RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, human

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN4-205	ENST00000433888	KRT36	O76013	467 aa		4.07	□□□□□ -1.76
PTPN4-205	ENST00000433888	TBC1D3H	P0C7X1	549 aa		4.07	□□□□□ -1.76
PTPN4-205	ENST00000433888	UNG	P13051	313 aa	Predicted RBP	4.07	□□□□□ -1.76
PTPN4-205	ENST00000433888	AVPR1A	P37288	418 aa		4.07	□□□□□ -1.76
PTPN4-205	ENST00000433888	TM4SF4	P48230	202 aa		4.07	□□□□□ -1.76
PTPN4-205	ENST00000433888	HILS1	P60008	231 aa		4.07	□□□□□ -1.76
PTPN4-205	ENST00000433888	BNC1	Q01954	994 aa		4.07	□□□□□ -1.76
PTPN4-205	ENST00000433888	POU3F1	Q03052	451 aa	Predicted RBP	4.07	□□□□□ -1.76
PTPN4-205	ENST00000433888	PLCB4	Q15147	1175 aa		4.07	□□□□□ -1.76
PTPN4-205	ENST00000433888	SAFB	Q15424	915 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
PTPN4-205	ENST00000433888	ZRSR1	Q15695	479 aa	Known RBP	4.07	□□□□□ -1.76
PTPN4-205	ENST00000433888	MPEG1	Q2M385	716 aa		4.07	□□□□□ -1.76
PTPN4-205	ENST00000433888	TBC1D3G	Q6DHY5	549 aa		4.07	□□□□□ -1.76
PTPN4-205	ENST00000433888	WBP2NL	Q6ICG8	309 aa		4.07	□□□□□ -1.76
PTPN4-205	ENST00000433888	TBC1D3C	Q6IPX1	549 aa		4.07	□□□□□ -1.76
PTPN4-205	ENST00000433888	KRTAP5-1	Q6L8H4	278 aa		4.07	□□□□□ -1.76
PTPN4-205	ENST00000433888	RINT1	Q6NUQ1	792 aa		4.07	□□□□□ -1.76
PTPN4-205	ENST00000433888	FBXL22	Q6P050	247 aa		4.07	□□□□□ -1.76
PTPN4-205	ENST00000433888	SLC30A9	Q6PML9	568 aa		4.07	□□□□□ -1.76
PTPN4-205	ENST00000433888	TBC1D3	Q8IZP1	549 aa	Predicted RBP	4.07	□□□□□ -1.76
PTPN4-205	ENST00000433888	DPP10	Q8N608	796 aa		4.07	□□□□□ -1.76
PTPN4-205	ENST00000433888	WBP1	Q96G27	269 aa		4.07	□□□□□ -1.76
PTPN4-205	ENST00000433888	DUX5	Q96PT3	197 aa		4.07	□□□□□ -1.76
PTPN4-205	ENST00000433888	FIZ1	Q96SL8	496 aa		4.07	□□□□□ -1.76
PTPN4-205	ENST00000433888		Q9N2J8	555 aa		4.07	□□□□□ -1.76
PTPN4-205	ENST00000433888	ARL15	Q9NXU5	204 aa		4.07	□□□□□ -1.76
PTPN4-205	ENST00000433888		A0A0B4J293	547 aa		4.06	□□□□□ -1.76
PTPN4-205	ENST00000433888	SNRNP70	P08621	437 aa	Known RBP	4.06	□□□□□ -1.76
PTPN4-205	ENST00000433888	HOXB9	P17482	250 aa	Predicted RBP	4.06	□□□□□ -1.76
PTPN4-205	ENST00000433888	THPO	P40225	353 aa		4.06	□□□□□ -1.76
PTPN4-205	ENST00000433888	HSPA7	P48741	367 aa		4.06	□□□□□ -1.76
PTPN4-205	ENST00000433888	TUBA1B	P68363	451 aa		4.06	□□□□□ -1.76
PTPN4-205	ENST00000433888	TRIM60	Q495X7	471 aa		4.06	□□□□□ -1.76
PTPN4-205	ENST00000433888	HEPHL1	Q6MZM0	1159 aa		4.06	□□□□□ -1.76
PTPN4-205	ENST00000433888	MEX3B	Q6ZN04	569 aa	Known RBP	4.06	□□□□□ -1.76
PTPN4-205	ENST00000433888	ANKS1B	Q7Z6G8	1248 aa		4.06	□□□□□ -1.76
PTPN4-205	ENST00000433888	TCP11L2	Q8N4U5	519 aa		4.06	□□□□□ -1.76
PTPN4-205	ENST00000433888	OR14A16	Q8NHC5	309 aa		4.06	□□□□□ -1.76
PTPN4-205	ENST00000433888	TMEM163	Q8TC26	289 aa		4.06	□□□□□ -1.76
PTPN4-205	ENST00000433888	IPO4	Q8TEX9	1081 aa	Known RBP	4.06	□□□□□ -1.76
PTPN4-205	ENST00000433888	TMED6	Q8WW62	240 aa		4.06	□□□□□ -1.76
PTPN4-205	ENST00000433888	RIPOR3	Q96MK2	946 aa		4.06	□□□□□ -1.76
PTPN4-205	ENST00000433888	INPP4A	Q96PE3	977 aa	Predicted RBP	4.06	□□□□□ -1.76
PTPN4-205	ENST00000433888	STK33	Q9BYT3	514 aa		4.06	□□□□□ -1.76
PTPN4-205	ENST00000433888	TP63	Q9H3D4	680 aa	Predicted RBP	4.06	□□□□□ -1.76
PTPN4-205	ENST00000433888	LZTS1	Q9Y250	596 aa		4.06	□□□□□ -1.76
PTPN4-205	ENST00000433888	SHROOM4	Q9ULL8	1493 aa		4.05	□□□□□ -1.76
PTPN4-205	ENST00000433888	MST1R	Q04912	1400 aa		4.05	□□□□□ -1.76
PTPN4-205	ENST00000433888	IGLV5-52	A0A0A0MRZ9	124 aa		4.05	□□□□□ -1.76
PTPN4-205	ENST00000433888	LOC102724159	A0A0B4J2E5	919 aa		4.05	□□□□□ -1.76
PTPN4-205	ENST00000433888	PLSCR5	A0PG75	271 aa		4.05	□□□□□ -1.76
PTPN4-205	ENST00000433888	FAM90A18P	A6NE21	464 aa		4.05	□□□□□ -1.76
PTPN4-205	ENST00000433888	FAM90A16P	A6NEW6	464 aa		4.05	□□□□□ -1.76
PTPN4-205	ENST00000433888	MBD3L5	A6NJ08	208 aa	Predicted RBP	4.05	□□□□□ -1.76
PTPN4-205	ENST00000433888	SAC3D1	A6NKF1	404 aa		4.05	□□□□□ -1.76
PTPN4-205	ENST00000433888	FAM90A9P	A6NNJ1	464 aa		4.05	□□□□□ -1.76
PTPN4-205	ENST00000433888	FAM90A5P	A8MXJ8	464 aa		4.05	□□□□□ -1.76
PTPN4-205	ENST00000433888	RASA4B	C9J798	803 aa		4.05	□□□□□ -1.76
PTPN4-205	ENST00000433888	PIP5K1B	O14986	540 aa		4.05	□□□□□ -1.76
PTPN4-205	ENST00000433888	RASA4	O43374	803 aa		4.05	□□□□□ -1.76
PTPN4-205	ENST00000433888	SOCS5	O75159	536 aa		4.05	□□□□□ -1.76
PTPN4-205	ENST00000433888	FAM90A15P	P0C7V4	464 aa		4.05	□□□□□ -1.76
PTPN4-205	ENST00000433888	FAM90A14P	P0C7W9	464 aa		4.05	□□□□□ -1.76
PTPN4-205	ENST00000433888	NUDT6	P53370	316 aa		4.05	□□□□□ -1.76
PTPN4-205	ENST00000433888	ALDH18A1	P54886	795 aa	Known RBP	4.05	□□□□□ -1.76
PTPN4-205	ENST00000433888	TMPRSS3	P57727	454 aa		4.05	□□□□□ -1.76
PTPN4-205	ENST00000433888	PWP2	Q15269	919 aa	Known RBP	4.05	□□□□□ -1.76
PTPN4-205	ENST00000433888	ZNF569	Q5MCW4	686 aa		4.05	□□□□□ -1.76
PTPN4-205	ENST00000433888	LCE1F	Q5T754	118 aa		4.05	□□□□□ -1.76
PTPN4-205	ENST00000433888	IZUMO3	Q5VZ72	239 aa		4.05	□□□□□ -1.76
PTPN4-205	ENST00000433888	NRSN1	Q8IZ57	195 aa		4.05	□□□□□ -1.76
PTPN4-205	ENST00000433888	RFLNB	Q8N5W9	214 aa		4.05	□□□□□ -1.76
PTPN4-205	ENST00000433888	HORMAD2	Q8N7B1	307 aa		4.05	□□□□□ -1.76
PTPN4-205	ENST00000433888	CEP76	Q8TAP6	659 aa		4.05	□□□□□ -1.76
PTPN4-205	ENST00000433888	TMEM255B	Q8WV15	326 aa		4.05	□□□□□ -1.76
PTPN4-205	ENST00000433888	ZNF333	Q96JL9	665 aa		4.05	□□□□□ -1.76
PTPN4-205	ENST00000433888	TMEM120A	Q9BXJ8	343 aa		4.05	□□□□□ -1.76
PTPN4-205	ENST00000433888	RETREG1	Q9H6L5	497 aa		4.05	□□□□□ -1.76
PTPN4-205	ENST00000433888	SLC22A11	Q9NSA0	550 aa		4.05	□□□□□ -1.76
PTPN4-205	ENST00000433888	TMEM248	Q9NWD8	314 aa		4.05	□□□□□ -1.76
PTPN4-205	ENST00000433888	CNTN6	Q9UQ52	1028 aa		4.05	□□□□□ -1.76
PTPN4-205	ENST00000433888	RAP2C	Q9Y3L5	183 aa		4.05	□□□□□ -1.76
PTPN4-205	ENST00000433888	ASAP2	O43150	1006 aa		4.04	□□□□□ -1.76
PTPN4-205	ENST00000433888	DNPH1	O43598	174 aa		4.04	□□□□□ -1.76
PTPN4-205	ENST00000433888	LARGE1	O95461	756 aa		4.04	□□□□□ -1.76
PTPN4-205	ENST00000433888	IGLV2-11	P01706	119 aa		4.04	□□□□□ -1.76
PTPN4-205	ENST00000433888	MYZAP	P0CAP1	466 aa		4.04	□□□□□ -1.76
PTPN4-205	ENST00000433888	TRIM27	P14373	513 aa		4.04	□□□□□ -1.76
PTPN4-205	ENST00000433888	NAGA	P17050	411 aa		4.04	□□□□□ -1.76
PTPN4-205	ENST00000433888	PRPH2	P23942	346 aa		4.04	□□□□□ -1.76
PTPN4-205	ENST00000433888	CYP2J2	P51589	502 aa		4.04	□□□□□ -1.76
PTPN4-205	ENST00000433888	KRTAP10-12	P60413	245 aa		4.04	□□□□□ -1.76
PTPN4-205	ENST00000433888	SF3A3	Q12874	501 aa	Known RBP eCLIP	4.04	□□□□□ -1.76
PTPN4-205	ENST00000433888	OTUD3	Q5T2D3	398 aa	Predicted RBP	4.04	□□□□□ -1.76
PTPN4-205	ENST00000433888	ATG9B	Q674R7	924 aa		4.04	□□□□□ -1.76
PTPN4-205	ENST00000433888	KIAA1324	Q6UXG2	1013 aa	Known RBP	4.04	□□□□□ -1.76
PTPN4-205	ENST00000433888	FJX1	Q86VR8	437 aa		4.04	□□□□□ -1.76
PTPN4-205	ENST00000433888	FMNL3	Q8IVF7	1028 aa		4.04	□□□□□ -1.76
PTPN4-205	ENST00000433888	OR2C3	Q8N628	320 aa		4.04	□□□□□ -1.76
PTPN4-205	ENST00000433888	ENDOV	Q8N8Q3	282 aa	Known RBP	4.04	□□□□□ -1.76

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