RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 VTA1Q9NP79 307 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 GID8Q9NWU2 228 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 DUS2Q9NX74 493 aaKnown RBP6.22□□□□□ -1.41
CHD2-202ENST00000420239 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.22□□□□□ -1.41
CHD2-202ENST00000420239 DNMT3BQ9UBC3 853 aaKnown RBP6.22□□□□□ -1.41
CHD2-202ENST00000420239 POU2F3Q9UKI9 436 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 TBX20Q9UMR3 447 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 SLC8A2Q9UPR5 921 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 ERVK-11Q9UQG0 969 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 SNX9Q9Y5X1 595 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 A0A1W2PQ67 120 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 F8VP50 259 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 GIPC1O14908 333 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 HTRA2O43464 458 aaPredicted RBP6.22□□□□□ -1.41
CHD2-202ENST00000420239 KDM1AO60341 852 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 CLASP2O75122 1294 aaKnown RBP6.22□□□□□ -1.41
CHD2-202ENST00000420239 RPS6KA4O75676 772 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 BCAS2O75934 225 aaPredicted RBP6.22□□□□□ -1.41
CHD2-202ENST00000420239 RSL1D1O76021 490 aaKnown RBP6.22□□□□□ -1.41
CHD2-202ENST00000420239 ESRRBO95718 433 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 NDUFB10O96000 172 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 C4BPAP04003 597 aaKnown RBP6.22□□□□□ -1.41
CHD2-202ENST00000420239 JAK1P23458 1154 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 HOXA10P31260 410 aaPredicted RBP6.22□□□□□ -1.41
CHD2-202ENST00000420239 HOXA13P31271 388 aaPredicted RBP6.22□□□□□ -1.41
CHD2-202ENST00000420239 CDH5P33151 784 aaPredicted RBP6.22□□□□□ -1.41
CHD2-202ENST00000420239 GABRB2P47870 512 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 SERPINB9P50453 376 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 EIF3EP60228 445 aaKnown RBP6.22□□□□□ -1.41
CHD2-202ENST00000420239 IFITM2Q01629 132 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 DMPKQ09013 629 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 NME3Q13232 169 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 PMS2P3Q13401 168 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 PICALMQ13492 652 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 LSM12Q3MHD2 195 aaKnown RBP6.22□□□□□ -1.41
CHD2-202ENST00000420239 ZACNQ401N2 412 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 SLC9B1Q4ZJI4 515 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 BRDTQ58F21 947 aaPredicted RBP6.22□□□□□ -1.41
CHD2-202ENST00000420239 WDR78Q5VTH9 848 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 GPR107Q5VW38 600 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 SLC9A4Q6AI14 798 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 KRT80Q6KB66 452 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 HMBOX1Q6NT76 420 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 GALNT18Q6P9A2 607 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 MAMDC4Q6UXC1 1216 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 CYS1Q717R9 158 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 MIER3Q7Z3K6 550 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 BTLAQ7Z6A9 289 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 PTAR1Q7Z6K3 402 aaPredicted RBP6.22□□□□□ -1.41
CHD2-202ENST00000420239 DSELQ8IZU8 1212 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 GPD1LQ8N335 351 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 SAMD3Q8N6K7 520 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 FAM71DQ8N9W8 422 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 FAM47BQ8NA70 645 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 TMEM161BQ8NDZ6 487 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 PPP1R14CQ8TAE6 165 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 MAPK15Q8TD08 544 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 ACMSDQ8TDX5 336 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 ADAMTS16Q8TE57 1224 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 PDCD6IPQ8WUM4 868 aaKnown RBP6.22□□□□□ -1.41
CHD2-202ENST00000420239 TRUB1Q8WWH5 349 aaKnown RBP6.22□□□□□ -1.41
CHD2-202ENST00000420239 LRTOMTQ8WZ04 291 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 ATP6V1E2Q96A05 226 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 ACDQ96AP0 544 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 EFHD2Q96C19 240 aaPredicted RBP6.22□□□□□ -1.41
CHD2-202ENST00000420239 LRRC39Q96DD0 335 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 WNK4Q96J92 1243 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 LENG8Q96PV6 779 aaPredicted RBP6.22□□□□□ -1.41
CHD2-202ENST00000420239 OLFM1Q99784 485 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 ZNF577Q9BSK1 485 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 EHD1Q9H4M9 534 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 PDZD7Q9H5P4 517 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 CXorf21Q9HAI6 301 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 C1orf112Q9NSG2 853 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 RIC8BQ9NVN3 520 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 CUEDC1Q9NWM3 386 aaPredicted RBP6.22□□□□□ -1.41
CHD2-202ENST00000420239 ARHGAP28Q9P2N2 729 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 B3GNT3Q9Y2A9 372 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 WDR81Q562E7 1941 aa6.22□□□□□ -1.41
CHD2-202ENST00000420239 A0A087WXM4 84 aa6.21□□□□□ -1.42
CHD2-202ENST00000420239 IQCA1LA6NCM1 817 aa6.21□□□□□ -1.42
CHD2-202ENST00000420239 TRIM64A6NGJ6 449 aa6.21□□□□□ -1.42
CHD2-202ENST00000420239 A6NL46 340 aa6.21□□□□□ -1.42
CHD2-202ENST00000420239 NOP56O00567 594 aaKnown RBP6.21□□□□□ -1.42
CHD2-202ENST00000420239 SLC16A4O15374 487 aa6.21□□□□□ -1.42
CHD2-202ENST00000420239 DHX15O43143 795 aaKnown RBP6.21□□□□□ -1.42
CHD2-202ENST00000420239 JRKO75564 520 aa6.21□□□□□ -1.42
CHD2-202ENST00000420239 CSPG5O95196 566 aa6.21□□□□□ -1.42
CHD2-202ENST00000420239 LSM8O95777 96 aaKnown RBP6.21□□□□□ -1.42
CHD2-202ENST00000420239 SERPINE1P05121 402 aa6.21□□□□□ -1.42
CHD2-202ENST00000420239 PROZP22891 400 aa6.21□□□□□ -1.42
CHD2-202ENST00000420239 GLDCP23378 1020 aa6.21□□□□□ -1.42
CHD2-202ENST00000420239 CNTFP26441 200 aa6.21□□□□□ -1.42
CHD2-202ENST00000420239 IDUAP35475 653 aa6.21□□□□□ -1.42
CHD2-202ENST00000420239 TCF7P36402 384 aaPredicted RBP6.21□□□□□ -1.42
CHD2-202ENST00000420239 CCT8P50990 548 aa6.21□□□□□ -1.42
CHD2-202ENST00000420239 MAPK10P53779 464 aa6.21□□□□□ -1.42
CHD2-202ENST00000420239 SLC25A11Q02978 314 aaKnown RBP6.21□□□□□ -1.42
CHD2-202ENST00000420239 ITGADQ13349 1161 aa6.21□□□□□ -1.42
CHD2-202ENST00000420239 CUL2Q13617 745 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms