RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 RBL1P28749 1068 aa12.76□□□□□ -0.37
TMEM53-206ENST00000420706 CHRNA3P32297 505 aa12.76□□□□□ -0.37
TMEM53-206ENST00000420706 NUMBP49757 651 aa12.76□□□□□ -0.37
TMEM53-206ENST00000420706 PFKPQ01813 784 aa12.76□□□□□ -0.37
TMEM53-206ENST00000420706 ZNF33AQ06730 810 aa12.76□□□□□ -0.37
TMEM53-206ENST00000420706 IL10RBQ08334 325 aa12.76□□□□□ -0.37
TMEM53-206ENST00000420706 C2orf54Q08AI8 447 aa12.76□□□□□ -0.37
TMEM53-206ENST00000420706 MESP2Q0VG99 397 aa12.76□□□□□ -0.37
TMEM53-206ENST00000420706 AP1B1Q10567 949 aa12.76□□□□□ -0.37
TMEM53-206ENST00000420706 PRKD1Q15139 912 aaPredicted RBP12.76□□□□□ -0.37
TMEM53-206ENST00000420706 GEN1Q17RS7 908 aa12.76□□□□□ -0.37
TMEM53-206ENST00000420706 FUT11Q495W5 492 aa12.76□□□□□ -0.37
TMEM53-206ENST00000420706 SLC45A4Q5BKX6 768 aa12.76□□□□□ -0.37
TMEM53-206ENST00000420706 TJAP1Q5JTD0 557 aa12.76□□□□□ -0.37
TMEM53-206ENST00000420706 IER5LQ5T953 404 aa12.76□□□□□ -0.37
TMEM53-206ENST00000420706 TMEM215Q68D42 235 aa12.76□□□□□ -0.37
TMEM53-206ENST00000420706 MBLAC2Q68D91 279 aa12.76□□□□□ -0.37
TMEM53-206ENST00000420706 NAIF1Q69YI7 327 aaPredicted RBP12.76□□□□□ -0.37
TMEM53-206ENST00000420706 CCDC137Q6PK04 289 aaKnown RBP12.76□□□□□ -0.37
TMEM53-206ENST00000420706 CTAGE6Q86UF2 777 aa12.76□□□□□ -0.37
TMEM53-206ENST00000420706 ADIPOR2Q86V24 386 aa12.76□□□□□ -0.37
TMEM53-206ENST00000420706 ZNF354CQ86Y25 554 aa12.76□□□□□ -0.37
TMEM53-206ENST00000420706 CDKL3Q8IVW4 592 aaPredicted RBP12.76□□□□□ -0.37
TMEM53-206ENST00000420706 CTAGE4Q8IX94 777 aa12.76□□□□□ -0.37
TMEM53-206ENST00000420706 KLHL7Q8IXQ5 586 aa12.76□□□□□ -0.37
TMEM53-206ENST00000420706 ATPAF2Q8N5M1 289 aa12.76□□□□□ -0.37
TMEM53-206ENST00000420706 MNS1Q8NEH6 495 aa12.76□□□□□ -0.37
TMEM53-206ENST00000420706 WFIKKN2Q8TEU8 576 aa12.76□□□□□ -0.37
TMEM53-206ENST00000420706 TTC17Q96AE7 1141 aa12.76□□□□□ -0.37
TMEM53-206ENST00000420706 ACDQ96AP0 544 aa12.76□□□□□ -0.37
TMEM53-206ENST00000420706 QKIQ96PU8 341 aaKnown RBP eCLIP12.76□□□□□ -0.37
TMEM53-206ENST00000420706 PNKPQ96T60 521 aa12.76□□□□□ -0.37
TMEM53-206ENST00000420706 C8orf33Q9H7E9 229 aaPredicted RBP12.76□□□□□ -0.37
TMEM53-206ENST00000420706 USP29Q9HBJ7 922 aa12.76□□□□□ -0.37
TMEM53-206ENST00000420706 HEBP1Q9NRV9 189 aa12.76□□□□□ -0.37
TMEM53-206ENST00000420706 VPS28Q9UK41 221 aa12.76□□□□□ -0.37
TMEM53-206ENST00000420706 DUSP12Q9UNI6 340 aa12.76□□□□□ -0.37
TMEM53-206ENST00000420706 SORCS3Q9UPU3 1222 aa12.76□□□□□ -0.37
TMEM53-206ENST00000420706 ZNF148Q9UQR1 794 aa12.76□□□□□ -0.37
TMEM53-206ENST00000420706 COL4A3Q01955 1670 aa12.76□□□□□ -0.37
TMEM53-206ENST00000420706 MIA3Q5JRA6 1907 aa12.76□□□□□ -0.37
TMEM53-206ENST00000420706 SPECC1L-ADORA2AF8WAN1 911 aa12.75□□□□□ -0.37
TMEM53-206ENST00000420706 CBX4O00257 560 aa12.75□□□□□ -0.37
TMEM53-206ENST00000420706 MATN3O15232 486 aa12.75□□□□□ -0.37
TMEM53-206ENST00000420706 PRAMEF11O60813 436 aa12.75□□□□□ -0.37
TMEM53-206ENST00000420706 CD160O95971 181 aa12.75□□□□□ -0.37
TMEM53-206ENST00000420706 PEX11BO96011 259 aa12.75□□□□□ -0.37
TMEM53-206ENST00000420706 ITGAVP06756 1048 aa12.75□□□□□ -0.37
TMEM53-206ENST00000420706 GLULP15104 373 aa12.75□□□□□ -0.37
TMEM53-206ENST00000420706 STIP1P31948 543 aaKnown RBP12.75□□□□□ -0.37
TMEM53-206ENST00000420706 CTHP32929 405 aa12.75□□□□□ -0.37
TMEM53-206ENST00000420706 FNTAP49354 379 aa12.75□□□□□ -0.37
TMEM53-206ENST00000420706 ARF5P84085 180 aa12.75□□□□□ -0.37
TMEM53-206ENST00000420706 KDSRQ06136 332 aa12.75□□□□□ -0.37
TMEM53-206ENST00000420706 SLC44A4Q53GD3 710 aa12.75□□□□□ -0.37
TMEM53-206ENST00000420706 TIGD7Q6NT04 549 aaPredicted RBP12.75□□□□□ -0.37
TMEM53-206ENST00000420706 TXNDC11Q6PKC3 985 aa12.75□□□□□ -0.37
TMEM53-206ENST00000420706 RALGPS2Q86X27 583 aaPredicted RBP12.75□□□□□ -0.37
TMEM53-206ENST00000420706 RNF135Q8IUD6 432 aa12.75□□□□□ -0.37
TMEM53-206ENST00000420706 AHI1Q8N157 1196 aa12.75□□□□□ -0.37
TMEM53-206ENST00000420706 DCAF4L2Q8NA75 395 aa12.75□□□□□ -0.37
TMEM53-206ENST00000420706 HTR3CQ8WXA8 447 aa12.75□□□□□ -0.37
TMEM53-206ENST00000420706 FATE1Q969F0 183 aa12.75□□□□□ -0.37
TMEM53-206ENST00000420706 KRT12Q99456 494 aa12.75□□□□□ -0.37
TMEM53-206ENST00000420706 P2RY13Q9BPV8 354 aa12.75□□□□□ -0.37
TMEM53-206ENST00000420706 TMEM121Q9BTD3 319 aa12.75□□□□□ -0.37
TMEM53-206ENST00000420706 SP110Q9HB58 689 aa12.75□□□□□ -0.37
TMEM53-206ENST00000420706 PDFQ9HBH1 243 aa12.75□□□□□ -0.37
TMEM53-206ENST00000420706 FBRSL1Q9HCM7 1045 aaKnown RBP12.75□□□□□ -0.37
TMEM53-206ENST00000420706 PCYOX1Q9UHG3 505 aa12.75□□□□□ -0.37
TMEM53-206ENST00000420706 VPS51Q9UID3 782 aa12.75□□□□□ -0.37
TMEM53-206ENST00000420706 HPCAL4Q9UM19 191 aa12.75□□□□□ -0.37
TMEM53-206ENST00000420706 ACTL7AQ9Y615 435 aa12.75□□□□□ -0.37
TMEM53-206ENST00000420706 PIAS3Q9Y6X2 628 aa12.75□□□□□ -0.37
TMEM53-206ENST00000420706 SHROOM3Q8TF72 1996 aa12.74□□□□□ -0.37
TMEM53-206ENST00000420706 EYSQ5T1H1 3165 aa12.74□□□□□ -0.37
TMEM53-206ENST00000420706 CXorf51AA0A1B0GTR3 108 aa12.74□□□□□ -0.37
TMEM53-206ENST00000420706 CFAP69A5D8W1 941 aa12.74□□□□□ -0.37
TMEM53-206ENST00000420706 ZSCAN5CA6NGD5 496 aaPredicted RBP12.74□□□□□ -0.37
TMEM53-206ENST00000420706 SHISA7A6NL88 538 aa12.74□□□□□ -0.37
TMEM53-206ENST00000420706 PRRT4C9JH25 899 aa12.74□□□□□ -0.37
TMEM53-206ENST00000420706 KCNN4O15554 427 aa12.74□□□□□ -0.37
TMEM53-206ENST00000420706 TIMM44O43615 452 aa12.74□□□□□ -0.37
TMEM53-206ENST00000420706 KAT7O95251 611 aa12.74□□□□□ -0.37
TMEM53-206ENST00000420706 POLR2EP19388 210 aaKnown RBP12.74□□□□□ -0.37
TMEM53-206ENST00000420706 GRIA2P42262 883 aa12.74□□□□□ -0.37
TMEM53-206ENST00000420706 PTGIRP43119 386 aa12.74□□□□□ -0.37
TMEM53-206ENST00000420706 CTSOP43234 321 aaPredicted RBP12.74□□□□□ -0.37
TMEM53-206ENST00000420706 GDF10P55107 478 aa12.74□□□□□ -0.37
TMEM53-206ENST00000420706 SULT2A1Q06520 285 aa12.74□□□□□ -0.37
TMEM53-206ENST00000420706 SLC20A2Q08357 652 aa12.74□□□□□ -0.37
TMEM53-206ENST00000420706 HNRNPDQ14103 355 aaKnown RBP12.74□□□□□ -0.37
TMEM53-206ENST00000420706 PREPLQ4J6C6 727 aaPredicted RBP12.74□□□□□ -0.37
TMEM53-206ENST00000420706 FAM182AQ5T1J6 154 aa12.74□□□□□ -0.37
TMEM53-206ENST00000420706 HEATR6Q6AI08 1181 aaKnown RBP12.74□□□□□ -0.37
TMEM53-206ENST00000420706 LEKR1Q6ZMV7 388 aa12.74□□□□□ -0.37
TMEM53-206ENST00000420706 SUGP1Q8IWZ8 645 aaKnown RBP12.74□□□□□ -0.37
TMEM53-206ENST00000420706 CCDC105Q8IYK2 499 aa12.74□□□□□ -0.37
TMEM53-206ENST00000420706 MMGT1Q8N4V1 131 aa12.74□□□□□ -0.37
TMEM53-206ENST00000420706 ALLCQ8N6M5 410 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms