RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 ELAVL3Q14576 367 aaKnown RBP14.08□□□□□ -0.16
LTBR-202ENST00000440421 MANEALQ5VSG8 457 aa14.08□□□□□ -0.16
LTBR-202ENST00000440421 PLEKHA7Q6IQ23 1121 aa14.08□□□□□ -0.16
LTBR-202ENST00000440421 Q6ZVU0 165 aa14.08□□□□□ -0.16
LTBR-202ENST00000440421 TMC6Q7Z403 805 aa14.08□□□□□ -0.16
LTBR-202ENST00000440421 PYROXD2Q8N2H3 581 aa14.08□□□□□ -0.16
LTBR-202ENST00000440421 SH2D3CQ8N5H7 860 aa14.08□□□□□ -0.16
LTBR-202ENST00000440421 DCAF4L2Q8NA75 395 aa14.08□□□□□ -0.16
LTBR-202ENST00000440421 RNF214Q8ND24 703 aa14.08□□□□□ -0.16
LTBR-202ENST00000440421 CEP76Q8TAP6 659 aa14.08□□□□□ -0.16
LTBR-202ENST00000440421 NTAN1Q96AB6 310 aa14.08□□□□□ -0.16
LTBR-202ENST00000440421 ZNF653Q96CK0 615 aa14.08□□□□□ -0.16
LTBR-202ENST00000440421 OMDQ99983 421 aa14.08□□□□□ -0.16
LTBR-202ENST00000440421 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.08□□□□□ -0.16
LTBR-202ENST00000440421 GTPBP2Q9BX10 602 aaKnown RBP14.08□□□□□ -0.16
LTBR-202ENST00000440421 C6orf106Q9H6K1 298 aaPredicted RBP14.08□□□□□ -0.16
LTBR-202ENST00000440421 MYO1AQ9UBC5 1043 aa14.08□□□□□ -0.16
LTBR-202ENST00000440421 CNOT8Q9UFF9 292 aaKnown RBP14.08□□□□□ -0.16
LTBR-202ENST00000440421 DNAI1Q9UI46 699 aa14.08□□□□□ -0.16
LTBR-202ENST00000440421 CAPN11Q9UMQ6 739 aa14.08□□□□□ -0.16
LTBR-202ENST00000440421 SCML1Q9UN30 329 aa14.08□□□□□ -0.16
LTBR-202ENST00000440421 SLC6A14Q9UN76 642 aa14.08□□□□□ -0.16
LTBR-202ENST00000440421 DOCK4Q8N1I0 1966 aa14.08□□□□□ -0.16
LTBR-202ENST00000440421 GON4LQ3T8J9 2241 aa14.07□□□□□ -0.16
LTBR-202ENST00000440421 ILVBLA1L0T0 632 aa14.07□□□□□ -0.16
LTBR-202ENST00000440421 CDX4O14627 284 aaPredicted RBP14.07□□□□□ -0.16
LTBR-202ENST00000440421 RTN2O75298 545 aa14.07□□□□□ -0.16
LTBR-202ENST00000440421 GYPCP04921 128 aa14.07□□□□□ -0.16
LTBR-202ENST00000440421 SERPINF2P08697 491 aa14.07□□□□□ -0.16
LTBR-202ENST00000440421 GZMAP12544 262 aa14.07□□□□□ -0.16
LTBR-202ENST00000440421 SRCP12931 536 aa14.07□□□□□ -0.16
LTBR-202ENST00000440421 GNSP15586 552 aa14.07□□□□□ -0.16
LTBR-202ENST00000440421 RHOQP17081 205 aa14.07□□□□□ -0.16
LTBR-202ENST00000440421 DESP17661 470 aa14.07□□□□□ -0.16
LTBR-202ENST00000440421 PSMA2P25787 234 aa14.07□□□□□ -0.16
LTBR-202ENST00000440421 VASPP50552 380 aaPredicted RBP14.07□□□□□ -0.16
LTBR-202ENST00000440421 ZBED6P86452 979 aa14.07□□□□□ -0.16
LTBR-202ENST00000440421 NRG1Q02297 640 aaPredicted RBP14.07□□□□□ -0.16
LTBR-202ENST00000440421 GNA12Q03113 381 aa14.07□□□□□ -0.16
LTBR-202ENST00000440421 NFKBIBQ15653 356 aa14.07□□□□□ -0.16
LTBR-202ENST00000440421 UAP1L1Q3KQV9 507 aa14.07□□□□□ -0.16
LTBR-202ENST00000440421 POM121L1PQ3SYA9 428 aa14.07□□□□□ -0.16
LTBR-202ENST00000440421 EFHC2Q5JST6 749 aa14.07□□□□□ -0.16
LTBR-202ENST00000440421 HGSNATQ68CP4 663 aa14.07□□□□□ -0.16
LTBR-202ENST00000440421 ZNF783Q6ZMS7 281 aa14.07□□□□□ -0.16
LTBR-202ENST00000440421 USP30Q70CQ3 517 aa14.07□□□□□ -0.16
LTBR-202ENST00000440421 RABEPKQ7Z6M1 372 aa14.07□□□□□ -0.16
LTBR-202ENST00000440421 HDDC3Q8N4P3 179 aa14.07□□□□□ -0.16
LTBR-202ENST00000440421 ZCCHC9Q8N567 271 aaKnown RBP14.07□□□□□ -0.16
LTBR-202ENST00000440421 AADATQ8N5Z0 425 aa14.07□□□□□ -0.16
LTBR-202ENST00000440421 DNASE2BQ8WZ79 361 aa14.07□□□□□ -0.16
LTBR-202ENST00000440421 OR8D1Q8WZ84 308 aa14.07□□□□□ -0.16
LTBR-202ENST00000440421 SYN2Q92777 582 aaPredicted RBP14.07□□□□□ -0.16
LTBR-202ENST00000440421 TBC1D31Q96DN5 1066 aa14.07□□□□□ -0.16
LTBR-202ENST00000440421 NEUROG2Q9H2A3 272 aa14.07□□□□□ -0.16
LTBR-202ENST00000440421 SGK2Q9HBY8 427 aa14.07□□□□□ -0.16
LTBR-202ENST00000440421 CAPN10Q9HC96 672 aa14.07□□□□□ -0.16
LTBR-202ENST00000440421 ATP13A1Q9HD20 1204 aa14.07□□□□□ -0.16
LTBR-202ENST00000440421 TMEM9BQ9NQ34 198 aa14.07□□□□□ -0.16
LTBR-202ENST00000440421 NDFIP2Q9NV92 336 aa14.07□□□□□ -0.16
LTBR-202ENST00000440421 SUSD2Q9UGT4 822 aa14.07□□□□□ -0.16
LTBR-202ENST00000440421 ADAMTS1Q9UHI8 967 aa14.07□□□□□ -0.16
LTBR-202ENST00000440421 EIF2B4Q9UI10 523 aaKnown RBP14.07□□□□□ -0.16
LTBR-202ENST00000440421 FZD10Q9ULW2 581 aa14.07□□□□□ -0.16
LTBR-202ENST00000440421 HS3ST2Q9Y278 367 aa14.07□□□□□ -0.16
LTBR-202ENST00000440421 LUC7L2Q9Y383 392 aaKnown RBP14.07□□□□□ -0.16
LTBR-202ENST00000440421 ADAMTS9Q9P2N4 1935 aa14.07□□□□□ -0.16
LTBR-202ENST00000440421 NUMA1Q14980 2115 aa14.06□□□□□ -0.16
LTBR-202ENST00000440421 MED19A0JLT2 244 aaPredicted RBP14.06□□□□□ -0.16
LTBR-202ENST00000440421 PLK4O00444 970 aa14.06□□□□□ -0.16
LTBR-202ENST00000440421 SMAD6O43541 496 aaKnown RBP14.06□□□□□ -0.16
LTBR-202ENST00000440421 CREB3O43889 395 aa14.06□□□□□ -0.16
LTBR-202ENST00000440421 FSBPO95073 299 aa14.06□□□□□ -0.16
LTBR-202ENST00000440421 ADH1BP00325 375 aa14.06□□□□□ -0.16
LTBR-202ENST00000440421 SERPING1P05155 500 aa14.06□□□□□ -0.16
LTBR-202ENST00000440421 TPM3P06753 285 aa14.06□□□□□ -0.16
LTBR-202ENST00000440421 C5AR1P21730 350 aa14.06□□□□□ -0.16
LTBR-202ENST00000440421 CASP14P31944 242 aa14.06□□□□□ -0.16
LTBR-202ENST00000440421 ACVRL1P37023 503 aa14.06□□□□□ -0.16
LTBR-202ENST00000440421 METAP1P53582 386 aa14.06□□□□□ -0.16
LTBR-202ENST00000440421 ATXN3P54252 364 aaPredicted RBP14.06□□□□□ -0.16
LTBR-202ENST00000440421 SCAPQ12770 1279 aa14.06□□□□□ -0.16
LTBR-202ENST00000440421 SFSWAPQ12872 951 aaKnown RBP14.06□□□□□ -0.16
LTBR-202ENST00000440421 DSG4Q86SJ6 1040 aa14.06□□□□□ -0.16
LTBR-202ENST00000440421 NLRP14Q86W24 1093 aa14.06□□□□□ -0.16
LTBR-202ENST00000440421 OR2I1PQ8NGU4 316 aa14.06□□□□□ -0.16
LTBR-202ENST00000440421 BIRC7Q96CA5 298 aa14.06□□□□□ -0.16
LTBR-202ENST00000440421 IQCDQ96DY2 449 aa14.06□□□□□ -0.16
LTBR-202ENST00000440421 TRIM7Q9C029 511 aa14.06□□□□□ -0.16
LTBR-202ENST00000440421 PCED1AQ9H1Q7 454 aa14.06□□□□□ -0.16
LTBR-202ENST00000440421 TNKS2Q9H2K2 1166 aa14.06□□□□□ -0.16
LTBR-202ENST00000440421 TMEM248Q9NWD8 314 aa14.06□□□□□ -0.16
LTBR-202ENST00000440421 GPATCH2LQ9NWQ4 482 aa14.06□□□□□ -0.16
LTBR-202ENST00000440421 NEU3Q9UQ49 428 aa14.06□□□□□ -0.16
LTBR-202ENST00000440421 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.06□□□□□ -0.16
LTBR-202ENST00000440421 ACTL7AQ9Y615 435 aa14.06□□□□□ -0.16
LTBR-202ENST00000440421 BZW2Q9Y6E2 419 aaKnown RBP14.06□□□□□ -0.16
LTBR-202ENST00000440421 A0A1B0GTW7 788 aa14.05□□□□□ -0.16
LTBR-202ENST00000440421 TMEM191CA6NGB0 347 aa14.05□□□□□ -0.16
LTBR-202ENST00000440421 TM4SF5O14894 197 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms