RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 GOLGA7BQ2TAP0 167 aa8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 ACCSLQ4AC99 568 aa8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 MPP7Q5T2T1 576 aa8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 SFMBT2Q5VUG0 894 aa8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 INTS8Q75QN2 995 aaKnown RBP8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 EPM2AIP1Q7L775 607 aaPredicted RBP8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 VASH1Q7L8A9 365 aaPredicted RBP8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 ADIPOR2Q86V24 386 aa8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 PIGZQ86VD9 579 aa8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 FAM217AQ8IXS0 508 aa8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 RNF217Q8TC41 542 aa8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 RFFLQ8WZ73 363 aa8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 OR8D1Q8WZ84 308 aa8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 EDEM1Q92611 657 aa8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 PPP1R9BQ96SB3 815 aa8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 INSM2Q96T92 566 aaPredicted RBP8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 DUSP23Q9BVJ7 150 aa8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 ULBP1Q9BZM6 244 aa8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 TRIM4Q9C037 500 aa8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 OSBPL2Q9H1P3 480 aa8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 BLZF1Q9H2G9 400 aa8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 ZSCAN16Q9H4T2 348 aaPredicted RBP8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 KBTBD4Q9NVX7 518 aa8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 TJP2Q9UDY2 1190 aa8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 SLC25A13Q9UJS0 675 aa8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 PCDHB1Q9Y5F3 818 aa8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 USP3Q9Y6I4 520 aa8.11□□□□□ -1.11
ECHDC1-207ENST00000430841 MGAQ8IWI9 3026 aa8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 PVALEFA0A1B0GWK0 134 aa8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 SPTLC2O15270 562 aa8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 SLC7A4O43246 635 aa8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 MSI1O43347 362 aaKnown RBP8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 BNIP3LO60238 219 aa8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 OPA1O60313 960 aa8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 MOCS2O96007 188 aaPredicted RBP8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 GP1BAP07359 652 aa8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 THEGLP0DJG4 465 aa8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 SFTPCP11686 197 aa8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 RPL13P26373 211 aaKnown RBP8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 MZF1P28698 734 aaPredicted RBP8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 HOXD13P35453 343 aa8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 AFMP43652 599 aa8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 GCLMP48507 274 aa8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 INHBCP55103 352 aa8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 OXCT1P55809 520 aa8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 TBX4P57082 545 aa8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 SULT2A1Q06520 285 aa8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 BST2Q10589 180 aaKnown RBP8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 SLC39A14Q15043 492 aa8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 POM121L1PQ3SYA9 428 aa8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 KIAA1614Q5VZ46 1190 aa8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 RFWD3Q6PCD5 774 aa8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 ATG14Q6ZNE5 492 aa8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 USP53Q70EK8 1073 aa8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 PTAR1Q7Z6K3 402 aaPredicted RBP8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 CHSY1Q86X52 802 aa8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 JAMLQ86YT9 394 aa8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 STK40Q8N2I9 435 aa8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 KDM1BQ8NB78 822 aa8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 OR4C6Q8NH72 309 aa8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 GRAMD1AQ96CP6 724 aa8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 SERPINB11Q96P15 392 aa8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 SPAG5Q96R06 1193 aa8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 TWNKQ96RR1 684 aa8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 MYOCQ99972 504 aa8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 C7orf25Q9BPX7 421 aa8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 TRIM62Q9BVG3 475 aa8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 KRTAP9-9Q9BYP9 154 aa8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 KRTAP9-4Q9BYQ2 154 aa8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 MTG2Q9H4K7 406 aa8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 SERGEFQ9UGK8 458 aa8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 IL17BQ9UHF5 180 aa8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 SFMBT1Q9UHJ3 866 aa8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 IPO11Q9UI26 975 aaKnown RBP8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 ERVW-1Q9UQF0 538 aa8.1□□□□□ -1.11
ECHDC1-207ENST00000430841 ATMQ13315 3056 aa8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 NYNRINQ9P2P1 1898 aaKnown RBP8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 A0A087X0B3 334 aa8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 A0A1W2PR77 199 aa8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 CPED1A4D0V7 1026 aa8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 TTC34A8MYJ7 566 aa8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 XPO1O14980 1071 aaKnown RBP8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 POLR2DO15514 142 aaKnown RBP8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 ACSL4O60488 711 aa8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 CUTAO60888 179 aa8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 RNGTTO60942 597 aaKnown RBP8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 GJB6O95452 261 aa8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 FURINP09958 794 aa8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 TRIM49P0CI25 452 aa8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 TRIM49CP0CI26 452 aa8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 SETSIPP0DME0 302 aa8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 CKMT1AP12532 417 aa8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 LCP1P13796 627 aa8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 MAPK1P28482 360 aa8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 MXI1P50539 228 aa8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 HNRNPKP61978 463 aaKnown RBP eCLIP8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 PPP2CBP62714 309 aa8.09□□□□□ -1.11
ECHDC1-207ENST00000430841 PPP2CAP67775 309 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms