa11.09□□□□□ -0.63
HDAC6-211ENST00000443563 MYO19Q96H55 970 aa11.09□□□□□ -0.63
HDAC6-211ENST00000443563 MRGPRX1Q96LB2 322 aa11.09□□□□□ -0.63
HDAC6-211ENST00000443563 PSMB7Q99436 277 aa11.09□□□□□ -0.63
HDAC6-211ENST00000443563 ACE2Q9BYF1 805 aaPredicted RBP11.09□□□□□ -0.63
HDAC6-211ENST00000443563 TPSD1Q9BZJ3 242 aa11.09□□□□□ -0.63
HDAC6-211ENST00000443563 VPS51Q9UID3 782 aa11.09□□□□□ -0.63
HDAC6-211ENST00000443563 SCML1Q9UN30 329 aa11.09□□□□□ -0.63
HDAC6-211ENST00000443563 HS3ST2Q9Y278 367 aa11.09□□□□□ -0.63
HDAC6-211ENST00000443563 TMEM110-MUSTN1A8MSY1 372 aa11.08□□□□□ -0.64
HDAC6-211ENST00000443563 BTNL10A8MVZ5 291 aa11.08□□□□□ -0.64
HDAC6-211ENST00000443563 TTC34A8MYJ7 566 aa11.08□□□□□ -0.64
HDAC6-211ENST00000443563 ALOX15BO15296 676 aa11.08□□□□□ -0.64
HDAC6-211ENST00000443563 HRO43593 1189 aa11.08□□□□□ -0.64
HDAC6-211ENST00000443563 KDELR3O43731 214 aa11.08□□□□□ -0.64
HDAC6-211ENST00000443563 RHOBTB1O94844 696 aa11.08□□□□□ -0.64
HDAC6-211ENST00000443563 DNTTP04053 509 aa11.08□□□□□ -0.64
HDAC6-211ENST00000443563 SRCP12931 536 aa11.08□□□□□ -0.64
HDAC6-211ENST00000443563 ERCC2P18074 760 aa11.08□□□□□ -0.64
HDAC6-211ENST00000443563 OXTRP30559 389 aa11.08□□□□□ -0.64
HDAC6-211ENST00000443563 P2RY2P41231 377 aa11.08□□□□□ -0.64
HDAC6-211ENST00000443563 STK19P49842 368 aaPredicted RBP11.08□□□□□ -0.64
HDAC6-211ENST00000443563 MRE11P49959 708 aa11.08□□□□□ -0.64
HDAC6-211ENST00000443563 VAV2P52735 878 aa11.08□□□□□ -0.64
HDAC6-211ENST00000443563 COPAP53621 1224 aa11.08□□□□□ -0.64
HDAC6-211ENST00000443563 PDK2Q15119 407 aa11.08□□□□□ -0.64
HDAC6-211ENST00000443563 DLG2Q15700 870 aa11.08□□□□□ -0.64
HDAC6-211ENST00000443563 ELF2Q15723 593 aa11.08□□□□□ -0.64
HDAC6-211ENST00000443563 IFI16Q16666 785 aaKnown RBP11.08□□□□□ -0.64
HDAC6-211ENST00000443563 ODF2Q5BJF6 829 aa11.08□□□□□ -0.64
HDAC6-211ENST00000443563 ZFYVE27Q5T4F4 411 aa11.08□□□□□ -0.64
HDAC6-211ENST00000443563 DAB2IPQ5VWQ8 1189 aa11.08□□□□□ -0.64
HDAC6-211ENST00000443563 ZNF776Q68DI1 518 aaPredicted RBP11.08□□□□□ -0.64
HDAC6-211ENST00000443563 KIAA1324Q6UXG2 1013 aaKnown RBP11.08□□□□□ -0.64
HDAC6-211ENST00000443563 RAD9BQ6WBX8 426 aa11.08□□□□□ -0.64
HDAC6-211ENST00000443563 SLC36A4Q6YBV0 504 aa11.08□□□□□ -0.64
HDAC6-211ENST00000443563 KIAA1328Q86T90 577 aa11.08□□□□□ -0.64
HDAC6-211ENST00000443563 TMPRSS6Q8IU80 811 aa11.08□□□□□ -0.64
HDAC6-211ENST00000443563 TMEM139Q8IV31 216 aa11.08□□□□□ -0.64
HDAC6-211ENST00000443563 KCTD6Q8NC69 237 aa11.08□□□□□ -0.64
HDAC6-211ENST00000443563 FAM71BQ8TC56 605 aa11.08□□□□□ -0.64
HDAC6-211ENST00000443563 CASKIN2Q8WXE0 1202 aa11.08□□□□□ -0.64
HDAC6-211ENST00000443563 CEP44Q9C0F1 390 aa11.08□□□□□ -0.64
HDAC6-211ENST00000443563 PRSS16Q9NQE7 514 aa11.08□□□□□ -0.64
HDAC6-211ENST00000443563 NDFIP2Q9NV92 336 aa11.08□□□□□ -0.64
HDAC6-211ENST00000443563 CWC15Q9P013 229 aaKnown RBP11.08□□□□□ -0.64
HDAC6-211ENST00000443563 SLCO3A1Q9UIG8 710 aa11.08□□□□□ -0.64
HDAC6-211ENST00000443563 ARHGAP42A6NI28 874 aa11.07□□□□□ -0.64
HDAC6-211ENST00000443563 RASA4BC9J798 803 aa11.07□□□□□ -0.64
HDAC6-211ENST00000443563 MAP3K13O43283 966 aa11.07□□□□□ -0.64
HDAC6-211ENST00000443563 RASA4O43374 803 aa11.07□□□□□ -0.64
HDAC6-211ENST00000443563 SPOPO43791 374 aa11.07□□□□□ -0.64
HDAC6-211ENST00000443563 SNAP91O60641 907 aa11.07□□□□□ -0.64
HDAC6-211ENST00000443563 SIN3BO75182 1162 aa11.07□□□□□ -0.64
HDAC6-211ENST00000443563 ADH1BP00325 375 aa11.07□□□□□ -0.64
HDAC6-211ENST00000443563 C7P10643 843 aa11.07□□□□□ -0.64
HDAC6-211ENST00000443563 TCF4P15884 667 aa11.07□□□□□ -0.64
HDAC6-211ENST00000443563 SERPINB6P35237 376 aa11.07□□□□□ -0.64
HDAC6-211ENST00000443563 GJC1P36383 396 aa11.07□□□□□ -0.64
HDAC6-211ENST00000443563 ACVRL1P37023 503 aa11.07□□□□□ -0.64
HDAC6-211ENST00000443563 RECQLP46063 649 aaPredicted RBP11.07□□□□□ -0.64
HDAC6-211ENST00000443563 SERPINH1P50454 418 aaKnown RBP11.07□□□□□ -0.64
HDAC6-211ENST00000443563 CDH6P55285 790 aa11.07□□□□□ -0.64
HDAC6-211ENST00000443563 KIF5AQ12840 1032 aa11.07□□□□□ -0.64
HDAC6-211ENST00000443563 DPYSQ14117 519 aa11.07□□□□□ -0.64
HDAC6-211ENST00000443563 ELAVL3Q14576 367 aaKnown RBP11.07□□□□□ -0.64
HDAC6-211ENST00000443563 TTC31Q49AM3 519 aaPredicted RBP11.07□□□□□ -0.64
HDAC6-211ENST00000443563 SPDYCQ5MJ68 293 aa11.07□□□□□ -0.64
HDAC6-211ENST00000443563 C9orf64Q5T6V5 341 aa11.07□□□□□ -0.64
HDAC6-211ENST00000443563 LRRC38Q5VT99 294 aa11.07□□□□□ -0.64
HDAC6-211ENST00000443563 LAIR1Q6GTX8 287 aa11.07□□□□□ -0.64
HDAC6-211ENST00000443563 TMCO3Q6UWJ1 677 aa11.07□□□□□ -0.64
HDAC6-211ENST00000443563 PRR23BQ6ZRT6 265 aa11.07□□□□□ -0.64
HDAC6-211ENST00000443563 RHOT1Q8IXI2 618 aa11.07□□□□□ -0.64
HDAC6-211ENST00000443563 PCDH20Q8N6Y1 951 aaKnown RBP11.07□□□□□ -0.64
HDAC6-211ENST00000443563 ZNF366Q8N895 744 aa11.07□□□□□ -0.64
HDAC6-211ENST00000443563 FRS2Q8WU20 508 aa11.07□□□□□ -0.64
HDAC6-211ENST00000443563 OR8D1Q8WZ84 308 aa11.07□□□□□ -0.64
HDAC6-211ENST00000443563 PTPRN2Q92932 1015 aa11.07□□□□□ -0.64
HDAC6-211ENST00000443563 ISG20Q96AZ6 181 aaKnown RBP11.07□□□□□ -0.64
HDAC6-211ENST00000443563 ZC3H10Q96K80 434 aaKnown RBP11.07□□□□□ -0.64
HDAC6-211ENST00000443563 CSPG4P5Q96PW8 444 aa11.07□□□□□ -0.64
HDAC6-211ENST00000443563 ZNF670Q9BS34 389 aa11.07□□□□□ -0.64
HDAC6-211ENST00000443563 MKRN2Q9H000 416 aaKnown RBP11.07□□□□□ -0.64
HDAC6-211ENST00000443563 RSPH9Q9H1X1 276 aaPredicted RBP11.07□□□□□ -0.64
HDAC6-211ENST00000443563 PCDH18Q9HCL0 1135 aa11.07□□□□□ -0.64
HDAC6-211ENST00000443563 ITM2CQ9NQX7 267 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms