RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 COLGALT2Q8IYK4 626 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 TGS1Q96RS0 853 aaKnown RBP11.62□□□□□ -0.55
SNX13-202ENST00000409604 PAFAH2Q99487 392 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 XAB2Q9HCS7 855 aaKnown RBP11.62□□□□□ -0.55
SNX13-202ENST00000409604 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.62□□□□□ -0.55
SNX13-202ENST00000409604 DEC1Q9P2X7 70 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 ATG2BQ96BY7 2078 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 CTIFO43310 598 aaKnown RBP11.62□□□□□ -0.55
SNX13-202ENST00000409604 ATP5BP06576 529 aaKnown RBP11.62□□□□□ -0.55
SNX13-202ENST00000409604 EPHX1P07099 455 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 PCK1P35558 622 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 ACVRL1P37023 503 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 CAP1Q01518 475 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 STAT4Q14765 748 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 FBXL22Q6P050 247 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 PHF21BQ96EK2 531 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 POLR1EQ9GZS1 481 aaKnown RBP11.62□□□□□ -0.55
SNX13-202ENST00000409604 DUS2Q9NX74 493 aaKnown RBP11.62□□□□□ -0.55
SNX13-202ENST00000409604 SEPT3Q9UH03 358 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 ACSL4O60488 711 aa11.61□□□□□ -0.55
SNX13-202ENST00000409604 RNASEH1O60930 286 aaKnown RBP11.61□□□□□ -0.55
SNX13-202ENST00000409604 FDFT1P37268 417 aa11.61□□□□□ -0.55
SNX13-202ENST00000409604 PSEN1P49768 467 aa11.61□□□□□ -0.55
SNX13-202ENST00000409604 AMPD2Q01433 879 aa11.61□□□□□ -0.55
SNX13-202ENST00000409604 KBTBD12Q3ZCT8 623 aa11.61□□□□□ -0.55
SNX13-202ENST00000409604 FBXO48Q5FWF7 155 aa11.61□□□□□ -0.55
SNX13-202ENST00000409604 OLFML1Q6UWY5 402 aa11.61□□□□□ -0.55
SNX13-202ENST00000409604 STRADAQ7RTN6 431 aa11.61□□□□□ -0.55
SNX13-202ENST00000409604 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.61□□□□□ -0.55
SNX13-202ENST00000409604 CD84Q9UIB8 345 aa11.61□□□□□ -0.55
SNX13-202ENST00000409604 TTC28Q96AY4 2481 aa11.61□□□□□ -0.55
SNX13-202ENST00000409604 TRBV23OR9-2A0A075B6M9 112 aa11.61□□□□□ -0.55
SNX13-202ENST00000409604 LRPAP1P30533 357 aa11.61□□□□□ -0.55
SNX13-202ENST00000409604 ANKRD22Q5VYY1 191 aa11.61□□□□□ -0.55
SNX13-202ENST00000409604 TRIM68Q6AZZ1 485 aa11.61□□□□□ -0.55
SNX13-202ENST00000409604 SYDE1Q6ZW31 735 aaPredicted RBP11.61□□□□□ -0.55
SNX13-202ENST00000409604 C14orf80Q86SX3 495 aa11.61□□□□□ -0.55
SNX13-202ENST00000409604 ZNF598Q86UK7 904 aaKnown RBP11.61□□□□□ -0.55
SNX13-202ENST00000409604 ARID3BQ8IVW6 561 aaPredicted RBP11.61□□□□□ -0.55
SNX13-202ENST00000409604 CNOT1A5YKK6 2376 aaKnown RBP11.61□□□□□ -0.55
SNX13-202ENST00000409604 PHIPQ8WWQ0 1821 aa11.61□□□□□ -0.55
SNX13-202ENST00000409604 A0A0A0MRY4 1105 aa11.61□□□□□ -0.55
SNX13-202ENST00000409604 C1orf232A0A0U1RR37 186 aa11.61□□□□□ -0.55
SNX13-202ENST00000409604 HIDE1A8MVS5 230 aa11.61□□□□□ -0.55
SNX13-202ENST00000409604 SUPT3HB4E1H0 165 aa11.61□□□□□ -0.55
SNX13-202ENST00000409604 SUPT3HO75486 399 aa11.61□□□□□ -0.55
SNX13-202ENST00000409604 PYGBP11216 843 aa11.61□□□□□ -0.55
SNX13-202ENST00000409604 GDI1P31150 447 aa11.61□□□□□ -0.55
SNX13-202ENST00000409604 ARMC12Q5T9G4 340 aa11.61□□□□□ -0.55
SNX13-202ENST00000409604 TTC23LQ6PF05 361 aa11.61□□□□□ -0.55
SNX13-202ENST00000409604 RHBDF2Q6PJF5 856 aa11.61□□□□□ -0.55
SNX13-202ENST00000409604 C11orf96Q7Z7L8 435 aa11.61□□□□□ -0.55
SNX13-202ENST00000409604 TMEM110Q86TL2 294 aa11.61□□□□□ -0.55
SNX13-202ENST00000409604 SPATA13Q96N96 652 aa11.61□□□□□ -0.55
SNX13-202ENST00000409604 PEBP4Q96S96 227 aa11.61□□□□□ -0.55
SNX13-202ENST00000409604 CDK5RAP1Q96SZ6 601 aaKnown RBP11.61□□□□□ -0.55
SNX13-202ENST00000409604 SLC4A5Q9BY07 1137 aa11.61□□□□□ -0.55
SNX13-202ENST00000409604 LRRC40Q9H9A6 602 aa11.61□□□□□ -0.55
SNX13-202ENST00000409604 PSMC3IPQ9P2W1 217 aaPredicted RBP11.61□□□□□ -0.55
SNX13-202ENST00000409604 FMO4P31512 558 aa11.6□□□□□ -0.55
SNX13-202ENST00000409604 WNT3AP56704 352 aa11.6□□□□□ -0.55
SNX13-202ENST00000409604 ACAP1Q15027 740 aa11.6□□□□□ -0.55
SNX13-202ENST00000409604 STXBP5Q5T5C0 1151 aa11.6□□□□□ -0.55
SNX13-202ENST00000409604 LVRNQ6Q4G3 990 aa11.6□□□□□ -0.55
SNX13-202ENST00000409604 C15orf39Q6ZRI6 1047 aa11.6□□□□□ -0.55
SNX13-202ENST00000409604 TRMT10CQ7L0Y3 403 aaKnown RBP11.6□□□□□ -0.55
SNX13-202ENST00000409604 SORCS1Q8WY21 1168 aa11.6□□□□□ -0.55
SNX13-202ENST00000409604 OMDQ99983 421 aa11.6□□□□□ -0.55
SNX13-202ENST00000409604 TACO1Q9BSH4 297 aaKnown RBP11.6□□□□□ -0.55
SNX13-202ENST00000409604 FUT8Q9BYC5 575 aa11.6□□□□□ -0.55
SNX13-202ENST00000409604 FBXO6Q9NRD1 293 aaPredicted RBP11.6□□□□□ -0.55
SNX13-202ENST00000409604 CD274Q9NZQ7 290 aa11.6□□□□□ -0.55
SNX13-202ENST00000409604 AGO1Q9UL18 857 aaKnown RBP11.6□□□□□ -0.55
SNX13-202ENST00000409604 ASCC3Q8N3C0 2202 aaKnown RBP11.6□□□□□ -0.55
SNX13-202ENST00000409604 LCHNA4D1U4 455 aa11.6□□□□□ -0.55
SNX13-202ENST00000409604 PDZK1P1A8MUH7 402 aa11.6□□□□□ -0.55
SNX13-202ENST00000409604 ZNF197O14709 1029 aa11.6□□□□□ -0.55
SNX13-202ENST00000409604 FSCN2O14926 492 aa11.6□□□□□ -0.55
SNX13-202ENST00000409604 PTPN7P35236 360 aa11.6□□□□□ -0.55
SNX13-202ENST00000409604 SPRP35270 261 aaPredicted RBP11.6□□□□□ -0.55
SNX13-202ENST00000409604 SESN3P58005 492 aa11.6□□□□□ -0.55
SNX13-202ENST00000409604 CDH17Q12864 832 aa11.6□□□□□ -0.55
SNX13-202ENST00000409604 MPP3Q13368 585 aa11.6□□□□□ -0.55
SNX13-202ENST00000409604 KIF19Q2TAC6 998 aa11.6□□□□□ -0.55
SNX13-202ENST00000409604 SPATA16Q9BXB7 569 aa11.6□□□□□ -0.55
SNX13-202ENST00000409604 SLC39A8Q9C0K1 460 aa11.6□□□□□ -0.55
SNX13-202ENST00000409604 C12orf65Q9H3J6 166 aaKnown RBP11.6□□□□□ -0.55
SNX13-202ENST00000409604 TRIM43BA6NCK2 446 aa11.6□□□□□ -0.55
SNX13-202ENST00000409604 J3KR12 359 aa11.6□□□□□ -0.55
SNX13-202ENST00000409604 GRM6O15303 877 aa11.6□□□□□ -0.55
SNX13-202ENST00000409604 TGM5O43548 720 aa11.6□□□□□ -0.55
SNX13-202ENST00000409604 SNRPAP09012 282 aaKnown RBP11.6□□□□□ -0.55
SNX13-202ENST00000409604 ATXN3P54252 364 aaPredicted RBP11.6□□□□□ -0.55
SNX13-202ENST00000409604 GAD2Q05329 585 aa11.6□□□□□ -0.55
SNX13-202ENST00000409604 EFTUD2Q15029 972 aaKnown RBP eCLIP11.6□□□□□ -0.55
SNX13-202ENST00000409604 DCAF12L1Q5VU92 463 aa11.6□□□□□ -0.55
SNX13-202ENST00000409604 N4BP2L2Q92802 583 aaPredicted RBP11.6□□□□□ -0.55
SNX13-202ENST00000409604 TRIM43Q96BQ3 446 aaPredicted RBP11.6□□□□□ -0.55
SNX13-202ENST00000409604 ZNF670Q9BS34 389 aa11.6□□□□□ -0.55
SNX13-202ENST00000409604 WRAP53Q9BUR4 548 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms