RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 CTBP1Q13363 440 aa22.77■■□□□ 1.24
CTDSPL-206ENST00000443503 SKIV2LQ15477 1246 aaKnown RBP22.77■■□□□ 1.24
CTDSPL-206ENST00000443503 DDR2Q16832 855 aa22.77■■□□□ 1.24
CTDSPL-206ENST00000443503 C11orf96Q7Z7L8 435 aa22.77■■□□□ 1.24
CTDSPL-206ENST00000443503 P3H2Q8IVL5 708 aa22.77■■□□□ 1.24
CTDSPL-206ENST00000443503 SEMA3CQ99985 751 aa22.77■■□□□ 1.24
CTDSPL-206ENST00000443503 SLC27A5Q9Y2P5 690 aa22.77■■□□□ 1.24
CTDSPL-206ENST00000443503 CNTNAP1P78357 1384 aa22.77■■□□□ 1.24
CTDSPL-206ENST00000443503 SLC2A4P14672 509 aa22.77■■□□□ 1.23
CTDSPL-206ENST00000443503 ME2P23368 584 aa22.77■■□□□ 1.23
CTDSPL-206ENST00000443503 ACMSDQ8TDX5 336 aa22.77■■□□□ 1.23
CTDSPL-206ENST00000443503 FCRL2Q96LA5 508 aaPredicted RBP22.77■■□□□ 1.23
CTDSPL-206ENST00000443503 OMDQ99983 421 aa22.77■■□□□ 1.23
CTDSPL-206ENST00000443503 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.77■■□□□ 1.232e-7■■□□□ 11.5
CTDSPL-206ENST00000443503 UNGP13051 313 aaPredicted RBP22.76■■□□□ 1.23
CTDSPL-206ENST00000443503 PRIM2P49643 509 aa22.76■■□□□ 1.23
CTDSPL-206ENST00000443503 PKNOX1P55347 436 aa22.76■■□□□ 1.23
CTDSPL-206ENST00000443503 SLC10A6Q3KNW5 377 aa22.76■■□□□ 1.23
CTDSPL-206ENST00000443503 FNDC5Q8NAU1 212 aa22.76■■□□□ 1.23
CTDSPL-206ENST00000443503 SUFUQ9UMX1 484 aa22.76■■□□□ 1.23
CTDSPL-206ENST00000443503 PCDHB12Q9Y5F1 795 aa22.76■■□□□ 1.23
CTDSPL-206ENST00000443503 A8MX80 341 aa22.76■■□□□ 1.23
CTDSPL-206ENST00000443503 RAG1P15918 1043 aa22.76■■□□□ 1.23
CTDSPL-206ENST00000443503 PTGIRP43119 386 aa22.76■■□□□ 1.23
CTDSPL-206ENST00000443503 CYP51A1Q16850 503 aa22.76■■□□□ 1.23
CTDSPL-206ENST00000443503 SLC25A3Q00325 362 aa22.76■■□□□ 1.23
CTDSPL-206ENST00000443503 MTA1Q13330 715 aa22.76■■□□□ 1.23
CTDSPL-206ENST00000443503 TAF5Q15542 800 aa22.76■■□□□ 1.23
CTDSPL-206ENST00000443503 CYP2R1Q6VVX0 501 aa22.76■■□□□ 1.23
CTDSPL-206ENST00000443503 KCTD4Q8WVF5 259 aa22.76■■□□□ 1.23
CTDSPL-206ENST00000443503 NDNQ99608 321 aa22.76■■□□□ 1.23
CTDSPL-206ENST00000443503 RNPEPL1Q9HAU8 725 aa22.76■■□□□ 1.23
CTDSPL-206ENST00000443503 MPP6Q9NZW5 540 aa22.76■■□□□ 1.23
CTDSPL-206ENST00000443503 POLG2Q9UHN1 485 aa22.76■■□□□ 1.23
CTDSPL-206ENST00000443503 FBXO5Q9UKT4 447 aa22.76■■□□□ 1.23
CTDSPL-206ENST00000443503 LRRC37A3O60309 1634 aa22.76■■□□□ 1.23
CTDSPL-206ENST00000443503 KANSL1LA0AUZ9 987 aa22.75■■□□□ 1.23
CTDSPL-206ENST00000443503 ZNF516Q92618 1163 aa22.75■■□□□ 1.23
CTDSPL-206ENST00000443503 ZYG11BQ9C0D3 744 aa22.75■■□□□ 1.23
CTDSPL-206ENST00000443503 PARVBQ9HBI1 364 aa22.75■■□□□ 1.23
CTDSPL-206ENST00000443503 PACS1Q6VY07 963 aa22.75■■□□□ 1.23
CTDSPL-206ENST00000443503 LRRC74BQ6ZQY2 392 aa22.75■■□□□ 1.23
CTDSPL-206ENST00000443503 MAN1C1Q9NR34 630 aa22.75■■□□□ 1.23
CTDSPL-206ENST00000443503 APPL1Q9UKG1 709 aa22.75■■□□□ 1.23
CTDSPL-206ENST00000443503 NDUFAF1Q9Y375 327 aa22.75■■□□□ 1.23
CTDSPL-206ENST00000443503 ADGRA3Q8IWK6 1321 aa22.75■■□□□ 1.23
CTDSPL-206ENST00000443503 SYNCRIPO60506 623 aaKnown RBP22.75■■□□□ 1.23
CTDSPL-206ENST00000443503 CABYRO75952 493 aa22.75■■□□□ 1.23
CTDSPL-206ENST00000443503 VNN1O95497 513 aa22.75■■□□□ 1.23
CTDSPL-206ENST00000443503 PRKAR2AP13861 404 aaKnown RBP22.75■■□□□ 1.23
CTDSPL-206ENST00000443503 RGMBQ6NW40 437 aa22.75■■□□□ 1.23
CTDSPL-206ENST00000443503 ZNF398Q8TD17 642 aa22.75■■□□□ 1.23
CTDSPL-206ENST00000443503 TRIM17Q9Y577 477 aa22.75■■□□□ 1.23
CTDSPL-206ENST00000443503 FLT3LGP49771 235 aa22.75■■□□□ 1.23
CTDSPL-206ENST00000443503 BOP1Q14137 746 aaKnown RBP22.75■■□□□ 1.23
CTDSPL-206ENST00000443503 CRYMQ14894 314 aa22.75■■□□□ 1.23
CTDSPL-206ENST00000443503 PFKFB4Q16877 469 aa22.75■■□□□ 1.23
CTDSPL-206ENST00000443503 ANKRD22Q5VYY1 191 aa22.75■■□□□ 1.23
CTDSPL-206ENST00000443503 ENTPD5O75356 428 aa22.74■■□□□ 1.23
CTDSPL-206ENST00000443503 ZMPSTE24O75844 475 aa22.74■■□□□ 1.23
CTDSPL-206ENST00000443503 USP1O94782 785 aa22.74■■□□□ 1.23
CTDSPL-206ENST00000443503 TBCELQ5QJ74 424 aa22.74■■□□□ 1.23
CTDSPL-206ENST00000443503 SEPHS2Q99611 448 aa22.74■■□□□ 1.23
CTDSPL-206ENST00000443503 RNF208Q9H0X6 261 aa22.74■■□□□ 1.23
CTDSPL-206ENST00000443503 GRHL1Q9NZI5 618 aa22.74■■□□□ 1.23
CTDSPL-206ENST00000443503 KRT6AP02538 564 aa22.74■■□□□ 1.23
CTDSPL-206ENST00000443503 KRT6BP04259 564 aa22.74■■□□□ 1.23
CTDSPL-206ENST00000443503 HOXB8P17481 243 aaPredicted RBP22.74■■□□□ 1.23
CTDSPL-206ENST00000443503 KRT6CP48668 564 aa22.74■■□□□ 1.23
CTDSPL-206ENST00000443503 TUSC3Q13454 348 aa22.74■■□□□ 1.23
CTDSPL-206ENST00000443503 DNAJC14Q6Y2X3 702 aaPredicted RBP22.74■■□□□ 1.23
CTDSPL-206ENST00000443503 SLC26A9Q7LBE3 791 aa22.74■■□□□ 1.23
CTDSPL-206ENST00000443503 SLC44A2Q8IWA5 706 aaPredicted RBP22.74■■□□□ 1.23
CTDSPL-206ENST00000443503 C12orf50Q8NA57 414 aaPredicted RBP22.74■■□□□ 1.23
CTDSPL-206ENST00000443503 GPR152Q8TDT2 470 aa22.74■■□□□ 1.23
CTDSPL-206ENST00000443503 SPATA16Q9BXB7 569 aa22.74■■□□□ 1.23
CTDSPL-206ENST00000443503 ADAM28Q9UKQ2 775 aa22.74■■□□□ 1.23
CTDSPL-206ENST00000443503 PACSIN3Q9UKS6 424 aa22.74■■□□□ 1.23
CTDSPL-206ENST00000443503 LRCH1Q9Y2L9 728 aa22.74■■□□□ 1.23
CTDSPL-206ENST00000443503 SAC3D1A6NKF1 404 aa22.74■■□□□ 1.23
CTDSPL-206ENST00000443503 BCL2L1Q07817 233 aa22.74■■□□□ 1.23
CTDSPL-206ENST00000443503 ARCQ7LC44 396 aa22.74■■□□□ 1.23
CTDSPL-206ENST00000443503 UROC1Q96N76 676 aa22.74■■□□□ 1.23
CTDSPL-206ENST00000443503 SNX15Q9NRS6 342 aa22.74■■□□□ 1.23
CTDSPL-206ENST00000443503 CATSPERZQ9NTU4 200 aa22.74■■□□□ 1.23
CTDSPL-206ENST00000443503 INPP4BO15327 924 aa22.74■■□□□ 1.23
CTDSPL-206ENST00000443503 LTA4HP09960 611 aaKnown RBP22.74■■□□□ 1.23
CTDSPL-206ENST00000443503 HOXD13P35453 343 aa22.74■■□□□ 1.23
CTDSPL-206ENST00000443503 SLC1A5Q15758 541 aa22.74■■□□□ 1.23
CTDSPL-206ENST00000443503 PGS1Q32NB8 556 aa22.74■■□□□ 1.23
CTDSPL-206ENST00000443503 PYDC1Q8WXC3 89 aa22.74■■□□□ 1.23
CTDSPL-206ENST00000443503 EXOC2Q96KP1 924 aa22.74■■□□□ 1.23
CTDSPL-206ENST00000443503 PLA2G4CQ9UP65 541 aa22.74■■□□□ 1.23
CTDSPL-206ENST00000443503 SF3B1O75533 1304 aaKnown RBP eCLIP22.73■■□□□ 1.232e-9■■■■■ 197
CTDSPL-206ENST00000443503 RAD51BO15315 384 aa22.73■■□□□ 1.23
CTDSPL-206ENST00000443503 ATP5BP06576 529 aaKnown RBP22.73■■□□□ 1.23
CTDSPL-206ENST00000443503 FKBP1BP68106 108 aa22.73■■□□□ 1.23
CTDSPL-206ENST00000443503 MSLNQ13421 630 aaPredicted RBP22.73■■□□□ 1.23
CTDSPL-206ENST00000443503 EML3Q32P44 896 aa22.73■■□□□ 1.23
CTDSPL-206ENST00000443503 ARMC12Q5T9G4 340 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms