RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 RASA4O43374 803 aa18.65■□□□□ 0.58
HMGN1-206ENST00000431390 OPHN1O60890 802 aa18.65■□□□□ 0.58
HMGN1-206ENST00000431390 PRAMEF12O95522 483 aa18.65■□□□□ 0.58
HMGN1-206ENST00000431390 FSHRP23945 695 aa18.65■□□□□ 0.58
HMGN1-206ENST00000431390 PAPOLAP51003 745 aaKnown RBP18.65■□□□□ 0.58
HMGN1-206ENST00000431390 SGSHP51688 502 aa18.65■□□□□ 0.58
HMGN1-206ENST00000431390 ITGA8P53708 1063 aa18.65■□□□□ 0.58
HMGN1-206ENST00000431390 NRLP54845 237 aa18.65■□□□□ 0.58
HMGN1-206ENST00000431390 WASHC5Q12768 1159 aa18.65■□□□□ 0.58
HMGN1-206ENST00000431390 ZNF77Q15935 545 aa18.65■□□□□ 0.58
HMGN1-206ENST00000431390 C6orf118Q5T5N4 469 aa18.65■□□□□ 0.58
HMGN1-206ENST00000431390 HIBCHQ6NVY1 386 aaPredicted RBP18.65■□□□□ 0.58
HMGN1-206ENST00000431390 BMP8AQ7Z5Y6 402 aa18.65■□□□□ 0.58
HMGN1-206ENST00000431390 SETD3Q86TU7 594 aaPredicted RBP18.65■□□□□ 0.58
HMGN1-206ENST00000431390 ARID3BQ8IVW6 561 aaPredicted RBP18.65■□□□□ 0.58
HMGN1-206ENST00000431390 FATE1Q969F0 183 aa18.65■□□□□ 0.58
HMGN1-206ENST00000431390 CAVIN3Q969G5 261 aa18.65■□□□□ 0.58
HMGN1-206ENST00000431390 PBXIP1Q96AQ6 731 aa18.65■□□□□ 0.58
HMGN1-206ENST00000431390 TMA16Q96EY4 203 aaKnown RBP18.65■□□□□ 0.58
HMGN1-206ENST00000431390 ZSWIM3Q96MP5 696 aa18.65■□□□□ 0.58
HMGN1-206ENST00000431390 FMO2Q99518 471 aa18.65■□□□□ 0.58
HMGN1-206ENST00000431390 ADAM7Q9H2U9 754 aa18.65■□□□□ 0.58
HMGN1-206ENST00000431390 MTRF1LQ9UGC7 380 aaKnown RBP18.65■□□□□ 0.58
HMGN1-206ENST00000431390 ANAPC5Q9UJX4 755 aa18.65■□□□□ 0.58
HMGN1-206ENST00000431390 LOC730098B7Z3J9 87 aa18.64■□□□□ 0.58
HMGN1-206ENST00000431390 SMAPO00193 183 aa18.64■□□□□ 0.58
HMGN1-206ENST00000431390 RNF103O00237 685 aa18.64■□□□□ 0.58
HMGN1-206ENST00000431390 TP73O15350 636 aa18.64■□□□□ 0.58
HMGN1-206ENST00000431390 TSPAN3O60637 253 aa18.64■□□□□ 0.58
HMGN1-206ENST00000431390 MAFKO60675 156 aa18.64■□□□□ 0.58
HMGN1-206ENST00000431390 MORF4L2Q15014 288 aa18.64■□□□□ 0.58
HMGN1-206ENST00000431390 POLD3Q15054 466 aaPredicted RBP18.64■□□□□ 0.58
HMGN1-206ENST00000431390 ANKRD20A2Q5SQ80 823 aa18.64■□□□□ 0.58
HMGN1-206ENST00000431390 MPP7Q5T2T1 576 aa18.64■□□□□ 0.58
HMGN1-206ENST00000431390 RNASEH2BQ5TBB1 312 aaKnown RBP18.64■□□□□ 0.58
HMGN1-206ENST00000431390 ANKRD20A1Q5TYW2 823 aa18.64■□□□□ 0.58
HMGN1-206ENST00000431390 ANKRD20A3Q5VUR7 823 aa18.64■□□□□ 0.58
HMGN1-206ENST00000431390 RHBDF2Q6PJF5 856 aa18.64■□□□□ 0.58
HMGN1-206ENST00000431390 HOOK3Q86VS8 718 aa18.64■□□□□ 0.58
HMGN1-206ENST00000431390 TDRD5Q8NAT2 981 aaKnown RBP18.64■□□□□ 0.58
HMGN1-206ENST00000431390 ZSCAN18Q8TBC5 510 aaPredicted RBP18.64■□□□□ 0.58
HMGN1-206ENST00000431390 CCDC110Q8TBZ0 833 aa18.64■□□□□ 0.58
HMGN1-206ENST00000431390 HMCESQ96FZ2 354 aa18.64■□□□□ 0.58
HMGN1-206ENST00000431390 MAGEH1Q9H213 219 aa18.64■□□□□ 0.58
HMGN1-206ENST00000431390 TBC1D14Q9P2M4 693 aa18.64■□□□□ 0.58
HMGN1-206ENST00000431390 TBC1D30Q9Y2I9 924 aa18.64■□□□□ 0.58
HMGN1-206ENST00000431390 USP15Q9Y4E8 981 aaPredicted RBP18.64■□□□□ 0.58
HMGN1-206ENST00000431390 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.64■□□□□ 0.57
HMGN1-206ENST00000431390 MATN3O15232 486 aa18.64■□□□□ 0.57
HMGN1-206ENST00000431390 PTPN3P26045 913 aa18.64■□□□□ 0.57
HMGN1-206ENST00000431390 ZXDAP98168 799 aa18.64■□□□□ 0.57
HMGN1-206ENST00000431390 ZNF177Q13360 481 aaPredicted RBP18.64■□□□□ 0.57
HMGN1-206ENST00000431390 CBX2Q14781 532 aaPredicted RBP18.64■□□□□ 0.57
HMGN1-206ENST00000431390 MPPE1Q53F39 396 aa18.64■□□□□ 0.57
HMGN1-206ENST00000431390 POTEHQ6S545 545 aa18.64■□□□□ 0.57
HMGN1-206ENST00000431390 ZNF783Q6ZMS7 281 aa18.64■□□□□ 0.57
HMGN1-206ENST00000431390 ARHGAP36Q6ZRI8 547 aa18.64■□□□□ 0.57
HMGN1-206ENST00000431390 ARHGEF18Q6ZSZ5 1173 aa18.64■□□□□ 0.57
HMGN1-206ENST00000431390 NPAS3Q8IXF0 933 aa18.64■□□□□ 0.57
HMGN1-206ENST00000431390 PPIL6Q8IXY8 311 aa18.64■□□□□ 0.57
HMGN1-206ENST00000431390 CELF5Q8N6W0 485 aaKnown RBP18.64■□□□□ 0.57
HMGN1-206ENST00000431390 TTC16Q8NEE8 873 aa18.64■□□□□ 0.57
HMGN1-206ENST00000431390 DEPDC1BQ8WUY9 529 aa18.64■□□□□ 0.57
HMGN1-206ENST00000431390 GDE1Q9NZC3 331 aa18.64■□□□□ 0.57
HMGN1-206ENST00000431390 SEPT10Q9P0V9 454 aa18.64■□□□□ 0.57
HMGN1-206ENST00000431390 IPO11Q9UI26 975 aaKnown RBP18.64■□□□□ 0.57
HMGN1-206ENST00000431390 TRHDEQ9UKU6 1024 aa18.64■□□□□ 0.57
HMGN1-206ENST00000431390 SHOC2Q9UQ13 582 aa18.64■□□□□ 0.57
HMGN1-206ENST00000431390 FARP1Q9Y4F1 1045 aaPredicted RBP18.64■□□□□ 0.57
HMGN1-206ENST00000431390 ILVBLA1L0T0 632 aa18.63■□□□□ 0.57
HMGN1-206ENST00000431390 KCNK1O00180 336 aa18.63■□□□□ 0.57
HMGN1-206ENST00000431390 SCAMP3O14828 347 aaKnown RBP18.63■□□□□ 0.57
HMGN1-206ENST00000431390 TBL1XO60907 577 aa18.63■□□□□ 0.57
HMGN1-206ENST00000431390 IFI35P80217 286 aaPredicted RBP18.63■□□□□ 0.57
HMGN1-206ENST00000431390 SERINC3Q13530 473 aa18.63■□□□□ 0.57
HMGN1-206ENST00000431390 ANO4Q32M45 955 aa18.63■□□□□ 0.57
HMGN1-206ENST00000431390 TEX44Q53QW1 395 aa18.63■□□□□ 0.57
HMGN1-206ENST00000431390 ZNF567Q8N184 647 aa18.63■□□□□ 0.57
HMGN1-206ENST00000431390 RIN3Q8TB24 985 aa18.63■□□□□ 0.57
HMGN1-206ENST00000431390 CPT1BQ92523 772 aa18.63■□□□□ 0.57
HMGN1-206ENST00000431390 MAML1Q92585 1016 aa18.63■□□□□ 0.57
HMGN1-206ENST00000431390 OTUB2Q96DC9 234 aa18.63■□□□□ 0.57
HMGN1-206ENST00000431390 APOL5Q9BWW9 433 aa18.63■□□□□ 0.57
HMGN1-206ENST00000431390 FOXP3Q9BZS1 431 aa18.63■□□□□ 0.57
HMGN1-206ENST00000431390 TSPYL1Q9H0U9 437 aa18.63■□□□□ 0.57
HMGN1-206ENST00000431390 IGSF9Q9P2J2 1179 aa18.63■□□□□ 0.57
HMGN1-206ENST00000431390 CHADO15335 359 aa18.62■□□□□ 0.57
HMGN1-206ENST00000431390 LUC7L3O95232 432 aaKnown RBP18.62■□□□□ 0.57
HMGN1-206ENST00000431390 CYBBP04839 570 aa18.62■□□□□ 0.57
HMGN1-206ENST00000431390 RHOCP08134 193 aa18.62■□□□□ 0.57
HMGN1-206ENST00000431390 FAM153BP0C7A2 387 aa18.62■□□□□ 0.57
HMGN1-206ENST00000431390 FDFT1P37268 417 aa18.62■□□□□ 0.57
HMGN1-206ENST00000431390 ETFBP38117 255 aa18.62■□□□□ 0.57
HMGN1-206ENST00000431390 PTPN5P54829 565 aa18.62■□□□□ 0.57
HMGN1-206ENST00000431390 BASP1P80723 227 aaKnown RBP18.62■□□□□ 0.57
HMGN1-206ENST00000431390 GNA12Q03113 381 aa18.62■□□□□ 0.57
HMGN1-206ENST00000431390 FAM153CQ494X1 144 aa18.62■□□□□ 0.57
HMGN1-206ENST00000431390 RNF43Q68DV7 783 aa18.62■□□□□ 0.57
HMGN1-206ENST00000431390 CES5AQ6NT32 575 aa18.62■□□□□ 0.57
HMGN1-206ENST00000431390 SUGP1Q8IWZ8 645 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms