RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 A0A0D9SEW6 157 aa15.89■□□□□ 0.13
SHMT2-202ENST00000414700 DFFAO00273 331 aa15.89■□□□□ 0.13
SHMT2-202ENST00000414700 TBL1XO60907 577 aa15.89■□□□□ 0.13
SHMT2-202ENST00000414700 IFNB1P01574 187 aa15.89■□□□□ 0.13
SHMT2-202ENST00000414700 EZRP15311 586 aaKnown RBP15.89■□□□□ 0.13
SHMT2-202ENST00000414700 FCARP24071 287 aa15.89■□□□□ 0.13
SHMT2-202ENST00000414700 GARSP41250 739 aaKnown RBP15.89■□□□□ 0.13
SHMT2-202ENST00000414700 VPS41P49754 854 aa15.89■□□□□ 0.13
SHMT2-202ENST00000414700 GALNT2Q10471 571 aa15.89■□□□□ 0.13
SHMT2-202ENST00000414700 DHX34Q14147 1143 aaKnown RBP15.89■□□□□ 0.13
SHMT2-202ENST00000414700 FSCBQ5H9T9 825 aa15.89■□□□□ 0.13
SHMT2-202ENST00000414700 AFMIDQ63HM1 303 aa15.89■□□□□ 0.13
SHMT2-202ENST00000414700 GSTA5Q7RTV2 222 aa15.89■□□□□ 0.13
SHMT2-202ENST00000414700 MAATS1Q7Z4T9 603 aa15.89■□□□□ 0.13
SHMT2-202ENST00000414700 CELF5Q8N6W0 485 aaKnown RBP15.89■□□□□ 0.13
SHMT2-202ENST00000414700 SLCO2A1Q92959 643 aa15.89■□□□□ 0.13
SHMT2-202ENST00000414700 TMA16Q96EY4 203 aaKnown RBP15.89■□□□□ 0.13
SHMT2-202ENST00000414700 ASIC4Q96FT7 647 aa15.89■□□□□ 0.13
SHMT2-202ENST00000414700 FRMD8P1Q9BZ68 369 aaPredicted RBP15.89■□□□□ 0.13
SHMT2-202ENST00000414700 GDE1Q9NZC3 331 aa15.89■□□□□ 0.13
SHMT2-202ENST00000414700 CDH7Q9ULB5 785 aa15.89■□□□□ 0.13
SHMT2-202ENST00000414700 CLEC4EQ9ULY5 219 aa15.89■□□□□ 0.13
SHMT2-202ENST00000414700 HMGB1P1B2RPK0 211 aaPredicted RBP15.88■□□□□ 0.13
SHMT2-202ENST00000414700 KCNN4O15554 427 aa15.88■□□□□ 0.13
SHMT2-202ENST00000414700 KRT14P02533 472 aa15.88■□□□□ 0.13
SHMT2-202ENST00000414700 CHKAP35790 457 aa15.88■□□□□ 0.13
SHMT2-202ENST00000414700 GUCY2DQ02846 1103 aa15.88■□□□□ 0.13
SHMT2-202ENST00000414700 AP1B1Q10567 949 aa15.88■□□□□ 0.13
SHMT2-202ENST00000414700 PPP1R7Q15435 360 aa15.88■□□□□ 0.13
SHMT2-202ENST00000414700 SLC45A4Q5BKX6 768 aa15.88■□□□□ 0.13
SHMT2-202ENST00000414700 TRIM68Q6AZZ1 485 aa15.88■□□□□ 0.13
SHMT2-202ENST00000414700 TANGO2Q6ICL3 276 aa15.88■□□□□ 0.13
SHMT2-202ENST00000414700 TMEM25Q86YD3 366 aa15.88■□□□□ 0.13
SHMT2-202ENST00000414700 IFT20Q8IY31 132 aa15.88■□□□□ 0.13
SHMT2-202ENST00000414700 UMODL1-AS1Q8N2C9 162 aa15.88■□□□□ 0.13
SHMT2-202ENST00000414700 CPXM2Q8N436 756 aa15.88■□□□□ 0.13
SHMT2-202ENST00000414700 ZFYVE19Q96K21 471 aa15.88■□□□□ 0.13
SHMT2-202ENST00000414700 QKIQ96PU8 341 aaKnown RBP eCLIP15.88■□□□□ 0.13
SHMT2-202ENST00000414700 DDX50Q9BQ39 737 aaKnown RBP15.88■□□□□ 0.13
SHMT2-202ENST00000414700 CEP41Q9BYV8 373 aa15.88■□□□□ 0.13
SHMT2-202ENST00000414700 ZNF510Q9Y2H8 683 aa15.88■□□□□ 0.13
SHMT2-202ENST00000414700 USP15Q9Y4E8 981 aaPredicted RBP15.88■□□□□ 0.13
SHMT2-202ENST00000414700 A0A1B0GVM2 712 aa15.87■□□□□ 0.13
SHMT2-202ENST00000414700 TCAF2A6NFQ2 919 aa15.87■□□□□ 0.13
SHMT2-202ENST00000414700 KCNK1O00180 336 aa15.87■□□□□ 0.13
SHMT2-202ENST00000414700 TCF3P15923 654 aa15.87■□□□□ 0.13
SHMT2-202ENST00000414700 KCNA5P22460 613 aa15.87■□□□□ 0.13
SHMT2-202ENST00000414700 HOXD9P28356 352 aaPredicted RBP15.87■□□□□ 0.13
SHMT2-202ENST00000414700 GBP2P32456 591 aaPredicted RBP15.87■□□□□ 0.13
SHMT2-202ENST00000414700 ACVRL1P37023 503 aa15.87■□□□□ 0.13
SHMT2-202ENST00000414700 CDH4P55283 916 aa15.87■□□□□ 0.13
SHMT2-202ENST00000414700 XRCC4Q13426 336 aa15.87■□□□□ 0.13
SHMT2-202ENST00000414700 PDK1Q15118 436 aa15.87■□□□□ 0.13
SHMT2-202ENST00000414700 PRKD1Q15139 912 aaPredicted RBP15.87■□□□□ 0.13
SHMT2-202ENST00000414700 CXorf57Q6NSI4 855 aaKnown RBP15.87■□□□□ 0.13
SHMT2-202ENST00000414700 CYB5D1Q6P9G0 228 aa15.87■□□□□ 0.13
SHMT2-202ENST00000414700 TAB3Q8N5C8 712 aaPredicted RBP15.87■□□□□ 0.13
SHMT2-202ENST00000414700 DDI1Q8WTU0 396 aa15.87■□□□□ 0.13
SHMT2-202ENST00000414700 TFB1MQ8WVM0 346 aaKnown RBP15.87■□□□□ 0.13
SHMT2-202ENST00000414700 HMCESQ96FZ2 354 aa15.87■□□□□ 0.13
SHMT2-202ENST00000414700 ATP6V1G3Q96LB4 118 aa15.87■□□□□ 0.13
SHMT2-202ENST00000414700 RIPOR3Q96MK2 946 aa15.87■□□□□ 0.13
SHMT2-202ENST00000414700 DPH5Q9H2P9 285 aa15.87■□□□□ 0.13
SHMT2-202ENST00000414700 EPB41L5Q9HCM4 733 aa15.87■□□□□ 0.13
SHMT2-202ENST00000414700 BCLAF3A2AJT9 711 aaKnown RBP15.87■□□□□ 0.13
SHMT2-202ENST00000414700 CLDN11O75508 207 aa15.87■□□□□ 0.13
SHMT2-202ENST00000414700 WEE1P30291 646 aa15.87■□□□□ 0.13
SHMT2-202ENST00000414700 SLC8A1P32418 973 aa15.87■□□□□ 0.13
SHMT2-202ENST00000414700 PAPOLAP51003 745 aaKnown RBP15.87■□□□□ 0.13
SHMT2-202ENST00000414700 IFFO1Q0D2I5 559 aa15.87■□□□□ 0.13
SHMT2-202ENST00000414700 BZW1Q7L1Q6 419 aaKnown RBP15.87■□□□□ 0.13
SHMT2-202ENST00000414700 TAX1BP1Q86VP1 789 aa15.87■□□□□ 0.13
SHMT2-202ENST00000414700 ADGRG2Q8IZP9 1017 aa15.87■□□□□ 0.13
SHMT2-202ENST00000414700 CARNMT1Q8N4J0 409 aa15.87■□□□□ 0.13
SHMT2-202ENST00000414700 LZTR1Q8N653 840 aa15.87■□□□□ 0.13
SHMT2-202ENST00000414700 DEFB123Q8N688 67 aa15.87■□□□□ 0.13
SHMT2-202ENST00000414700 RSAD2Q8WXG1 361 aa15.87■□□□□ 0.13
SHMT2-202ENST00000414700 HDAC11Q96DB2 347 aa15.87■□□□□ 0.13
SHMT2-202ENST00000414700 ZNF419Q96HQ0 510 aaPredicted RBP15.87■□□□□ 0.13
SHMT2-202ENST00000414700 SGSM3Q96HU1 749 aa15.87■□□□□ 0.13
SHMT2-202ENST00000414700 HEPACAM2A8MVW5 462 aa15.86■□□□□ 0.13
SHMT2-202ENST00000414700 RASA4BC9J798 803 aa15.86■□□□□ 0.13
SHMT2-202ENST00000414700 RASA4O43374 803 aa15.86■□□□□ 0.13
SHMT2-202ENST00000414700 MAFKO60675 156 aa15.86■□□□□ 0.13
SHMT2-202ENST00000414700 RAMP2O60895 175 aa15.86■□□□□ 0.13
SHMT2-202ENST00000414700 MAPKAPK2P49137 400 aa15.86■□□□□ 0.13
SHMT2-202ENST00000414700 SEC24CP53992 1094 aa15.86■□□□□ 0.13
SHMT2-202ENST00000414700 CLNS1AP54105 237 aaKnown RBP15.86■□□□□ 0.13
SHMT2-202ENST00000414700 IRX1P78414 480 aaPredicted RBP15.86■□□□□ 0.13
SHMT2-202ENST00000414700 PPIDQ08752 370 aaKnown RBP15.86■□□□□ 0.13
SHMT2-202ENST00000414700 FYB2Q5VWT5 728 aa15.86■□□□□ 0.13
SHMT2-202ENST00000414700 HEATR6Q6AI08 1181 aaKnown RBP15.86■□□□□ 0.13
SHMT2-202ENST00000414700 TLDC1Q6P9B6 456 aa15.86■□□□□ 0.13
SHMT2-202ENST00000414700 ARFGAP2Q8N6H7 521 aa15.86■□□□□ 0.13
SHMT2-202ENST00000414700 HJURPQ8NCD3 748 aaPredicted RBP15.86■□□□□ 0.13
SHMT2-202ENST00000414700 OR7D4Q8NG98 312 aa15.86■□□□□ 0.13
SHMT2-202ENST00000414700 GRK7Q8WTQ7 553 aa15.86■□□□□ 0.13
SHMT2-202ENST00000414700 HTR3CQ8WXA8 447 aa15.86■□□□□ 0.13
SHMT2-202ENST00000414700 SUSD6Q92537 303 aa15.86■□□□□ 0.13
SHMT2-202ENST00000414700 FGF14Q92915 247 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms