RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 GFRA2O00451 464 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 KRIT1O00522 736 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 TJP3O95049 919 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 LATS1O95835 1130 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 CYP17A1P05093 508 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 TCF3P15923 654 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 RHOQP17081 205 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 PSMC3P17980 439 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 OR1E1P30953 314 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 CHKAP35790 457 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 ACVRL1P37023 503 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 PAFAH1B1P43034 410 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 KCNJ1P48048 391 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 SOX9P48436 509 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 HCAR3P49019 387 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 OTUD4Q01804 1114 aaKnown RBP8.56□□□□□ -1.04
GPC3-203ENST00000406757 NRG1Q02297 640 aaPredicted RBP8.56□□□□□ -1.04
GPC3-203ENST00000406757 KLF1Q13351 362 aaPredicted RBP8.56□□□□□ -1.04
GPC3-203ENST00000406757 ZNF177Q13360 481 aaPredicted RBP8.56□□□□□ -1.04
GPC3-203ENST00000406757 TFDP2Q14188 446 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 DHCR24Q15392 516 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 C5orf22Q49AR2 442 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 MPPE1Q53F39 396 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 RABGAP1LQ5R372 815 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 FYB2Q5VWT5 728 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 NAIF1Q69YI7 327 aaPredicted RBP8.56□□□□□ -1.04
GPC3-203ENST00000406757 SLC9A4Q6AI14 798 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 TMCO3Q6UWJ1 677 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 BBS12Q6ZW61 710 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 PRUNE1Q86TP1 453 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 ZC3H18Q86VM9 953 aaKnown RBP8.56□□□□□ -1.04
GPC3-203ENST00000406757 ZNF354CQ86Y25 554 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 KLHL7Q8IXQ5 586 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 FAM217AQ8IXS0 508 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 CPXM2Q8N436 756 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 PRELID2Q8N945 189 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 HJURPQ8NCD3 748 aaPredicted RBP8.56□□□□□ -1.04
GPC3-203ENST00000406757 ANKK1Q8NFD2 765 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 OR7D4Q8NG98 312 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 ACTL9Q8TC94 416 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 FAM3CQ92520 227 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 DNASE1L2Q92874 299 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 CNTNAP3BQ96NU0 1288 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 FAM83CQ9BQN1 747 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 SPON2Q9BUD6 331 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 BBS2Q9BXC9 721 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 CNTNAP3Q9BZ76 1288 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 NOL6Q9H6R4 1146 aaKnown RBP8.56□□□□□ -1.04
GPC3-203ENST00000406757 CATSPERBQ9H7T0 1116 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 HPS4Q9NQG7 708 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 SPHK2Q9NRA0 654 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 THG1LQ9NWX6 298 aaKnown RBP8.56□□□□□ -1.04
GPC3-203ENST00000406757 GTSE1Q9NYZ3 720 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 RCOR3Q9P2K3 495 aaPredicted RBP8.56□□□□□ -1.04
GPC3-203ENST00000406757 TBC1D14Q9P2M4 693 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 PPARGC1AQ9UBK2 798 aaKnown RBP8.56□□□□□ -1.04
GPC3-203ENST00000406757 ZNF212Q9UDV6 495 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 ACTL7AQ9Y615 435 aa8.56□□□□□ -1.04
GPC3-203ENST00000406757 A0A0D9SEW6 157 aa8.55□□□□□ -1.04
GPC3-203ENST00000406757 ANTXRLA6NF34 631 aa8.55□□□□□ -1.04
GPC3-203ENST00000406757 H7C0C1 242 aa8.55□□□□□ -1.04
GPC3-203ENST00000406757 CES2O00748 559 aa8.55□□□□□ -1.04
GPC3-203ENST00000406757 MAN2B1O00754 1011 aa8.55□□□□□ -1.04
GPC3-203ENST00000406757 SLC9A3R1O14745 358 aaPredicted RBP8.55□□□□□ -1.04
GPC3-203ENST00000406757 LUC7L3O95232 432 aaKnown RBP8.55□□□□□ -1.04
GPC3-203ENST00000406757 CYBBP04839 570 aa8.55□□□□□ -1.04
GPC3-203ENST00000406757 RHOCP08134 193 aa8.55□□□□□ -1.04
GPC3-203ENST00000406757 TYRP14679 529 aa8.55□□□□□ -1.04
GPC3-203ENST00000406757 TGM1P22735 817 aa8.55□□□□□ -1.04
GPC3-203ENST00000406757 GLDCP23378 1020 aa8.55□□□□□ -1.04
GPC3-203ENST00000406757 HOXD9P28356 352 aaPredicted RBP8.55□□□□□ -1.04
GPC3-203ENST00000406757 MZF1P28698 734 aaPredicted RBP8.55□□□□□ -1.04
GPC3-203ENST00000406757 HOXC13P31276 330 aa8.55□□□□□ -1.04
GPC3-203ENST00000406757 PTPN7P35236 360 aa8.55□□□□□ -1.04
GPC3-203ENST00000406757 ATP5OP48047 213 aa8.55□□□□□ -1.04
GPC3-203ENST00000406757 PAPOLAP51003 745 aaKnown RBP8.55□□□□□ -1.04
GPC3-203ENST00000406757 NRLP54845 237 aa8.55□□□□□ -1.04
GPC3-203ENST00000406757 CDH4P55283 916 aa8.55□□□□□ -1.04
GPC3-203ENST00000406757 EIF3EP60228 445 aaKnown RBP8.55□□□□□ -1.04
GPC3-203ENST00000406757 PAFAH1B3Q15102 231 aaKnown RBP8.55□□□□□ -1.04
GPC3-203ENST00000406757 PROX2Q3B8N5 592 aa8.55□□□□□ -1.04
GPC3-203ENST00000406757 RNF219Q5W0B1 726 aaPredicted RBP8.55□□□□□ -1.04
GPC3-203ENST00000406757 TTC27Q6P3X3 843 aa8.55□□□□□ -1.04
GPC3-203ENST00000406757 C12orf40Q86WS4 652 aa8.55□□□□□ -1.04
GPC3-203ENST00000406757 MFN1Q8IWA4 741 aa8.55□□□□□ -1.04
GPC3-203ENST00000406757 ARHGAP12Q8IWW6 846 aa8.55□□□□□ -1.04
GPC3-203ENST00000406757 APCDD1Q8J025 514 aa8.55□□□□□ -1.04
GPC3-203ENST00000406757 GPR161Q8N6U8 529 aaKnown RBP8.55□□□□□ -1.04
GPC3-203ENST00000406757 RTL3Q8N8U3 475 aaKnown RBP8.55□□□□□ -1.04
GPC3-203ENST00000406757 P3H4Q92791 437 aa8.55□□□□□ -1.04
GPC3-203ENST00000406757 MAGOHBQ96A72 148 aaKnown RBP8.55□□□□□ -1.04
GPC3-203ENST00000406757 LGMNQ99538 433 aa8.55□□□□□ -1.04
GPC3-203ENST00000406757 DDX47Q9H0S4 455 aaKnown RBP8.55□□□□□ -1.04
GPC3-203ENST00000406757 CHRDQ9H2X0 955 aa8.55□□□□□ -1.04
GPC3-203ENST00000406757 ECT2Q9H8V3 914 aa8.55□□□□□ -1.04
GPC3-203ENST00000406757 LMAN1LQ9HAT1 526 aa8.55□□□□□ -1.04
GPC3-203ENST00000406757 PARD6AQ9NPB6 346 aa8.55□□□□□ -1.04
GPC3-203ENST00000406757 RBM12Q9NTZ6 932 aaKnown RBP8.55□□□□□ -1.04
GPC3-203ENST00000406757 TMEM51Q9NW97 253 aa8.55□□□□□ -1.04
GPC3-203ENST00000406757 TMEM248Q9NWD8 314 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms