RNA–Protein interactions for RNA: ENST00000434728.1

CDC42EP1-204, Transcript of CDC42 effector protein 1, humanhuman

TSL 4

Gene CDC42EP1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-204ENST00000434728 UBE2TQ9NPD8 197 aaPredicted RBP13.78□□□□□ -0.2
CDC42EP1-204ENST00000434728 CTNND2Q9UQB3 1225 aa13.78□□□□□ -0.2
CDC42EP1-204ENST00000434728 FLNBO75369 2602 aaKnown RBP13.78□□□□□ -0.2
CDC42EP1-204ENST00000434728 TDRD6O60522 2096 aaKnown RBP13.78□□□□□ -0.2
CDC42EP1-204ENST00000434728 DOCK9Q9BZ29 2069 aa13.78□□□□□ -0.2
CDC42EP1-204ENST00000434728 ALOX15BO15296 676 aa13.77□□□□□ -0.21
CDC42EP1-204ENST00000434728 SLC31A1O15431 190 aa13.77□□□□□ -0.21
CDC42EP1-204ENST00000434728 FFAR2O15552 330 aa13.77□□□□□ -0.21
CDC42EP1-204ENST00000434728 TLX3O43711 291 aaPredicted RBP13.77□□□□□ -0.21
CDC42EP1-204ENST00000434728 BRINP1O60477 761 aa13.77□□□□□ -0.21
CDC42EP1-204ENST00000434728 GNA14O95837 355 aa13.77□□□□□ -0.21
CDC42EP1-204ENST00000434728 AFPP02771 609 aaKnown RBP13.77□□□□□ -0.21
CDC42EP1-204ENST00000434728 ALPPL2P10696 532 aa13.77□□□□□ -0.21
CDC42EP1-204ENST00000434728 E2F1Q01094 437 aa13.77□□□□□ -0.21
CDC42EP1-204ENST00000434728 CENPCQ03188 943 aa13.77□□□□□ -0.21
CDC42EP1-204ENST00000434728 NME3Q13232 169 aa13.77□□□□□ -0.21
CDC42EP1-204ENST00000434728 MTA1Q13330 715 aa13.77□□□□□ -0.21
CDC42EP1-204ENST00000434728 PDCLQ13371 301 aa13.77□□□□□ -0.21
CDC42EP1-204ENST00000434728 RTP5Q14D33 572 aa13.77□□□□□ -0.21
CDC42EP1-204ENST00000434728 DLG2Q15700 870 aa13.77□□□□□ -0.21
CDC42EP1-204ENST00000434728 SFMBT2Q5VUG0 894 aa13.77□□□□□ -0.21
CDC42EP1-204ENST00000434728 RBM43Q6ZSC3 357 aaKnown RBP13.77□□□□□ -0.21
CDC42EP1-204ENST00000434728 SPATS2Q86XZ4 545 aaKnown RBP13.77□□□□□ -0.21
CDC42EP1-204ENST00000434728 CREBRFQ8IUR6 639 aa13.77□□□□□ -0.21
CDC42EP1-204ENST00000434728 NOX5Q96PH1 765 aa13.77□□□□□ -0.21
CDC42EP1-204ENST00000434728 LGMNQ99538 433 aa13.77□□□□□ -0.21
CDC42EP1-204ENST00000434728 CALN1Q9BXU9 219 aa13.77□□□□□ -0.21
CDC42EP1-204ENST00000434728 SLC4A5Q9BY07 1137 aa13.77□□□□□ -0.21
CDC42EP1-204ENST00000434728 SYNCQ9H7C4 482 aa13.77□□□□□ -0.21
CDC42EP1-204ENST00000434728 PREBQ9HCU5 417 aa13.77□□□□□ -0.21
CDC42EP1-204ENST00000434728 EVA1BQ9NVM1 165 aa13.77□□□□□ -0.21
CDC42EP1-204ENST00000434728 VANGL2Q9ULK5 521 aa13.77□□□□□ -0.21
CDC42EP1-204ENST00000434728 TK2O00142 265 aa13.76□□□□□ -0.21
CDC42EP1-204ENST00000434728 KPNA3O00505 521 aaPredicted RBP13.76□□□□□ -0.21
CDC42EP1-204ENST00000434728 ATXN7O15265 892 aaPredicted RBP13.76□□□□□ -0.21
CDC42EP1-204ENST00000434728 SIGLEC6O43699 453 aa13.76□□□□□ -0.21
CDC42EP1-204ENST00000434728 RNGTTO60942 597 aaKnown RBP13.76□□□□□ -0.21
CDC42EP1-204ENST00000434728 GRAP2O75791 330 aa13.76□□□□□ -0.21
CDC42EP1-204ENST00000434728 THEGLP0DJG4 465 aa13.76□□□□□ -0.21
CDC42EP1-204ENST00000434728 PRLRP16471 622 aa13.76□□□□□ -0.21
CDC42EP1-204ENST00000434728 AKT2P31751 481 aa13.76□□□□□ -0.21
CDC42EP1-204ENST00000434728 RPL34P49207 117 aaKnown RBP13.76□□□□□ -0.21
CDC42EP1-204ENST00000434728 PLK1P53350 603 aa13.76□□□□□ -0.21
CDC42EP1-204ENST00000434728 SNX16P57768 344 aa13.76□□□□□ -0.21
CDC42EP1-204ENST00000434728 PITX1P78337 314 aaPredicted RBP13.76□□□□□ -0.21
CDC42EP1-204ENST00000434728 KRT83P78385 493 aa13.76□□□□□ -0.21
CDC42EP1-204ENST00000434728 MEA1Q16626 185 aa13.76□□□□□ -0.21
CDC42EP1-204ENST00000434728 EFHC1Q5JVL4 640 aa13.76□□□□□ -0.21
CDC42EP1-204ENST00000434728 AGBL4Q5VU57 503 aa13.76□□□□□ -0.21
CDC42EP1-204ENST00000434728 BROXQ5VW32 411 aa13.76□□□□□ -0.21
CDC42EP1-204ENST00000434728 FBXL22Q6P050 247 aa13.76□□□□□ -0.21
CDC42EP1-204ENST00000434728 ENOSF1Q7L5Y1 443 aa13.76□□□□□ -0.21
CDC42EP1-204ENST00000434728 GPR155Q7Z3F1 870 aa13.76□□□□□ -0.21
CDC42EP1-204ENST00000434728 TMC6Q7Z403 805 aa13.76□□□□□ -0.21
CDC42EP1-204ENST00000434728 ATP11CQ8NB49 1132 aa13.76□□□□□ -0.21
CDC42EP1-204ENST00000434728 SNIP1Q8TAD8 396 aaKnown RBP13.76□□□□□ -0.21
CDC42EP1-204ENST00000434728 LMO3Q8TAP4 145 aa13.76□□□□□ -0.21
CDC42EP1-204ENST00000434728 FRS2Q8WU20 508 aa13.76□□□□□ -0.21
CDC42EP1-204ENST00000434728 ZNF606Q8WXB4 792 aa13.76□□□□□ -0.21
CDC42EP1-204ENST00000434728 KLK6Q92876 244 aa13.76□□□□□ -0.21
CDC42EP1-204ENST00000434728 KREMEN1Q96MU8 473 aa13.76□□□□□ -0.21
CDC42EP1-204ENST00000434728 FEM1AQ9BSK4 669 aa13.76□□□□□ -0.21
CDC42EP1-204ENST00000434728 SIK2Q9H0K1 926 aa13.76□□□□□ -0.21
CDC42EP1-204ENST00000434728 NUP62CLQ9H1M0 184 aa13.76□□□□□ -0.21
CDC42EP1-204ENST00000434728 ARHGAP20Q9P2F6 1191 aa13.76□□□□□ -0.21
CDC42EP1-204ENST00000434728 SARDHQ9UL12 918 aa13.76□□□□□ -0.21
CDC42EP1-204ENST00000434728 CA5BQ9Y2D0 317 aa13.76□□□□□ -0.21
CDC42EP1-204ENST00000434728 MCF2LO15068 1137 aa13.75□□□□□ -0.21
CDC42EP1-204ENST00000434728 ATP9BO43861 1147 aa13.75□□□□□ -0.21
CDC42EP1-204ENST00000434728 HSF2BPO75031 334 aa13.75□□□□□ -0.21
CDC42EP1-204ENST00000434728 CLDN11O75508 207 aa13.75□□□□□ -0.21
CDC42EP1-204ENST00000434728 PCDH8O95206 1070 aa13.75□□□□□ -0.21
CDC42EP1-204ENST00000434728 FGFR1OPO95684 399 aaKnown RBP13.75□□□□□ -0.21
CDC42EP1-204ENST00000434728 IGLV3-25P01717 112 aa13.75□□□□□ -0.21
CDC42EP1-204ENST00000434728 ACP1P24666 158 aa13.75□□□□□ -0.21
CDC42EP1-204ENST00000434728 RECQLP46063 649 aaPredicted RBP13.75□□□□□ -0.21
CDC42EP1-204ENST00000434728 STX17P56962 302 aa13.75□□□□□ -0.21
CDC42EP1-204ENST00000434728 CXADRP78310 365 aa13.75□□□□□ -0.21
CDC42EP1-204ENST00000434728 INSM1Q01101 510 aaPredicted RBP13.75□□□□□ -0.21
CDC42EP1-204ENST00000434728 ZNF211Q13398 564 aaPredicted RBP13.75□□□□□ -0.21
CDC42EP1-204ENST00000434728 TAF5Q15542 800 aa13.75□□□□□ -0.21
CDC42EP1-204ENST00000434728 OR6B2Q6IFH4 312 aa13.75□□□□□ -0.21
CDC42EP1-204ENST00000434728 CXorf57Q6NSI4 855 aaKnown RBP13.75□□□□□ -0.21
CDC42EP1-204ENST00000434728 TTI2Q6NXR4 508 aa13.75□□□□□ -0.21
CDC42EP1-204ENST00000434728 TMEM110Q86TL2 294 aa13.75□□□□□ -0.21
CDC42EP1-204ENST00000434728 PASD1Q8IV76 773 aa13.75□□□□□ -0.21
CDC42EP1-204ENST00000434728 DEFB106AQ8N104 65 aa13.75□□□□□ -0.21
CDC42EP1-204ENST00000434728 SPATA20Q8TB22 786 aa13.75□□□□□ -0.21
CDC42EP1-204ENST00000434728 NAF1Q96HR8 494 aaKnown RBP13.75□□□□□ -0.21
CDC42EP1-204ENST00000434728 FAM81BQ96LP2 452 aa13.75□□□□□ -0.21
CDC42EP1-204ENST00000434728 PRMT1Q99873 361 aaKnown RBP13.75□□□□□ -0.21
CDC42EP1-204ENST00000434728 FUCA2Q9BTY2 467 aa13.75□□□□□ -0.21
CDC42EP1-204ENST00000434728 C2orf49Q9BVC5 232 aaPredicted RBP13.75□□□□□ -0.21
CDC42EP1-204ENST00000434728 ABCG4Q9H172 646 aa13.75□□□□□ -0.21
CDC42EP1-204ENST00000434728 CLSTN2Q9H4D0 955 aa13.75□□□□□ -0.21
CDC42EP1-204ENST00000434728 PRORYQ9H606 182 aa13.75□□□□□ -0.21
CDC42EP1-204ENST00000434728 MAN1B1Q9UKM7 699 aa13.75□□□□□ -0.21
CDC42EP1-204ENST00000434728 PPM1HQ9ULR3 514 aa13.75□□□□□ -0.21
CDC42EP1-204ENST00000434728 RAI2Q9Y5P3 530 aa13.75□□□□□ -0.21
CDC42EP1-204ENST00000434728 TEX51A0A1B0GUA7 166 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms