RNA–Protein interactions for RNA: ENST00000433454.3

NEFM-202, Transcript of neurofilament medium, humanhuman

TSL 2 BASIC

Gene NEFM, Length 2,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-202ENST00000433454 C6orf118Q5T5N4 469 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 ZNF534Q76KX8 674 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 RBM23Q86U06 439 aaKnown RBP10.8□□□□□ -0.68
NEFM-202ENST00000433454 TTC16Q8NEE8 873 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 USP33Q8TEY7 942 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 NSMCE1Q8WV22 266 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 ARNTL2Q8WYA1 636 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 MAML1Q92585 1016 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 ARL8AQ96BM9 186 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 LRRC39Q96DD0 335 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 PPP1R2P1Q96PQ5 205 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 GDF15Q99988 308 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 CCDC77Q9BR77 488 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 TMEM109Q9BVC6 243 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 ROPN1BQ9BZX4 212 aaPredicted RBP10.8□□□□□ -0.68
NEFM-202ENST00000433454 LMAN2LQ9H0V9 348 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 NKX2-4Q9H2Z4 354 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 ROPN1Q9HAT0 212 aaPredicted RBP10.8□□□□□ -0.68
NEFM-202ENST00000433454 TMBIM4Q9HC24 238 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 LRRC4CQ9HCJ2 640 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 GOLGA6AQ9NYA3 693 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 CFAP97Q9P2B7 532 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 DNMT3BQ9UBC3 853 aaKnown RBP10.8□□□□□ -0.68
NEFM-202ENST00000433454 CHMP2BQ9UQN3 213 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 ZNF510Q9Y2H8 683 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 SH3BP1Q9Y3L3 701 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 TTLL3Q9Y4R7 772 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 DOCK6Q96HP0 2047 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 HELZP42694 1942 aaKnown RBP10.8□□□□□ -0.68
NEFM-202ENST00000433454 CHD5Q8TDI0 1954 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 ATG2AQ2TAZ0 1938 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 NRG2O14511 850 aaPredicted RBP10.8□□□□□ -0.68
NEFM-202ENST00000433454 SCAMP3O14828 347 aaKnown RBP10.8□□□□□ -0.68
NEFM-202ENST00000433454 TSPAN3O60637 253 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 AVILO75366 819 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 AP2A1O95782 977 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 POU2F2P09086 479 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 MLNP12872 115 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 TSHRP16473 764 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 AVPR1AP37288 418 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 RENBPP51606 427 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 SERINC3Q13530 473 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 HNRNPDQ14103 355 aaKnown RBP10.8□□□□□ -0.68
NEFM-202ENST00000433454 STAT4Q14765 748 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 GPR158Q5T848 1215 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 ADGRD2Q7Z7M1 963 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 CNTD1Q8N815 330 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 HJURPQ8NCD3 748 aaPredicted RBP10.8□□□□□ -0.68
NEFM-202ENST00000433454 PABPC5Q96DU9 382 aaKnown RBP10.8□□□□□ -0.68
NEFM-202ENST00000433454 ZNF419Q96HQ0 510 aaPredicted RBP10.8□□□□□ -0.68
NEFM-202ENST00000433454 ATP6V1G3Q96LB4 118 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 WDR83Q9BRX9 315 aaKnown RBP10.8□□□□□ -0.68
NEFM-202ENST00000433454 SLC46A2Q9BY10 475 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 MAGEH1Q9H213 219 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 TLE6Q9H808 572 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 VPS18Q9P253 973 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 ARHGAP26Q9UNA1 814 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 TEX264Q9Y6I9 313 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.79□□□□□ -0.68
NEFM-202ENST00000433454 HMGB1P1B2RPK0 211 aaPredicted RBP10.79□□□□□ -0.68
NEFM-202ENST00000433454 RASGRF2O14827 1237 aa10.79□□□□□ -0.68
NEFM-202ENST00000433454 POLR3GO15318 223 aaPredicted RBP10.79□□□□□ -0.68
NEFM-202ENST00000433454 ELK3P41970 407 aa10.79□□□□□ -0.68
NEFM-202ENST00000433454 SGSHP51688 502 aa10.79□□□□□ -0.68
NEFM-202ENST00000433454 CBX1P83916 185 aa10.79□□□□□ -0.68
NEFM-202ENST00000433454 GNA12Q03113 381 aa10.79□□□□□ -0.68
NEFM-202ENST00000433454 IL10RBQ08334 325 aa10.79□□□□□ -0.68
NEFM-202ENST00000433454 ZNF177Q13360 481 aaPredicted RBP10.79□□□□□ -0.68
NEFM-202ENST00000433454 LRRC8BQ6P9F7 803 aa10.79□□□□□ -0.68
NEFM-202ENST00000433454 CAPN12Q6ZSI9 719 aa10.79□□□□□ -0.68
NEFM-202ENST00000433454 HTR3DQ70Z44 454 aa10.79□□□□□ -0.68
NEFM-202ENST00000433454 SETD3Q86TU7 594 aaPredicted RBP10.79□□□□□ -0.68
NEFM-202ENST00000433454 PALM2Q8IXS6 379 aa10.79□□□□□ -0.68
NEFM-202ENST00000433454 GDPD5Q8WTR4 605 aa10.79□□□□□ -0.68
NEFM-202ENST00000433454 TCEAL4Q96EI5 215 aa10.79□□□□□ -0.68
NEFM-202ENST00000433454 GORASP1Q9BQQ3 440 aa10.79□□□□□ -0.68
NEFM-202ENST00000433454 PRKD2Q9BZL6 878 aa10.79□□□□□ -0.68
NEFM-202ENST00000433454 SLC28A3Q9HAS3 691 aa10.79□□□□□ -0.68
NEFM-202ENST00000433454 RBM22Q9NW64 420 aaKnown RBP eCLIP10.79□□□□□ -0.68
NEFM-202ENST00000433454 ILVBLA1L0T0 632 aa10.79□□□□□ -0.68
NEFM-202ENST00000433454 SMIM23A6NLE4 172 aa10.79□□□□□ -0.68
NEFM-202ENST00000433454 SOBPA7XYQ1 873 aa10.79□□□□□ -0.68
NEFM-202ENST00000433454 J3KR12 359 aa10.79□□□□□ -0.68
NEFM-202ENST00000433454 CACNG3O60359 315 aa10.79□□□□□ -0.68
NEFM-202ENST00000433454 SPAG6O75602 509 aa10.79□□□□□ -0.68
NEFM-202ENST00000433454 SUN1O94901 812 aa10.79□□□□□ -0.68
NEFM-202ENST00000433454 PEX11BO96011 259 aa10.79□□□□□ -0.68
NEFM-202ENST00000433454 CPP00450 1065 aa10.79□□□□□ -0.68
NEFM-202ENST00000433454 HLA-DQB2P05538 268 aa10.79□□□□□ -0.68
NEFM-202ENST00000433454 ACVRL1P37023 503 aa10.79□□□□□ -0.68
NEFM-202ENST00000433454 GRIA1P42261 906 aa10.79□□□□□ -0.68
NEFM-202ENST00000433454 TEAD2Q15562 447 aa10.79□□□□□ -0.68
NEFM-202ENST00000433454 ZNF697Q5TEC3 545 aa10.79□□□□□ -0.68
NEFM-202ENST00000433454 MARC1Q5VT66 337 aa10.79□□□□□ -0.68
NEFM-202ENST00000433454 KCTD16Q68DU8 428 aa10.79□□□□□ -0.68
NEFM-202ENST00000433454 FAM217AQ8IXS0 508 aa10.79□□□□□ -0.68
NEFM-202ENST00000433454 CMTM8Q8IZV2 173 aa10.79□□□□□ -0.68
NEFM-202ENST00000433454 EPS8L3Q8TE67 593 aaKnown RBP10.79□□□□□ -0.68
NEFM-202ENST00000433454 ARHGEF2Q92974 986 aaKnown RBP10.79□□□□□ -0.68
NEFM-202ENST00000433454 TASP1Q9H6P5 420 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms