RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 NOMO1Q15155 1222 aa11.25□□□□□ -0.61
CHD4-202ENST00000430771 DGKKQ5KSL6 1271 aa11.25□□□□□ -0.61
CHD4-202ENST00000430771 NAIF1Q69YI7 327 aaPredicted RBP11.25□□□□□ -0.61
CHD4-202ENST00000430771 ASTLQ6HA08 431 aaPredicted RBP11.25□□□□□ -0.61
CHD4-202ENST00000430771 FSTL4Q6MZW2 842 aa11.25□□□□□ -0.61
CHD4-202ENST00000430771 TRMT11Q7Z4G4 463 aaKnown RBP11.25□□□□□ -0.61
CHD4-202ENST00000430771 ADIPOR2Q86V24 386 aa11.25□□□□□ -0.61
CHD4-202ENST00000430771 CDKL3Q8IVW4 592 aaPredicted RBP11.25□□□□□ -0.61
CHD4-202ENST00000430771 APCDD1Q8J025 514 aa11.25□□□□□ -0.61
CHD4-202ENST00000430771 BBS5Q8N3I7 341 aa11.25□□□□□ -0.61
CHD4-202ENST00000430771 KIF18AQ8NI77 898 aa11.25□□□□□ -0.61
CHD4-202ENST00000430771 ACTL9Q8TC94 416 aa11.25□□□□□ -0.61
CHD4-202ENST00000430771 ACTRT1Q8TDG2 376 aa11.25□□□□□ -0.61
CHD4-202ENST00000430771 COG1Q8WTW3 980 aa11.25□□□□□ -0.61
CHD4-202ENST00000430771 CASKIN2Q8WXE0 1202 aa11.25□□□□□ -0.61
CHD4-202ENST00000430771 ZNF592Q92610 1267 aa11.25□□□□□ -0.61
CHD4-202ENST00000430771 SPON2Q9BUD6 331 aa11.25□□□□□ -0.61
CHD4-202ENST00000430771 ACE2Q9BYF1 805 aaPredicted RBP11.25□□□□□ -0.61
CHD4-202ENST00000430771 MFSD1Q9H3U5 465 aa11.25□□□□□ -0.61
CHD4-202ENST00000430771 NOL6Q9H6R4 1146 aaKnown RBP11.25□□□□□ -0.61
CHD4-202ENST00000430771 TBC1D17Q9HA65 648 aa11.25□□□□□ -0.61
CHD4-202ENST00000430771 LTB4R2Q9NPC1 389 aa11.25□□□□□ -0.61
CHD4-202ENST00000430771 RNF14Q9UBS8 474 aa11.25□□□□□ -0.61
CHD4-202ENST00000430771 VPS51Q9UID3 782 aa11.25□□□□□ -0.61
CHD4-202ENST00000430771 INTS6Q9UL03 887 aaKnown RBP11.25□□□□□ -0.61
CHD4-202ENST00000430771 NDRG2Q9UN36 371 aaKnown RBP11.25□□□□□ -0.61
CHD4-202ENST00000430771 SLC8A2Q9UPR5 921 aa11.25□□□□□ -0.61
CHD4-202ENST00000430771 OR51B4Q9Y5P0 310 aa11.25□□□□□ -0.61
CHD4-202ENST00000430771 SHROOM3Q8TF72 1996 aa11.25□□□□□ -0.61
CHD4-202ENST00000430771 A0A0A0MRY4 1105 aa11.24□□□□□ -0.61
CHD4-202ENST00000430771 KRBA1A5PL33 1030 aa11.24□□□□□ -0.61
CHD4-202ENST00000430771 HACD1B0YJ81 288 aa11.24□□□□□ -0.61
CHD4-202ENST00000430771 PRRT4C9JH25 899 aa11.24□□□□□ -0.61
CHD4-202ENST00000430771 FANCGO15287 622 aa11.24□□□□□ -0.61
CHD4-202ENST00000430771 KDELR3O43731 214 aa11.24□□□□□ -0.61
CHD4-202ENST00000430771 ZNF500O60304 480 aaPredicted RBP11.24□□□□□ -0.61
CHD4-202ENST00000430771 PRAMEF11O60813 436 aa11.24□□□□□ -0.61
CHD4-202ENST00000430771 NEBLO76041 1014 aa11.24□□□□□ -0.61
CHD4-202ENST00000430771 MAP3K6O95382 1288 aa11.24□□□□□ -0.61
CHD4-202ENST00000430771 EGFP01133 1207 aa11.24□□□□□ -0.61
CHD4-202ENST00000430771 DLDP09622 509 aaKnown RBP11.24□□□□□ -0.61
CHD4-202ENST00000430771 ACVRL1P37023 503 aa11.24□□□□□ -0.61
CHD4-202ENST00000430771 PAFAH1B1P43034 410 aa11.24□□□□□ -0.61
CHD4-202ENST00000430771 SERPINH1P50454 418 aaKnown RBP11.24□□□□□ -0.61
CHD4-202ENST00000430771 ARF5P84085 180 aa11.24□□□□□ -0.61
CHD4-202ENST00000430771 ECT2LQ008S8 904 aa11.24□□□□□ -0.61
CHD4-202ENST00000430771 CKAP4Q07065 602 aaKnown RBP11.24□□□□□ -0.61
CHD4-202ENST00000430771 IL10RBQ08334 325 aa11.24□□□□□ -0.61
CHD4-202ENST00000430771 ADCY2Q08462 1091 aa11.24□□□□□ -0.61
CHD4-202ENST00000430771 PPIDQ08752 370 aaKnown RBP11.24□□□□□ -0.61
CHD4-202ENST00000430771 XRCC4Q13426 336 aa11.24□□□□□ -0.61
CHD4-202ENST00000430771 RFTN1Q14699 578 aaPredicted RBP11.24□□□□□ -0.61
CHD4-202ENST00000430771 UBXN2BQ14CS0 331 aa11.24□□□□□ -0.61
CHD4-202ENST00000430771 HSF5Q4G112 596 aaPredicted RBP11.24□□□□□ -0.61
CHD4-202ENST00000430771 IER5LQ5T953 404 aa11.24□□□□□ -0.61
CHD4-202ENST00000430771 TMCO4Q5TGY1 634 aa11.24□□□□□ -0.61
CHD4-202ENST00000430771 NPNTQ6UXI9 565 aa11.24□□□□□ -0.61
CHD4-202ENST00000430771 CCDC13Q8IYE1 715 aa11.24□□□□□ -0.61
CHD4-202ENST00000430771 SYNPOQ8N3V7 929 aa11.24□□□□□ -0.61
CHD4-202ENST00000430771 ZNF513Q8N8E2 541 aaPredicted RBP11.24□□□□□ -0.61
CHD4-202ENST00000430771 KCNV2Q8TDN2 545 aa11.24□□□□□ -0.61
CHD4-202ENST00000430771 TFB1MQ8WVM0 346 aaKnown RBP11.24□□□□□ -0.61
CHD4-202ENST00000430771 EDAQ92838 391 aa11.24□□□□□ -0.61
CHD4-202ENST00000430771 TTC17Q96AE7 1141 aa11.24□□□□□ -0.61
CHD4-202ENST00000430771 ALG14Q96F25 216 aa11.24□□□□□ -0.61
CHD4-202ENST00000430771 CAPZA3Q96KX2 299 aa11.24□□□□□ -0.61
CHD4-202ENST00000430771 ZNF599Q96NL3 588 aa11.24□□□□□ -0.61
CHD4-202ENST00000430771 QKIQ96PU8 341 aaKnown RBP eCLIP11.24□□□□□ -0.61
CHD4-202ENST00000430771 NELL2Q99435 816 aa11.24□□□□□ -0.61
CHD4-202ENST00000430771 HERPUD2Q9BSE4 406 aa11.24□□□□□ -0.61
CHD4-202ENST00000430771 HOMER3Q9NSC5 361 aa11.24□□□□□ -0.61
CHD4-202ENST00000430771 ELOVL2Q9NXB9 296 aa11.24□□□□□ -0.61
CHD4-202ENST00000430771 UBA2Q9UBT2 640 aaPredicted RBP11.24□□□□□ -0.61
CHD4-202ENST00000430771 IPO11Q9UI26 975 aaKnown RBP11.24□□□□□ -0.61
CHD4-202ENST00000430771 STARD13Q9Y3M8 1113 aa11.24□□□□□ -0.61
CHD4-202ENST00000430771 NUP205Q92621 2012 aa11.23□□□□□ -0.61
CHD4-202ENST00000430771 TTC28Q96AY4 2481 aa11.23□□□□□ -0.61
CHD4-202ENST00000430771 CFAP69A5D8W1 941 aa11.23□□□□□ -0.61
CHD4-202ENST00000430771 H7C0C1 242 aa11.23□□□□□ -0.61
CHD4-202ENST00000430771 MTSS1O43312 755 aa11.23□□□□□ -0.61
CHD4-202ENST00000430771 SNAP91O60641 907 aa11.23□□□□□ -0.61
CHD4-202ENST00000430771 CCNCP24863 283 aa11.23□□□□□ -0.61
CHD4-202ENST00000430771 TARSP26639 723 aaKnown RBP11.23□□□□□ -0.61
CHD4-202ENST00000430771 MAGEA9P43362 315 aa11.23□□□□□ -0.61
CHD4-202ENST00000430771 ATP5OP48047 213 aa11.23□□□□□ -0.61
CHD4-202ENST00000430771 VASPP50552 380 aaPredicted RBP11.23□□□□□ -0.61
CHD4-202ENST00000430771 EIF3EP60228 445 aaKnown RBP11.23□□□□□ -0.61
CHD4-202ENST00000430771 MRPS21P82921 87 aaKnown RBP11.23□□□□□ -0.61
CHD4-202ENST00000430771 SLC20A2Q08357 652 aa11.23□□□□□ -0.61
CHD4-202ENST00000430771 AP1B1Q10567 949 aa11.23□□□□□ -0.61
CHD4-202ENST00000430771 TUBB2AQ13885 445 aa11.23□□□□□ -0.61
CHD4-202ENST00000430771 CCINQ13939 588 aa11.23□□□□□ -0.61
CHD4-202ENST00000430771 FNDC3BQ53EP0 1204 aaKnown RBP11.23□□□□□ -0.61
CHD4-202ENST00000430771 SLC45A4Q5BKX6 768 aa11.23□□□□□ -0.61
CHD4-202ENST00000430771 HEATR6Q6AI08 1181 aaKnown RBP11.23□□□□□ -0.61
CHD4-202ENST00000430771 ZC3H18Q86VM9 953 aaKnown RBP11.23□□□□□ -0.61
CHD4-202ENST00000430771 KDM1BQ8NB78 822 aa11.23□□□□□ -0.61
CHD4-202ENST00000430771 CCNYQ8ND76 341 aa11.23□□□□□ -0.61
CHD4-202ENST00000430771 FATE1Q969F0 183 aa11.23□□□□□ -0.61
CHD4-202ENST00000430771 IER2Q9BTL4 223 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms