RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 PTGES3LE9PB15 166 aa14.66□□□□□ -0.06
PTPN13-203ENST00000427191 CYB561D2O14569 222 aa14.66□□□□□ -0.06
PTPN13-203ENST00000427191 CHST10O43529 356 aa14.66□□□□□ -0.06
PTPN13-203ENST00000427191 RPL22P35268 128 aaKnown RBP14.66□□□□□ -0.06
PTPN13-203ENST00000427191 TRIM32Q13049 653 aa14.66□□□□□ -0.06
PTPN13-203ENST00000427191 CCNIQ14094 377 aa14.66□□□□□ -0.06
PTPN13-203ENST00000427191 RABL6Q3YEC7 729 aaPredicted RBP14.66□□□□□ -0.06
PTPN13-203ENST00000427191 FAM84BQ96KN1 310 aaPredicted RBP14.66□□□□□ -0.06
PTPN13-203ENST00000427191 LOC100506127A0A0U1RQW1 187 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 CHADO15335 359 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 USP45Q70EL2 814 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 GPSM1Q86YR5 675 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 ZNF513Q8N8E2 541 aaPredicted RBP14.65□□□□□ -0.06
PTPN13-203ENST00000427191 TEFMQ96QE5 360 aaKnown RBP14.65□□□□□ -0.06
PTPN13-203ENST00000427191 NUDT12Q9BQG2 462 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 TMEM121Q9BTD3 319 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 BARX2Q9UMQ3 279 aaPredicted RBP14.65□□□□□ -0.06
PTPN13-203ENST00000427191 H3BQF6 201 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 ACSL4O60488 711 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 RPL9P32969 192 aaKnown RBP14.65□□□□□ -0.06
PTPN13-203ENST00000427191 RPS6KA3P51812 740 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 ZNF268Q14587 947 aaPredicted RBP14.65□□□□□ -0.06
PTPN13-203ENST00000427191 ILDR2Q71H61 639 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 PSMA8Q8TAA3 256 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 RFT1Q96AA3 541 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 GLT1D1Q96MS3 346 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 NECTIN3Q9NQS3 549 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 METTL21EPA6NDL7 271 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 PSMG1O95456 288 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 HLFQ16534 295 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 GLRA4Q5JXX5 417 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 NKAPQ8N5F7 415 aaKnown RBP14.65□□□□□ -0.06
PTPN13-203ENST00000427191 HTR3CQ8WXA8 447 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 GPR101Q96P66 508 aaPredicted RBP14.65□□□□□ -0.06
PTPN13-203ENST00000427191 NUDT14O95848 222 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 HLA-DQA2P01906 255 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 CDH3P22223 829 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 PYDC2Q56P42 97 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 LEF1Q9UJU2 399 aaPredicted RBP14.65□□□□□ -0.06
PTPN13-203ENST00000427191 IKZF3Q9UKT9 509 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 DHFRP00374 187 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 PAEPP09466 180 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 FAM118BQ9BPY3 351 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 ZDHHC9Q9Y397 364 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 MYBL2P10244 700 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 ACO1P21399 889 aaKnown RBP14.65□□□□□ -0.06
PTPN13-203ENST00000427191 DPYSQ14117 519 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 LPIN1Q14693 890 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 PHF10Q8WUB8 498 aaKnown RBP14.65□□□□□ -0.06
PTPN13-203ENST00000427191 LENG1Q96BZ8 264 aaPredicted RBP14.65□□□□□ -0.06
PTPN13-203ENST00000427191 CATSPERZQ9NTU4 200 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 MTF2Q9Y483 593 aaPredicted RBP14.65□□□□□ -0.06
PTPN13-203ENST00000427191 B3GAT3O94766 335 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 SERPINA1P01009 418 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 GSTT1P30711 240 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 OMPP47874 163 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 UGT2B15P54855 530 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 ROR2Q01974 943 aaKnown RBP14.65□□□□□ -0.06
PTPN13-203ENST00000427191 ACSM2AQ08AH3 577 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 ACSM2BQ68CK6 577 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 DENND5AQ6IQ26 1287 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 SNIP1Q8TAD8 396 aaKnown RBP14.65□□□□□ -0.06
PTPN13-203ENST00000427191 STAG3L4Q8TBR4 150 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 ZHX1-C8orf76Q96EF9 292 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 ZNF607Q96SK3 696 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 TBCDQ9BTW9 1192 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 INTS7Q9NVH2 962 aaKnown RBP14.65□□□□□ -0.06
PTPN13-203ENST00000427191 GMIPQ9P107 970 aa14.65□□□□□ -0.06
PTPN13-203ENST00000427191 IFNGP01579 166 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 SRP54P61011 504 aaKnown RBP14.64□□□□□ -0.07
PTPN13-203ENST00000427191 Q4G0T1 1027 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 RFTN2Q52LD8 501 aaPredicted RBP14.64□□□□□ -0.07
PTPN13-203ENST00000427191 PDPRQ8NCN5 879 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 PPP3R2Q96LZ3 170 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 FOXN3O00409 490 aaPredicted RBP14.64□□□□□ -0.07
PTPN13-203ENST00000427191 SUPT20HL2P0C7V6 817 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 CSH1P0DML2 217 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 CSH2P0DML3 217 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 GPD2P43304 727 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 TXNDC11Q6PKC3 985 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 GLT6D1Q7Z4J2 308 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 CCDC177Q9NQR7 707 aaPredicted RBP14.64□□□□□ -0.07
PTPN13-203ENST00000427191 PGRMC2O15173 223 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 MAGEB3O15480 346 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 SERPINB7O75635 380 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 FAM228BP0C875 321 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 PLIN5Q00G26 463 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 TARS2Q9BW92 718 aaKnown RBP14.64□□□□□ -0.07
PTPN13-203ENST00000427191 OSGEPL1Q9H4B0 414 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 ZNF222Q9UK12 451 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 A0A1W2PQ72 361 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 COX7A2P14406 83 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 TYSND1Q2T9J0 566 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 MARK2Q7KZI7 788 aaKnown RBP14.64□□□□□ -0.07
PTPN13-203ENST00000427191 CAPSLQ8WWF8 208 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 CAB39LQ9H9S4 337 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 ZCCHC11Q5TAX3 1644 aaKnown RBP14.64□□□□□ -0.07
PTPN13-203ENST00000427191 CHURC1-FNTBB4DL54 471 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 ZNF879B4DU55 563 aa14.64□□□□□ -0.07
PTPN13-203ENST00000427191 CYP7B1O75881 506 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms