RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 MARCH2Q9P0N8 246 aa18.54■□□□□ 0.56
VCP-202ENST00000417448 SERGEFQ9UGK8 458 aa18.54■□□□□ 0.56
VCP-202ENST00000417448 CEP83Q9Y592 693 aa18.54■□□□□ 0.56
VCP-202ENST00000417448 PCDHB1Q9Y5F3 818 aa18.54■□□□□ 0.56
VCP-202ENST00000417448 NYNRINQ9P2P1 1898 aaKnown RBP18.54■□□□□ 0.56
VCP-202ENST00000417448 TMCO5BA8MYB1 307 aa18.53■□□□□ 0.56
VCP-202ENST00000417448 TIMM44O43615 452 aa18.53■□□□□ 0.56
VCP-202ENST00000417448 GJB6O95452 261 aa18.53■□□□□ 0.56
VCP-202ENST00000417448 CYP1A1P04798 512 aaPredicted RBP18.53■□□□□ 0.56
VCP-202ENST00000417448 HOXD9P28356 352 aaPredicted RBP18.53■□□□□ 0.56
VCP-202ENST00000417448 RNASE9P60153 205 aaKnown RBP18.53■□□□□ 0.56
VCP-202ENST00000417448 ZBTB16Q05516 673 aa18.53■□□□□ 0.56
VCP-202ENST00000417448 MMS22LQ6ZRQ5 1243 aa18.53■□□□□ 0.56
VCP-202ENST00000417448 KANSL1Q7Z3B3 1105 aa18.53■□□□□ 0.56
VCP-202ENST00000417448 ZNF677Q86XU0 584 aa18.53■□□□□ 0.56
VCP-202ENST00000417448 FAM217AQ8IXS0 508 aa18.53■□□□□ 0.56
VCP-202ENST00000417448 CACTIN-AS1Q8N1I8 211 aa18.53■□□□□ 0.56
VCP-202ENST00000417448 SCML4Q8N228 414 aa18.53■□□□□ 0.56
VCP-202ENST00000417448 CPXM2Q8N436 756 aa18.53■□□□□ 0.56
VCP-202ENST00000417448 ZNF276Q8N554 614 aa18.53■□□□□ 0.56
VCP-202ENST00000417448 DDI1Q8WTU0 396 aa18.53■□□□□ 0.56
VCP-202ENST00000417448 IRGQQ8WZA9 623 aa18.53■□□□□ 0.56
VCP-202ENST00000417448 NOX5Q96PH1 765 aa18.53■□□□□ 0.56
VCP-202ENST00000417448 TRIM5Q9C035 493 aa18.53■□□□□ 0.56
VCP-202ENST00000417448 MTG2Q9H4K7 406 aa18.53■□□□□ 0.56
VCP-202ENST00000417448 HAUS4Q9H6D7 363 aa18.53■□□□□ 0.56
VCP-202ENST00000417448 A0A1W2PR77 199 aa18.52■□□□□ 0.56
VCP-202ENST00000417448 FAM47DPA6NHR8 397 aa18.52■□□□□ 0.56
VCP-202ENST00000417448 C10orf142B7Z368 130 aa18.52■□□□□ 0.56
VCP-202ENST00000417448 CYBBP04839 570 aa18.52■□□□□ 0.56
VCP-202ENST00000417448 PLEKP08567 350 aaPredicted RBP18.52■□□□□ 0.56
VCP-202ENST00000417448 TNFAIP3P21580 790 aa18.52■□□□□ 0.56
VCP-202ENST00000417448 ILKQ13418 452 aa18.52■□□□□ 0.56
VCP-202ENST00000417448 CLEC16AQ2KHT3 1053 aa18.52■□□□□ 0.56
VCP-202ENST00000417448 TTC31Q49AM3 519 aaPredicted RBP18.52■□□□□ 0.56
VCP-202ENST00000417448 OLFML1Q6UWY5 402 aa18.52■□□□□ 0.56
VCP-202ENST00000417448 ZNF571Q7Z3V5 609 aaPredicted RBP18.52■□□□□ 0.56
VCP-202ENST00000417448 ADIPOR2Q86V24 386 aa18.52■□□□□ 0.56
VCP-202ENST00000417448 XYLT1Q86Y38 959 aa18.52■□□□□ 0.56
VCP-202ENST00000417448 VSTM4Q8IW00 320 aa18.52■□□□□ 0.56
VCP-202ENST00000417448 DEFB106AQ8N104 65 aa18.52■□□□□ 0.56
VCP-202ENST00000417448 C18orf8Q96DM3 657 aa18.52■□□□□ 0.56
VCP-202ENST00000417448 C11orf70Q9BRQ4 267 aa18.52■□□□□ 0.56
VCP-202ENST00000417448 TAS2R14Q9NYV8 317 aa18.52■□□□□ 0.56
VCP-202ENST00000417448 AIPL1Q9NZN9 384 aa18.52■□□□□ 0.56
VCP-202ENST00000417448 CAPN11Q9UMQ6 739 aa18.52■□□□□ 0.56
VCP-202ENST00000417448 BSNQ9UPA5 3926 aa18.52■□□□□ 0.55
VCP-202ENST00000417448 DOCK9Q9BZ29 2069 aa18.51■□□□□ 0.55
VCP-202ENST00000417448 SYNJ2BP-COX16A0A087WUM0 186 aa18.51■□□□□ 0.55
VCP-202ENST00000417448 SLC28A2O43868 658 aa18.51■□□□□ 0.55
VCP-202ENST00000417448 UNGP13051 313 aaPredicted RBP18.51■□□□□ 0.55
VCP-202ENST00000417448 CKMT2P17540 419 aa18.51■□□□□ 0.55
VCP-202ENST00000417448 CD38P28907 300 aa18.51■□□□□ 0.55
VCP-202ENST00000417448 GALCP54803 685 aa18.51■□□□□ 0.55
VCP-202ENST00000417448 PCBP4P57723 403 aaKnown RBP18.51■□□□□ 0.55
VCP-202ENST00000417448 YWHAZP63104 245 aaKnown RBP18.51■□□□□ 0.55
VCP-202ENST00000417448 COG7P83436 770 aa18.51■□□□□ 0.55
VCP-202ENST00000417448 SLC6A3Q01959 620 aa18.51■□□□□ 0.55
VCP-202ENST00000417448 FIGNQ5HY92 759 aa18.51■□□□□ 0.55
VCP-202ENST00000417448 NCEH1Q6PIU2 408 aa18.51■□□□□ 0.55
VCP-202ENST00000417448 KDM7AQ6ZMT4 941 aa18.51■□□□□ 0.55
VCP-202ENST00000417448 CHST9Q7L1S5 443 aa18.51■□□□□ 0.55
VCP-202ENST00000417448 DQX1Q8TE96 717 aaKnown RBP18.51■□□□□ 0.55
VCP-202ENST00000417448 GOLGA1Q92805 767 aa18.51■□□□□ 0.55
VCP-202ENST00000417448 SYT11Q9BT88 431 aa18.51■□□□□ 0.55
VCP-202ENST00000417448 EDEM3Q9BZQ6 932 aa18.51■□□□□ 0.55
VCP-202ENST00000417448 DCLK3Q9C098 648 aa18.51■□□□□ 0.55
VCP-202ENST00000417448 FBRSQ9HAH7 460 aa18.51■□□□□ 0.55
VCP-202ENST00000417448 GDF3Q9NR23 364 aa18.51■□□□□ 0.55
VCP-202ENST00000417448 COX16Q9P0S2 106 aa18.51■□□□□ 0.55
VCP-202ENST00000417448 MYO6Q9UM54 1294 aa18.51■□□□□ 0.55
VCP-202ENST00000417448 LUC7L2Q9Y383 392 aaKnown RBP18.51■□□□□ 0.55
VCP-202ENST00000417448 A0A1W2PQJ5 194 aa18.5■□□□□ 0.55
VCP-202ENST00000417448 YKT6O15498 198 aa18.5■□□□□ 0.55
VCP-202ENST00000417448 LSM8O95777 96 aaKnown RBP18.5■□□□□ 0.55
VCP-202ENST00000417448 TPM3P06753 285 aa18.5■□□□□ 0.55
VCP-202ENST00000417448 ZBED6P86452 979 aa18.5■□□□□ 0.55
VCP-202ENST00000417448 KLHL30Q0D2K2 578 aa18.5■□□□□ 0.55
VCP-202ENST00000417448 DCAF6Q58WW2 860 aa18.5■□□□□ 0.55
VCP-202ENST00000417448 ZNF776Q68DI1 518 aaPredicted RBP18.5■□□□□ 0.55
VCP-202ENST00000417448 SMYD5Q6GMV2 418 aa18.5■□□□□ 0.55
VCP-202ENST00000417448 TMC6Q7Z403 805 aa18.5■□□□□ 0.55
VCP-202ENST00000417448 TADA2BQ86TJ2 420 aa18.5■□□□□ 0.55
VCP-202ENST00000417448 RSPH9Q9H1X1 276 aaPredicted RBP18.5■□□□□ 0.55
VCP-202ENST00000417448 PABPC3Q9H361 631 aaKnown RBP18.5■□□□□ 0.55
VCP-202ENST00000417448 AASDHPPTQ9NRN7 309 aa18.5■□□□□ 0.55
VCP-202ENST00000417448 ABCB8Q9NUT2 735 aa18.5■□□□□ 0.55
VCP-202ENST00000417448 STRIP2Q9ULQ0 834 aa18.5■□□□□ 0.55
VCP-202ENST00000417448 PLA2G4CQ9UP65 541 aa18.5■□□□□ 0.55
VCP-202ENST00000417448 DOPEY2Q9Y3R5 2298 aa18.49■□□□□ 0.55
VCP-202ENST00000417448 FLNCQ14315 2725 aa18.49■□□□□ 0.55
VCP-202ENST00000417448 MPOP05164 745 aa18.49■□□□□ 0.55
VCP-202ENST00000417448 TFE3P19532 575 aaPredicted RBP18.49■□□□□ 0.55
VCP-202ENST00000417448 ACP1P24666 158 aa18.49■□□□□ 0.55
VCP-202ENST00000417448 GABRB2P47870 512 aa18.49■□□□□ 0.55
VCP-202ENST00000417448 UCNP55089 124 aa18.49■□□□□ 0.55
VCP-202ENST00000417448 ADKP55263 362 aaKnown RBP18.49■□□□□ 0.55
VCP-202ENST00000417448 NXPH1P58417 271 aa18.49■□□□□ 0.55
VCP-202ENST00000417448 PTP4A2Q12974 167 aa18.49■□□□□ 0.55
VCP-202ENST00000417448 PROX2Q3B8N5 592 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms