RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 ZNF75CPQ92670 426 aaPredicted RBP16.9■□□□□ 0.3
CMTM3-202ENST00000424011 B3GALT6Q96L58 329 aa16.9■□□□□ 0.3
CMTM3-202ENST00000424011 NEU3Q9UQ49 428 aa16.9■□□□□ 0.3
CMTM3-202ENST00000424011 WDR91A4D1P6 747 aa16.9■□□□□ 0.3
CMTM3-202ENST00000424011 TM9SF1O15321 606 aa16.9■□□□□ 0.3
CMTM3-202ENST00000424011 PSMD3O43242 534 aa16.9■□□□□ 0.3
CMTM3-202ENST00000424011 EDF1O60869 148 aaKnown RBP16.9■□□□□ 0.3
CMTM3-202ENST00000424011 AP2A1O95782 977 aa16.9■□□□□ 0.3
CMTM3-202ENST00000424011 CLTBP09497 229 aa16.9■□□□□ 0.3
CMTM3-202ENST00000424011 HAPLN1P10915 354 aaPredicted RBP16.9■□□□□ 0.3
CMTM3-202ENST00000424011 MLLT6P55198 1093 aaPredicted RBP16.9■□□□□ 0.3
CMTM3-202ENST00000424011 NCALDP61601 193 aa16.9■□□□□ 0.3
CMTM3-202ENST00000424011 IKBKEQ14164 716 aa16.9■□□□□ 0.3
CMTM3-202ENST00000424011 RTP2Q5QGT7 225 aa16.9■□□□□ 0.3
CMTM3-202ENST00000424011 STEAP4Q687X5 459 aa16.9■□□□□ 0.3
CMTM3-202ENST00000424011 ARHGAP22Q7Z5H3 698 aa16.9■□□□□ 0.3
CMTM3-202ENST00000424011 ZNF276Q8N554 614 aa16.9■□□□□ 0.3
CMTM3-202ENST00000424011 FITM2Q8N6M3 262 aa16.9■□□□□ 0.3
CMTM3-202ENST00000424011 SLC39A13Q96H72 371 aa16.9■□□□□ 0.3
CMTM3-202ENST00000424011 PPP1R2P1Q96PQ5 205 aa16.9■□□□□ 0.3
CMTM3-202ENST00000424011 SEPT5Q99719 369 aaPredicted RBP16.9■□□□□ 0.3
CMTM3-202ENST00000424011 GORASP1Q9BQQ3 440 aa16.9■□□□□ 0.3
CMTM3-202ENST00000424011 KLHL14Q9P2G3 628 aa16.9■□□□□ 0.3
CMTM3-202ENST00000424011 ZNF638Q14966 1978 aaKnown RBP16.89■□□□□ 0.29
CMTM3-202ENST00000424011 PGAM1P18669 254 aa16.89■□□□□ 0.29
CMTM3-202ENST00000424011 TUBP50607 506 aa16.89■□□□□ 0.29
CMTM3-202ENST00000424011 USP46P62068 366 aa16.89■□□□□ 0.29
CMTM3-202ENST00000424011 SLC18A2Q05940 514 aa16.89■□□□□ 0.29
CMTM3-202ENST00000424011 LRRC26Q2I0M4 334 aa16.89■□□□□ 0.29
CMTM3-202ENST00000424011 RNF43Q68DV7 783 aa16.89■□□□□ 0.29
CMTM3-202ENST00000424011 DEFB128Q7Z7B8 93 aa16.89■□□□□ 0.29
CMTM3-202ENST00000424011 ATPAF2Q8N5M1 289 aa16.89■□□□□ 0.29
CMTM3-202ENST00000424011 CDKL2Q92772 493 aa16.89■□□□□ 0.29
CMTM3-202ENST00000424011 TTC17Q96AE7 1141 aa16.89■□□□□ 0.29
CMTM3-202ENST00000424011 MTBPQ96DY7 904 aa16.89■□□□□ 0.29
CMTM3-202ENST00000424011 TEKT5Q96M29 485 aa16.89■□□□□ 0.29
CMTM3-202ENST00000424011 ASB3Q9Y575 518 aa16.89■□□□□ 0.29
CMTM3-202ENST00000424011 HS3ST4Q9Y661 456 aa16.89■□□□□ 0.29
CMTM3-202ENST00000424011 FAM159BA6NKW6 160 aa16.88■□□□□ 0.29
CMTM3-202ENST00000424011 NT5C1B-RDH14C9J2C7 533 aa16.88■□□□□ 0.29
CMTM3-202ENST00000424011 E9PAM4 449 aa16.88■□□□□ 0.29
CMTM3-202ENST00000424011 ZBTB24O43167 697 aaPredicted RBP16.88■□□□□ 0.29
CMTM3-202ENST00000424011 UGT1A9O60656 530 aa16.88■□□□□ 0.29
CMTM3-202ENST00000424011 LPXNO60711 386 aa16.88■□□□□ 0.29
CMTM3-202ENST00000424011 KRT38O76015 456 aa16.88■□□□□ 0.29
CMTM3-202ENST00000424011 SNRPAP09012 282 aaKnown RBP16.88■□□□□ 0.29
CMTM3-202ENST00000424011 PYGBP11216 843 aa16.88■□□□□ 0.29
CMTM3-202ENST00000424011 MRPS35P82673 323 aaKnown RBP16.88■□□□□ 0.29
CMTM3-202ENST00000424011 MXRA7P84157 204 aa16.88■□□□□ 0.29
CMTM3-202ENST00000424011 TIGD7Q6NT04 549 aaPredicted RBP16.88■□□□□ 0.29
CMTM3-202ENST00000424011 TRMT10BQ6PF06 316 aaKnown RBP16.88■□□□□ 0.29
CMTM3-202ENST00000424011 RNF19BQ6ZMZ0 732 aa16.88■□□□□ 0.29
CMTM3-202ENST00000424011 TTC9BQ8N6N2 239 aa16.88■□□□□ 0.29
CMTM3-202ENST00000424011 ATP6V0D2Q8N8Y2 350 aa16.88■□□□□ 0.29
CMTM3-202ENST00000424011 FAM81AQ8TBF8 368 aa16.88■□□□□ 0.29
CMTM3-202ENST00000424011 CELF6Q96J87 481 aaKnown RBP16.88■□□□□ 0.29
CMTM3-202ENST00000424011 AGAP3Q96P47 875 aa16.88■□□□□ 0.29
CMTM3-202ENST00000424011 UGT1A7Q9HAW7 530 aa16.88■□□□□ 0.29
CMTM3-202ENST00000424011 UGT1A10Q9HAW8 530 aa16.88■□□□□ 0.29
CMTM3-202ENST00000424011 UGT1A8Q9HAW9 530 aa16.88■□□□□ 0.29
CMTM3-202ENST00000424011 NUDT5Q9UKK9 219 aa16.88■□□□□ 0.29
CMTM3-202ENST00000424011 SLC27A5Q9Y2P5 690 aa16.88■□□□□ 0.29
CMTM3-202ENST00000424011 WDR27A2RRH5 827 aa16.88■□□□□ 0.29
CMTM3-202ENST00000424011 ARHGAP42A6NI28 874 aa16.88■□□□□ 0.29
CMTM3-202ENST00000424011 WASH4PA8MWX3 477 aa16.88■□□□□ 0.29
CMTM3-202ENST00000424011 DFFAO00273 331 aa16.88■□□□□ 0.29
CMTM3-202ENST00000424011 HGSO14964 777 aaPredicted RBP16.88■□□□□ 0.29
CMTM3-202ENST00000424011 ALDH1A2O94788 518 aa16.88■□□□□ 0.29
CMTM3-202ENST00000424011 MOCS2O96007 188 aaPredicted RBP16.88■□□□□ 0.29
CMTM3-202ENST00000424011 CNTFP26441 200 aa16.88■□□□□ 0.29
CMTM3-202ENST00000424011 SERPINB9P50453 376 aa16.88■□□□□ 0.29
CMTM3-202ENST00000424011 NEK3P51956 506 aa16.88■□□□□ 0.29
CMTM3-202ENST00000424011 SESN2P58004 480 aaPredicted RBP16.88■□□□□ 0.29
CMTM3-202ENST00000424011 NAB1Q13506 487 aa16.88■□□□□ 0.29
CMTM3-202ENST00000424011 USP41Q3LFD5 358 aa16.88■□□□□ 0.29
CMTM3-202ENST00000424011 CNKSR3Q6P9H4 555 aa16.88■□□□□ 0.29
CMTM3-202ENST00000424011 CDK5RAP1Q96SZ6 601 aaKnown RBP16.88■□□□□ 0.29
CMTM3-202ENST00000424011 RXFP1Q9HBX9 757 aa16.88■□□□□ 0.29
CMTM3-202ENST00000424011 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.88■□□□□ 0.29
CMTM3-202ENST00000424011 MOCS1Q9NZB8 636 aa16.88■□□□□ 0.29
CMTM3-202ENST00000424011 HCSTQ9UBK5 93 aa16.88■□□□□ 0.29
CMTM3-202ENST00000424011 KIAA0100Q14667 2235 aaKnown RBP16.87■□□□□ 0.29
CMTM3-202ENST00000424011 TRIM49D1C9J1S8 452 aa16.87■□□□□ 0.29
CMTM3-202ENST00000424011 POLBP06746 335 aa16.87■□□□□ 0.29
CMTM3-202ENST00000424011 CSH1P0DML2 217 aa16.87■□□□□ 0.29
CMTM3-202ENST00000424011 CSH2P0DML3 217 aa16.87■□□□□ 0.29
CMTM3-202ENST00000424011 MGAT1P26572 445 aa16.87■□□□□ 0.29
CMTM3-202ENST00000424011 RFC2P35250 354 aa16.87■□□□□ 0.29
CMTM3-202ENST00000424011 KPNA1P52294 538 aaPredicted RBP16.87■□□□□ 0.29
CMTM3-202ENST00000424011 TAF10Q12962 218 aa16.87■□□□□ 0.29
CMTM3-202ENST00000424011 ZBTB17Q13105 803 aa16.87■□□□□ 0.29
CMTM3-202ENST00000424011 LBRQ14739 615 aaKnown RBP16.87■□□□□ 0.29
CMTM3-202ENST00000424011 TRIP4Q15650 581 aaPredicted RBP16.87■□□□□ 0.29
CMTM3-202ENST00000424011 ZNF449Q6P9G9 518 aa16.87■□□□□ 0.29
CMTM3-202ENST00000424011 NECAB2Q7Z6G3 386 aa16.87■□□□□ 0.29
CMTM3-202ENST00000424011 RTL3Q8N8U3 475 aaKnown RBP16.87■□□□□ 0.29
CMTM3-202ENST00000424011 DEPDC1BQ8WUY9 529 aa16.87■□□□□ 0.29
CMTM3-202ENST00000424011 VWCEQ96DN2 955 aa16.87■□□□□ 0.29
CMTM3-202ENST00000424011 APOPT1Q96IL0 206 aa16.87■□□□□ 0.29
CMTM3-202ENST00000424011 BTN2A3PQ96KV6 586 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms