RNA–Protein interactions for RNA: ENST00000438317.5

ERGIC3-207, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-207ENST00000438317 PABPC5Q96DU9 382 aaKnown RBP11.28□□□□□ -0.6
ERGIC3-207ENST00000438317 MRPL38Q96DV4 380 aaKnown RBP11.28□□□□□ -0.6
ERGIC3-207ENST00000438317 RMDN2Q96LZ7 410 aa11.28□□□□□ -0.6
ERGIC3-207ENST00000438317 FAM111AQ96PZ2 611 aa11.28□□□□□ -0.6
ERGIC3-207ENST00000438317 TMEM237Q96Q45 408 aa11.28□□□□□ -0.6
ERGIC3-207ENST00000438317 KLF6Q99612 283 aaPredicted RBP11.28□□□□□ -0.6
ERGIC3-207ENST00000438317 TKTL2Q9H0I9 626 aa11.28□□□□□ -0.6
ERGIC3-207ENST00000438317 CATSPERBQ9H7T0 1116 aa11.28□□□□□ -0.6
ERGIC3-207ENST00000438317 SMYD2Q9NRG4 433 aa11.28□□□□□ -0.6
ERGIC3-207ENST00000438317 ARHGEF38Q9NXL2 777 aa11.28□□□□□ -0.6
ERGIC3-207ENST00000438317 DONSONQ9NYP3 566 aa11.28□□□□□ -0.6
ERGIC3-207ENST00000438317 TXNDC16Q9P2K2 825 aa11.28□□□□□ -0.6
ERGIC3-207ENST00000438317 ADAM28Q9UKQ2 775 aa11.28□□□□□ -0.6
ERGIC3-207ENST00000438317 MFHAS1Q9Y4C4 1052 aa11.28□□□□□ -0.6
ERGIC3-207ENST00000438317 TECTAO75443 2155 aa11.28□□□□□ -0.6
ERGIC3-207ENST00000438317 C5orf42Q9H799 3197 aa11.27□□□□□ -0.6
ERGIC3-207ENST00000438317 WDR91A4D1P6 747 aa11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 FAM72CH0Y354 149 aa11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 UNC5CO95185 931 aa11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 OAZ2O95190 189 aa11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 PARNO95453 639 aaKnown RBP11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 IGLV3-25P01717 112 aa11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 SRGAP2BP0DMP2 458 aa11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 SLC2A3P11169 496 aa11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 CKBP12277 381 aa11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 MGAT1P26572 445 aa11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 EPHB2P29323 1055 aa11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 LTBRP36941 435 aa11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 HADHAP40939 763 aa11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 GRIA1P42261 906 aa11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 ARFIP2P53365 341 aa11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 CACNA2D1P54289 1103 aa11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 SESN2P58004 480 aaPredicted RBP11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 HTRA4P83105 476 aaPredicted RBP11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 NRG1Q02297 640 aaPredicted RBP11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 NIPAL4Q0D2K0 466 aa11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 EIF4EBP2Q13542 120 aaPredicted RBP11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 MBTPS1Q14703 1052 aa11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 PPP2R5DQ14738 602 aa11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 NFE2Q16621 373 aaPredicted RBP11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 ACBD5Q5T8D3 534 aaPredicted RBP11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 FAM72AQ5TYM5 149 aa11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 FAM72DQ6L9T8 149 aa11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.27□□□□□ -0.617e-11■□□□□ 11.1
ERGIC3-207ENST00000438317 SLC24A5Q71RS6 500 aa11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 ASRGL1Q7L266 308 aa11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 NLRP9Q7RTR0 991 aa11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 TBC1D1Q86TI0 1168 aaPredicted RBP11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 FAM72BQ86X60 149 aa11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 NUDCD3Q8IVD9 361 aa11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 ADHFE1Q8IWW8 467 aa11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 NDUFAF2Q8N183 169 aa11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 ADAM32Q8TC27 787 aa11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 LRRN4Q8WUT4 740 aa11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 E2F7Q96AV8 911 aa11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 TEKT5Q96M29 485 aa11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 C7orf26Q96N11 449 aa11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 CPNE1Q99829 537 aa11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 PAAF1Q9BRP4 392 aa11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 FTHL17Q9BXU8 183 aa11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 CASS4Q9NQ75 786 aa11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 TMPRSS4Q9NRS4 437 aa11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 NSMCE4AQ9NXX6 385 aa11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 CACNG4Q9UBN1 327 aa11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 CHKBQ9Y259 395 aa11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 AAR2Q9Y312 384 aaKnown RBP11.27□□□□□ -0.61
ERGIC3-207ENST00000438317 MYO7AQ13402 2215 aa11.26□□□□□ -0.61
ERGIC3-207ENST00000438317 FAM237BA0A1B0GVD1 139 aa11.26□□□□□ -0.61
ERGIC3-207ENST00000438317 TRAFD1O14545 582 aaPredicted RBP11.26□□□□□ -0.61
ERGIC3-207ENST00000438317 DNAJC6O75061 913 aa11.26□□□□□ -0.61
ERGIC3-207ENST00000438317 GLRA3O75311 464 aa11.26□□□□□ -0.61
ERGIC3-207ENST00000438317 PIAS1O75925 651 aa11.26□□□□□ -0.61
ERGIC3-207ENST00000438317 ANXA9O76027 345 aa11.26□□□□□ -0.61
ERGIC3-207ENST00000438317 USP1O94782 785 aa11.26□□□□□ -0.61
ERGIC3-207ENST00000438317 LRIG2O94898 1065 aa11.26□□□□□ -0.61
ERGIC3-207ENST00000438317 CSH1P0DML2 217 aa11.26□□□□□ -0.61
ERGIC3-207ENST00000438317 CSH2P0DML3 217 aa11.26□□□□□ -0.61
ERGIC3-207ENST00000438317 CCR1P32246 355 aa11.26□□□□□ -0.61
ERGIC3-207ENST00000438317 SPRP35270 261 aaPredicted RBP11.26□□□□□ -0.61
ERGIC3-207ENST00000438317 GRIK1P39086 918 aa11.26□□□□□ -0.61
ERGIC3-207ENST00000438317 GP5P40197 560 aa11.26□□□□□ -0.61
ERGIC3-207ENST00000438317 MNAT1P51948 309 aa11.26□□□□□ -0.61
ERGIC3-207ENST00000438317 YWHAHQ04917 246 aaPredicted RBP11.26□□□□□ -0.61
ERGIC3-207ENST00000438317 IKBKEQ14164 716 aa11.26□□□□□ -0.61
ERGIC3-207ENST00000438317 CRYMQ14894 314 aa11.26□□□□□ -0.61
ERGIC3-207ENST00000438317 TCEAL5Q5H9L2 206 aa11.26□□□□□ -0.61
ERGIC3-207ENST00000438317 IER5LQ5T953 404 aa11.26□□□□□ -0.61
ERGIC3-207ENST00000438317 MROH9Q5TGP6 573 aa11.26□□□□□ -0.61
ERGIC3-207ENST00000438317 KCTD11Q693B1 232 aa11.26□□□□□ -0.61
ERGIC3-207ENST00000438317 NAPEPLDQ6IQ20 393 aa11.26□□□□□ -0.61
ERGIC3-207ENST00000438317 TRMT10BQ6PF06 316 aaKnown RBP11.26□□□□□ -0.61
ERGIC3-207ENST00000438317 PACS1Q6VY07 963 aa11.26□□□□□ -0.61
ERGIC3-207ENST00000438317 TMEM135Q86UB9 458 aa11.26□□□□□ -0.61
ERGIC3-207ENST00000438317 LRRTM3Q86VH5 581 aa11.26□□□□□ -0.61
ERGIC3-207ENST00000438317 KLHDC8BQ8IXV7 354 aa11.26□□□□□ -0.61
ERGIC3-207ENST00000438317 CCDC33Q8N5R6 958 aa11.26□□□□□ -0.61
ERGIC3-207ENST00000438317 STKLD1Q8NE28 680 aa11.26□□□□□ -0.61
ERGIC3-207ENST00000438317 DQX1Q8TE96 717 aaKnown RBP11.26□□□□□ -0.61
ERGIC3-207ENST00000438317 SPOCK2Q92563 424 aa11.26□□□□□ -0.61
ERGIC3-207ENST00000438317 EDEM1Q92611 657 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms