RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 CTBP1Q13363 440 aa13.82□□□□□ -0.2
HERPUD1-204ENST00000439977 SV2CQ496J9 727 aa13.82□□□□□ -0.2
HERPUD1-204ENST00000439977 STXBP5Q5T5C0 1151 aa13.82□□□□□ -0.2
HERPUD1-204ENST00000439977 NXNQ6DKJ4 435 aa13.82□□□□□ -0.2
HERPUD1-204ENST00000439977 DHDDSQ86SQ9 333 aa13.82□□□□□ -0.2
HERPUD1-204ENST00000439977 TMEM135Q86UB9 458 aa13.82□□□□□ -0.2
HERPUD1-204ENST00000439977 SMG8Q8ND04 991 aaKnown RBP13.82□□□□□ -0.2
HERPUD1-204ENST00000439977 NT5C3BQ969T7 300 aa13.82□□□□□ -0.2
HERPUD1-204ENST00000439977 EMID1Q96A84 441 aaPredicted RBP13.82□□□□□ -0.2
HERPUD1-204ENST00000439977 TINF2Q9BSI4 451 aa13.82□□□□□ -0.2
HERPUD1-204ENST00000439977 TKTL2Q9H0I9 626 aa13.82□□□□□ -0.2
HERPUD1-204ENST00000439977 CDH19Q9H159 772 aa13.82□□□□□ -0.2
HERPUD1-204ENST00000439977 DNAJC28Q9NX36 388 aa13.82□□□□□ -0.2
HERPUD1-204ENST00000439977 SSX2IPQ9Y2D8 614 aa13.82□□□□□ -0.2
HERPUD1-204ENST00000439977 FIS1Q9Y3D6 152 aa13.82□□□□□ -0.2
HERPUD1-204ENST00000439977 PTGESO14684 152 aa13.81□□□□□ -0.2
HERPUD1-204ENST00000439977 YBX3P16989 372 aaKnown RBP eCLIP13.81□□□□□ -0.2
HERPUD1-204ENST00000439977 NUDT2P50583 147 aa13.81□□□□□ -0.2
HERPUD1-204ENST00000439977 KLF10Q13118 480 aa13.81□□□□□ -0.2
HERPUD1-204ENST00000439977 POU6F1Q14863 301 aa13.81□□□□□ -0.2
HERPUD1-204ENST00000439977 DENND6AQ8IWF6 608 aa13.81□□□□□ -0.2
HERPUD1-204ENST00000439977 SHCBP1Q8NEM2 672 aa13.81□□□□□ -0.2
HERPUD1-204ENST00000439977 LPPQ93052 612 aa13.81□□□□□ -0.2
HERPUD1-204ENST00000439977 PCED1BQ96HM7 432 aa13.81□□□□□ -0.2
HERPUD1-204ENST00000439977 SMOQ99835 787 aa13.81□□□□□ -0.2
HERPUD1-204ENST00000439977 PAAF1Q9BRP4 392 aa13.81□□□□□ -0.2
HERPUD1-204ENST00000439977 RCOR3Q9P2K3 495 aaPredicted RBP13.81□□□□□ -0.2
HERPUD1-204ENST00000439977 OR12D3Q9UGF7 316 aa13.81□□□□□ -0.2
HERPUD1-204ENST00000439977 PCDHB12Q9Y5F1 795 aa13.81□□□□□ -0.2
HERPUD1-204ENST00000439977 NUP205Q92621 2012 aa13.81□□□□□ -0.2
HERPUD1-204ENST00000439977 BRCA1P38398 1863 aaKnown RBP13.81□□□□□ -0.2
HERPUD1-204ENST00000439977 TRIM13O60858 407 aa13.81□□□□□ -0.2
HERPUD1-204ENST00000439977 CDK18Q07002 472 aa13.81□□□□□ -0.2
HERPUD1-204ENST00000439977 TMCO4Q5TGY1 634 aa13.81□□□□□ -0.2
HERPUD1-204ENST00000439977 GDPD5Q8WTR4 605 aa13.81□□□□□ -0.2
HERPUD1-204ENST00000439977 KCTD4Q8WVF5 259 aa13.81□□□□□ -0.2
HERPUD1-204ENST00000439977 USP13Q92995 863 aaPredicted RBP13.81□□□□□ -0.2
HERPUD1-204ENST00000439977 FTHL17Q9BXU8 183 aa13.81□□□□□ -0.2
HERPUD1-204ENST00000439977 TCF7L2Q9NQB0 619 aa13.81□□□□□ -0.2
HERPUD1-204ENST00000439977 PAPOLBQ9NRJ5 636 aaKnown RBP13.81□□□□□ -0.2
HERPUD1-204ENST00000439977 SORCS3Q9UPU3 1222 aa13.81□□□□□ -0.2
HERPUD1-204ENST00000439977 NRCAMQ92823 1304 aa13.81□□□□□ -0.2
HERPUD1-204ENST00000439977 OTOFQ9HC10 1997 aa13.81□□□□□ -0.2
HERPUD1-204ENST00000439977 RBM47A0AV96 593 aaKnown RBP13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 TMEM233B4DJY2 109 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 DFFAO00273 331 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 ARSAP15289 507 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 SCNN1AP37088 669 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 PKNOX1P55347 436 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 DLG1Q12959 904 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 USP10Q14694 798 aaKnown RBP13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 INSCQ1MX18 579 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 GRAMD1BQ3KR37 738 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 CCDC153Q494R4 210 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 ARL13AQ5H913 290 aaPredicted RBP13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 ZNF280DQ6N043 979 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 EPGNQ6UW88 154 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 SNX32Q86XE0 403 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 ZMIZ2Q8NF64 920 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 OR6Y1Q8NGX8 325 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 SENP8Q96LD8 212 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 COLEC11Q9BWP8 271 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 WDCPQ9H6R7 721 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 SPATS2LQ9NUQ6 558 aaKnown RBP13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 NUDT5Q9UKK9 219 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 ASB3Q9Y575 518 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 CDY2AQ9Y6F7 541 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 CDY1Q9Y6F8 540 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 CCL15-CCL14A0A0B4J2E2 113 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 STX16-NPEPL1H3BU86 382 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 LRIG2O94898 1065 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 TCN1P20061 433 aaPredicted RBP13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 CYP2B6P20813 491 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 CRABP2P29373 138 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 GRIA4P48058 902 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 PDCD2Q16342 344 aaPredicted RBP13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 CCL15Q16663 113 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 SMYD5Q6GMV2 418 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 PGM2L1Q6PCE3 622 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 SLC41A1Q8IVJ1 513 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 CCNYL1Q8N7R7 359 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 ACTRT2Q8TDY3 377 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 HASPINQ8TF76 798 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 CATSPER2Q96P56 530 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 GBP5Q96PP8 586 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 ACE2Q9BYF1 805 aaPredicted RBP13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 ABHD16BQ9H3Z7 469 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 TLK1Q9UKI8 766 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 RUVBL2Q9Y230 463 aaKnown RBP13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 ZNF638Q14966 1978 aaKnown RBP13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 CASTOR2A6NHX0 329 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 RRN3P2A6NIE6 340 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 FKBP6O75344 327 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 PIGNO95427 931 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 PNPLA4P41247 253 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 CLCNKBP51801 687 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 DAOAP59103 153 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 MPP1Q00013 466 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 SLC30A9Q6PML9 568 aa13.8□□□□□ -0.2
HERPUD1-204ENST00000439977 RPS27LQ71UM5 84 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms