RNA–Protein interactions for RNA: ENST00000437196.1

EXT1-203, Transcript of exostosin glycosyltransferase 1, humanhuman

TSL 5

Gene EXT1, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-203ENST00000437196 DTLQ9NZJ0 730 aa13.79□□□□□ -0.2
EXT1-203ENST00000437196 OR51B4Q9Y5P0 310 aa13.79□□□□□ -0.2
EXT1-203ENST00000437196 MYO18AQ92614 2054 aaKnown RBP13.78□□□□□ -0.2
EXT1-203ENST00000437196 TRIOO75962 3097 aa13.78□□□□□ -0.2
EXT1-203ENST00000437196 A0A0D9SEW6 157 aa13.78□□□□□ -0.2
EXT1-203ENST00000437196 KRBA1A5PL33 1030 aa13.78□□□□□ -0.2
EXT1-203ENST00000437196 HACD1B0YJ81 288 aa13.78□□□□□ -0.2
EXT1-203ENST00000437196 CBX4O00257 560 aa13.78□□□□□ -0.2
EXT1-203ENST00000437196 PGRMC1O00264 195 aaKnown RBP13.78□□□□□ -0.2
EXT1-203ENST00000437196 STK25O00506 426 aa13.78□□□□□ -0.2
EXT1-203ENST00000437196 MFSD11O43934 449 aa13.78□□□□□ -0.2
EXT1-203ENST00000437196 FGGP02679 453 aa13.78□□□□□ -0.2
EXT1-203ENST00000437196 DLDP09622 509 aaKnown RBP13.78□□□□□ -0.2
EXT1-203ENST00000437196 GARSP41250 739 aaKnown RBP13.78□□□□□ -0.2
EXT1-203ENST00000437196 PAFAH1B1P43034 410 aa13.78□□□□□ -0.2
EXT1-203ENST00000437196 VASPP50552 380 aaPredicted RBP13.78□□□□□ -0.2
EXT1-203ENST00000437196 PAPOLAP51003 745 aaKnown RBP13.78□□□□□ -0.2
EXT1-203ENST00000437196 KLF1Q13351 362 aaPredicted RBP13.78□□□□□ -0.2
EXT1-203ENST00000437196 XRCC4Q13426 336 aa13.78□□□□□ -0.2
EXT1-203ENST00000437196 TUBB2AQ13885 445 aa13.78□□□□□ -0.2
EXT1-203ENST00000437196 LONRF2Q1L5Z9 754 aa13.78□□□□□ -0.2
EXT1-203ENST00000437196 FUT11Q495W5 492 aa13.78□□□□□ -0.2
EXT1-203ENST00000437196 HSF5Q4G112 596 aaPredicted RBP13.78□□□□□ -0.2
EXT1-203ENST00000437196 SDE2Q6IQ49 451 aa13.78□□□□□ -0.2
EXT1-203ENST00000437196 ARHGAP12Q8IWW6 846 aa13.78□□□□□ -0.2
EXT1-203ENST00000437196 APCDD1Q8J025 514 aa13.78□□□□□ -0.2
EXT1-203ENST00000437196 BBS5Q8N3I7 341 aa13.78□□□□□ -0.2
EXT1-203ENST00000437196 RASGEF1CQ8N431 466 aa13.78□□□□□ -0.2
EXT1-203ENST00000437196 OR7D4Q8NG98 312 aa13.78□□□□□ -0.2
EXT1-203ENST00000437196 ACTRT1Q8TDG2 376 aa13.78□□□□□ -0.2
EXT1-203ENST00000437196 HDAC11Q96DB2 347 aa13.78□□□□□ -0.2
EXT1-203ENST00000437196 ALG14Q96F25 216 aa13.78□□□□□ -0.2
EXT1-203ENST00000437196 HMCESQ96FZ2 354 aa13.78□□□□□ -0.2
EXT1-203ENST00000437196 TUBB2BQ9BVA1 445 aa13.78□□□□□ -0.2
EXT1-203ENST00000437196 NOL6Q9H6R4 1146 aaKnown RBP13.78□□□□□ -0.2
EXT1-203ENST00000437196 GOLGA6L10A0A0M3HER8 536 aa13.77□□□□□ -0.21
EXT1-203ENST00000437196 ESPNB1AK53 854 aa13.77□□□□□ -0.21
EXT1-203ENST00000437196 MCF2LO15068 1137 aa13.77□□□□□ -0.21
EXT1-203ENST00000437196 TRIM24O15164 1050 aa13.77□□□□□ -0.21
EXT1-203ENST00000437196 MTSS1O43312 755 aa13.77□□□□□ -0.21
EXT1-203ENST00000437196 CCNCP24863 283 aa13.77□□□□□ -0.21
EXT1-203ENST00000437196 ACVRL1P37023 503 aa13.77□□□□□ -0.21
EXT1-203ENST00000437196 CLCN6P51797 869 aa13.77□□□□□ -0.21
EXT1-203ENST00000437196 MRPS21P82921 87 aaKnown RBP13.77□□□□□ -0.21
EXT1-203ENST00000437196 GBE1Q04446 702 aa13.77□□□□□ -0.21
EXT1-203ENST00000437196 IL10RBQ08334 325 aa13.77□□□□□ -0.21
EXT1-203ENST00000437196 RFTN1Q14699 578 aaPredicted RBP13.77□□□□□ -0.21
EXT1-203ENST00000437196 LLGL1Q15334 1064 aa13.77□□□□□ -0.21
EXT1-203ENST00000437196 INO80DQ53TQ3 878 aaPredicted RBP13.77□□□□□ -0.21
EXT1-203ENST00000437196 FSTL4Q6MZW2 842 aa13.77□□□□□ -0.21
EXT1-203ENST00000437196 AADACL2Q6P093 401 aa13.77□□□□□ -0.21
EXT1-203ENST00000437196 TRIM67Q6ZTA4 783 aa13.77□□□□□ -0.21
EXT1-203ENST00000437196 CCNYQ8ND76 341 aa13.77□□□□□ -0.21
EXT1-203ENST00000437196 OR52K2Q8NGK3 314 aa13.77□□□□□ -0.21
EXT1-203ENST00000437196 FATE1Q969F0 183 aa13.77□□□□□ -0.21
EXT1-203ENST00000437196 ZNF599Q96NL3 588 aa13.77□□□□□ -0.21
EXT1-203ENST00000437196 TSGA13Q96PP4 275 aa13.77□□□□□ -0.21
EXT1-203ENST00000437196 LTB4R2Q9NPC1 389 aa13.77□□□□□ -0.21
EXT1-203ENST00000437196 IPO11Q9UI26 975 aaKnown RBP13.77□□□□□ -0.21
EXT1-203ENST00000437196 VPS51Q9UID3 782 aa13.77□□□□□ -0.21
EXT1-203ENST00000437196 INTS6Q9UL03 887 aaKnown RBP13.77□□□□□ -0.21
EXT1-203ENST00000437196 NDRG2Q9UN36 371 aaKnown RBP13.77□□□□□ -0.21
EXT1-203ENST00000437196 FAM170BA6NMN3 283 aa13.76□□□□□ -0.21
EXT1-203ENST00000437196 PRRT4C9JH25 899 aa13.76□□□□□ -0.21
EXT1-203ENST00000437196 ZNF500O60304 480 aaPredicted RBP13.76□□□□□ -0.21
EXT1-203ENST00000437196 PRAMEF11O60813 436 aa13.76□□□□□ -0.21
EXT1-203ENST00000437196 ATG13O75143 517 aa13.76□□□□□ -0.21
EXT1-203ENST00000437196 HNRNPLP14866 589 aaKnown RBP eCLIP13.76□□□□□ -0.211e-7■■□□□ 12.6
EXT1-203ENST00000437196 MAGEA9P43362 315 aa13.76□□□□□ -0.21
EXT1-203ENST00000437196 CCINQ13939 588 aa13.76□□□□□ -0.21
EXT1-203ENST00000437196 UBXN2BQ14CS0 331 aa13.76□□□□□ -0.21
EXT1-203ENST00000437196 NOMO1Q15155 1222 aa13.76□□□□□ -0.21
EXT1-203ENST00000437196 IER5LQ5T953 404 aa13.76□□□□□ -0.21
EXT1-203ENST00000437196 NAIF1Q69YI7 327 aaPredicted RBP13.76□□□□□ -0.21
EXT1-203ENST00000437196 ZNF513Q8N8E2 541 aaPredicted RBP13.76□□□□□ -0.21
EXT1-203ENST00000437196 TFB1MQ8WVM0 346 aaKnown RBP13.76□□□□□ -0.21
EXT1-203ENST00000437196 ZNF592Q92610 1267 aa13.76□□□□□ -0.21
EXT1-203ENST00000437196 OLFM3Q96PB7 478 aa13.76□□□□□ -0.21
EXT1-203ENST00000437196 IER2Q9BTL4 223 aa13.76□□□□□ -0.21
EXT1-203ENST00000437196 TBC1D17Q9HA65 648 aa13.76□□□□□ -0.21
EXT1-203ENST00000437196 FBRSL1Q9HCM7 1045 aaKnown RBP13.76□□□□□ -0.21
EXT1-203ENST00000437196 UBA2Q9UBT2 640 aaPredicted RBP13.76□□□□□ -0.21
EXT1-203ENST00000437196 ERVW-1Q9UQF0 538 aa13.76□□□□□ -0.21
EXT1-203ENST00000437196 HS3ST2Q9Y278 367 aa13.76□□□□□ -0.21
EXT1-203ENST00000437196 MFHAS1Q9Y4C4 1052 aa13.76□□□□□ -0.21
EXT1-203ENST00000437196 SHROOM3Q8TF72 1996 aa13.75□□□□□ -0.21
EXT1-203ENST00000437196 K7EQS6 105 aa13.75□□□□□ -0.21
EXT1-203ENST00000437196 MAFKO60675 156 aa13.75□□□□□ -0.21
EXT1-203ENST00000437196 NEBLO76041 1014 aa13.75□□□□□ -0.21
EXT1-203ENST00000437196 EGFP01133 1207 aa13.75□□□□□ -0.21
EXT1-203ENST00000437196 CD72P21854 359 aa13.75□□□□□ -0.21
EXT1-203ENST00000437196 RENBPP51606 427 aa13.75□□□□□ -0.21
EXT1-203ENST00000437196 OTUD4Q01804 1114 aaKnown RBP13.75□□□□□ -0.21
EXT1-203ENST00000437196 ADCY2Q08462 1091 aa13.75□□□□□ -0.21
EXT1-203ENST00000437196 PPIDQ08752 370 aaKnown RBP13.75□□□□□ -0.21
EXT1-203ENST00000437196 SLC10A2Q12908 348 aaPredicted RBP13.75□□□□□ -0.21
EXT1-203ENST00000437196 FNDC3BQ53EP0 1204 aaKnown RBP13.75□□□□□ -0.21
EXT1-203ENST00000437196 TMEM215Q68D42 235 aa13.75□□□□□ -0.21
EXT1-203ENST00000437196 CDKL3Q8IVW4 592 aaPredicted RBP13.75□□□□□ -0.21
EXT1-203ENST00000437196 CCDC13Q8IYE1 715 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms