RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 NKD2Q969F2 451 aaPredicted RBP13.48□□□□□ -0.25
HDAC8-210ENST00000412342 FAM122AQ96E09 287 aa13.48□□□□□ -0.25
HDAC8-210ENST00000412342 MAGEH1Q9H213 219 aa13.48□□□□□ -0.25
HDAC8-210ENST00000412342 LRRC19Q9H756 370 aa13.48□□□□□ -0.25
HDAC8-210ENST00000412342 CATSPERBQ9H7T0 1116 aa13.48□□□□□ -0.25
HDAC8-210ENST00000412342 ZWILCHQ9H900 591 aa13.48□□□□□ -0.25
HDAC8-210ENST00000412342 PCDH18Q9HCL0 1135 aa13.48□□□□□ -0.25
HDAC8-210ENST00000412342 ATP13A1Q9HD20 1204 aa13.48□□□□□ -0.25
HDAC8-210ENST00000412342 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.48□□□□□ -0.25
HDAC8-210ENST00000412342 USP36Q9P275 1121 aaKnown RBP13.48□□□□□ -0.25
HDAC8-210ENST00000412342 BCCIPQ9P287 314 aaKnown RBP eCLIP13.48□□□□□ -0.25
HDAC8-210ENST00000412342 SUN2Q9UH99 717 aa13.48□□□□□ -0.25
HDAC8-210ENST00000412342 MBD1Q9UIS9 605 aaPredicted RBP13.48□□□□□ -0.25
HDAC8-210ENST00000412342 SLC25A13Q9UJS0 675 aa13.48□□□□□ -0.25
HDAC8-210ENST00000412342 SMG5Q9UPR3 1016 aaKnown RBP13.48□□□□□ -0.25
HDAC8-210ENST00000412342 EDDM13A0A1B0GTR0 161 aa13.47□□□□□ -0.25
HDAC8-210ENST00000412342 CXorf51AA0A1B0GTR3 108 aa13.47□□□□□ -0.25
HDAC8-210ENST00000412342 K7ERQ8 282 aa13.47□□□□□ -0.25
HDAC8-210ENST00000412342 SMAD6O43541 496 aaKnown RBP13.47□□□□□ -0.25
HDAC8-210ENST00000412342 RAMP2O60895 175 aa13.47□□□□□ -0.25
HDAC8-210ENST00000412342 ZNF821O75541 412 aaPredicted RBP13.47□□□□□ -0.25
HDAC8-210ENST00000412342 IGLV3-19P01714 112 aa13.47□□□□□ -0.25
HDAC8-210ENST00000412342 ERCC2P18074 760 aa13.47□□□□□ -0.25
HDAC8-210ENST00000412342 ARHGAP25P42331 645 aa13.47□□□□□ -0.25
HDAC8-210ENST00000412342 YBEYP58557 167 aaPredicted RBP13.47□□□□□ -0.25
HDAC8-210ENST00000412342 RPS14P62263 151 aaKnown RBP13.47□□□□□ -0.25
HDAC8-210ENST00000412342 KRT83P78385 493 aa13.47□□□□□ -0.25
HDAC8-210ENST00000412342 SIM2Q14190 667 aaPredicted RBP13.47□□□□□ -0.25
HDAC8-210ENST00000412342 MESDQ14696 234 aa13.47□□□□□ -0.25
HDAC8-210ENST00000412342 ATP13A4Q4VNC1 1196 aa13.47□□□□□ -0.25
HDAC8-210ENST00000412342 PPP6R3Q5H9R7 873 aaPredicted RBP13.47□□□□□ -0.25
HDAC8-210ENST00000412342 AFMIDQ63HM1 303 aa13.47□□□□□ -0.25
HDAC8-210ENST00000412342 LINGO4Q6UY18 593 aa13.47□□□□□ -0.25
HDAC8-210ENST00000412342 KBTBD6Q86V97 674 aa13.47□□□□□ -0.25
HDAC8-210ENST00000412342 TMPRSS6Q8IU80 811 aa13.47□□□□□ -0.25
HDAC8-210ENST00000412342 ARHGAP12Q8IWW6 846 aa13.47□□□□□ -0.25
HDAC8-210ENST00000412342 ABCA7Q8IZY2 2146 aa13.47□□□□□ -0.25
HDAC8-210ENST00000412342 FAM160A2Q8N612 972 aaPredicted RBP13.47□□□□□ -0.25
HDAC8-210ENST00000412342 NPWQ8N729 165 aa13.47□□□□□ -0.25
HDAC8-210ENST00000412342 ACRBPQ8NEB7 543 aa13.47□□□□□ -0.25
HDAC8-210ENST00000412342 HSPH1Q92598 858 aa13.47□□□□□ -0.25
HDAC8-210ENST00000412342 ZC3H10Q96K80 434 aaKnown RBP13.47□□□□□ -0.25
HDAC8-210ENST00000412342 CSPG4P5Q96PW8 444 aa13.47□□□□□ -0.25
HDAC8-210ENST00000412342 FAM129BQ96TA1 746 aa13.47□□□□□ -0.25
HDAC8-210ENST00000412342 RSPH9Q9H1X1 276 aaPredicted RBP13.47□□□□□ -0.25
HDAC8-210ENST00000412342 FBRSQ9HAH7 460 aa13.47□□□□□ -0.25
HDAC8-210ENST00000412342 GRPEL1Q9HAV7 217 aa13.47□□□□□ -0.25
HDAC8-210ENST00000412342 PRDM16Q9HAZ2 1276 aa13.47□□□□□ -0.25
HDAC8-210ENST00000412342 SALL4Q9UJQ4 1053 aa13.47□□□□□ -0.25
HDAC8-210ENST00000412342 INVSQ9Y283 1065 aa13.47□□□□□ -0.25
HDAC8-210ENST00000412342 ACTL7AQ9Y615 435 aa13.47□□□□□ -0.25
HDAC8-210ENST00000412342 THADAQ6YHU6 1953 aa13.47□□□□□ -0.25
HDAC8-210ENST00000412342 A0A0A6YYK5 440 aaPredicted RBP13.46□□□□□ -0.25
HDAC8-210ENST00000412342 IGHV1OR15-9A0A0B4J2B8 117 aa13.46□□□□□ -0.25
HDAC8-210ENST00000412342 RASA4BC9J798 803 aa13.46□□□□□ -0.25
HDAC8-210ENST00000412342 CBX4O00257 560 aa13.46□□□□□ -0.25
HDAC8-210ENST00000412342 PJA2O43164 708 aa13.46□□□□□ -0.25
HDAC8-210ENST00000412342 RASA4O43374 803 aa13.46□□□□□ -0.25
HDAC8-210ENST00000412342 LMNAP02545 664 aaKnown RBP13.46□□□□□ -0.25
HDAC8-210ENST00000412342 CD48P09326 243 aa13.46□□□□□ -0.25
HDAC8-210ENST00000412342 ETFBP38117 255 aa13.46□□□□□ -0.25
HDAC8-210ENST00000412342 SERPINH1P50454 418 aaKnown RBP13.46□□□□□ -0.25
HDAC8-210ENST00000412342 CLCN6P51797 869 aa13.46□□□□□ -0.25
HDAC8-210ENST00000412342 POLD3Q15054 466 aaPredicted RBP13.46□□□□□ -0.25
HDAC8-210ENST00000412342 SPA17Q15506 151 aa13.46□□□□□ -0.25
HDAC8-210ENST00000412342 DLG2Q15700 870 aa13.46□□□□□ -0.25
HDAC8-210ENST00000412342 PARP15Q460N3 678 aa13.46□□□□□ -0.25
HDAC8-210ENST00000412342 PLK5Q496M5 336 aa13.46□□□□□ -0.25
HDAC8-210ENST00000412342 USP39Q53GS9 565 aaKnown RBP13.46□□□□□ -0.25
HDAC8-210ENST00000412342 PGBD3Q8N328 593 aa13.46□□□□□ -0.25
HDAC8-210ENST00000412342 VOPP1Q96AW1 172 aa13.46□□□□□ -0.25
HDAC8-210ENST00000412342 HMCESQ96FZ2 354 aa13.46□□□□□ -0.25
HDAC8-210ENST00000412342 SPON2Q9BUD6 331 aa13.46□□□□□ -0.25
HDAC8-210ENST00000412342 DUSP15Q9H1R2 295 aaPredicted RBP13.46□□□□□ -0.25
HDAC8-210ENST00000412342 PDFQ9HBH1 243 aa13.46□□□□□ -0.25
HDAC8-210ENST00000412342 ITM2CQ9NQX7 267 aa13.46□□□□□ -0.25
HDAC8-210ENST00000412342 ETNK2Q9NVF9 386 aa13.46□□□□□ -0.25
HDAC8-210ENST00000412342 MFHAS1Q9Y4C4 1052 aa13.46□□□□□ -0.25
HDAC8-210ENST00000412342 ZFHX2Q9C0A1 2572 aaPredicted RBP13.46□□□□□ -0.26
HDAC8-210ENST00000412342 TMEM110-MUSTN1A8MSY1 372 aa13.45□□□□□ -0.26
HDAC8-210ENST00000412342 H3BRJ5 948 aa13.45□□□□□ -0.26
HDAC8-210ENST00000412342 KDELR3O43731 214 aa13.45□□□□□ -0.26
HDAC8-210ENST00000412342 NNMTP40261 264 aa13.45□□□□□ -0.26
HDAC8-210ENST00000412342 TPMTP51580 245 aa13.45□□□□□ -0.26
HDAC8-210ENST00000412342 VAV2P52735 878 aa13.45□□□□□ -0.26
HDAC8-210ENST00000412342 NDST2P52849 883 aa13.45□□□□□ -0.26
HDAC8-210ENST00000412342 GSDMDP57764 484 aa13.45□□□□□ -0.26
HDAC8-210ENST00000412342 SERINC3Q13530 473 aa13.45□□□□□ -0.26
HDAC8-210ENST00000412342 DPYSL3Q14195 570 aa13.45□□□□□ -0.26
HDAC8-210ENST00000412342 ELAVL3Q14576 367 aaKnown RBP13.45□□□□□ -0.26
HDAC8-210ENST00000412342 HADHQ16836 314 aaKnown RBP13.45□□□□□ -0.26
HDAC8-210ENST00000412342 PMS2CLQ68D20 193 aa13.45□□□□□ -0.26
HDAC8-210ENST00000412342 IL31Q6EBC2 164 aa13.45□□□□□ -0.26
HDAC8-210ENST00000412342 RETSATQ6NUM9 610 aa13.45□□□□□ -0.26
HDAC8-210ENST00000412342 C22orf39Q6P5X5 142 aa13.45□□□□□ -0.26
HDAC8-210ENST00000412342 KIAA1324Q6UXG2 1013 aaKnown RBP13.45□□□□□ -0.26
HDAC8-210ENST00000412342 Q6ZVU0 165 aa13.45□□□□□ -0.26
HDAC8-210ENST00000412342 CACUL1Q86Y37 369 aa13.45□□□□□ -0.26
HDAC8-210ENST00000412342 TP53INP2Q8IXH6 220 aa13.45□□□□□ -0.26
HDAC8-210ENST00000412342 STK40Q8N2I9 435 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms