RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 ZCCHC7Q8N3Z6 543 aaKnown RBP3.74□□□□□ -1.81
SF3B1-203ENST00000414174 LIX1Q8N485 282 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 AOPEPQ8N6M6 819 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 IGSF22Q8N9C0 903 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 ATG16L2Q8NAA4 619 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 OR13C2Q8NGS9 318 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 PIP4K2CQ8TBX8 421 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 URGCPQ8TCY9 931 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 ZNF384Q8TF68 577 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 HASPINQ8TF76 798 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 ATL1Q8WXF7 558 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 ST8SIA4Q92187 359 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 DIO2Q92813 273 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 ZNF653Q96CK0 615 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 FAM120BQ96EK7 910 aaKnown RBP3.74□□□□□ -1.81
SF3B1-203ENST00000414174 ALG14Q96F25 216 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 HMCESQ96FZ2 354 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 CHMP6Q96FZ7 201 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 CALML4Q96GE6 196 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 MASTLQ96GX5 879 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 FCRL2Q96LA5 508 aaPredicted RBP3.74□□□□□ -1.81
SF3B1-203ENST00000414174 TEKT5Q96M29 485 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 CDRT15Q96T59 188 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 SELENOSQ9BQE4 189 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 THUMPD3Q9BV44 507 aaKnown RBP3.74□□□□□ -1.81
SF3B1-203ENST00000414174 CINPQ9BW66 212 aaPredicted RBP3.74□□□□□ -1.81
SF3B1-203ENST00000414174 BTBD2Q9BX70 525 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 STRA6Q9BX79 667 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 B3GNT5Q9BYG0 378 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 SHCBP1LQ9BZQ2 653 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 MKRN2Q9H000 416 aaKnown RBP3.74□□□□□ -1.81
SF3B1-203ENST00000414174 THAP2Q9H0W7 228 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 ASCC2Q9H1I8 757 aaPredicted RBP3.74□□□□□ -1.81
SF3B1-203ENST00000414174 WNT8AQ9H1J5 351 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 RHBGQ9H310 441 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 TMEM8AQ9HCN3 771 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 TUFT1Q9NNX1 390 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 ARHGEF4Q9NR80 690 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 AGPAT5Q9NUQ2 364 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 RAB20Q9NX57 234 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.74□□□□□ -1.81
SF3B1-203ENST00000414174 VPS54Q9P1Q0 977 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 WHRNQ9P202 907 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 APPL1Q9UKG1 709 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 TMCO1Q9UM00 188 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 LIPT1Q9Y234 373 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 NUDCQ9Y266 331 aa3.74□□□□□ -1.81
SF3B1-203ENST00000414174 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.73□□□□□ -1.81
SF3B1-203ENST00000414174 A0A0A6YYJ9 748 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 GOLGA8QA0A0J9YX86 632 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 A0A1W2PPW3 197 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 ARHGEF37A1IGU5 675 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 A4D1N5 150 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 GOLGA8OA6NCC3 632 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 KPNA7A9QM74 516 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 C1QTNF3-AMACRE9PGA6 284 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 GOLGA8NF8WBI6 632 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 SLCO1B7G3V0H7 640 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 H0Y8X5 98 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 MEIS2O14770 477 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 ATP2A1O14983 1001 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 TP73O15350 636 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 CLDN3O15551 220 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 PRODHO43272 600 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 HNRNPRO43390 633 aaKnown RBP3.73□□□□□ -1.81
SF3B1-203ENST00000414174 TRAPPC3O43617 180 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 B3GALT2O43825 422 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 PRICKLE3O43900 615 aaPredicted RBP3.73□□□□□ -1.81
SF3B1-203ENST00000414174 TBC1D4O60343 1298 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 TLR2O60603 784 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 CDC123O75794 336 aaPredicted RBP3.73□□□□□ -1.81
SF3B1-203ENST00000414174 KRT37O76014 449 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 SCAF4O95104 1147 aaKnown RBP3.73□□□□□ -1.81
SF3B1-203ENST00000414174 CCNDBP1O95273 360 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 FSHBP01225 129 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 APOEP02649 317 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 ALDH2P05091 517 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 HMOX1P09601 288 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 CSF1P09603 554 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 JMJD7P0C870 316 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 STAG3L3P0CL85 134 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 SELLP14151 372 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 TSHRP16473 764 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 PRKACAP17612 351 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 CHRM3P20309 590 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 M6PRP20645 277 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 CTSSP25774 331 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 RRM2P31350 389 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 BMP8BP34820 402 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 IGFALSP35858 605 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 SERPINF1P36955 418 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 GARSP41250 739 aaKnown RBP3.73□□□□□ -1.81
SF3B1-203ENST00000414174 CASP3P42574 277 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 PIP4K2AP48426 406 aaPredicted RBP3.73□□□□□ -1.81
SF3B1-203ENST00000414174 DNM2P50570 870 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 CCR5P51681 352 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 CLCNKAP51800 687 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 HMGA2P52926 109 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 EPHB3P54753 998 aa3.73□□□□□ -1.81
SF3B1-203ENST00000414174 RAB14P61106 215 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms