RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 MYOFQ9NZM1 2061 aa14.35□□□□□ -0.11
PRAME-205ENST00000405655 PRPF4O43172 522 aaKnown RBP eCLIP14.34□□□□□ -0.11
PRAME-205ENST00000405655 COCHO43405 550 aa14.34□□□□□ -0.11
PRAME-205ENST00000405655 RTN3O95197 1032 aaPredicted RBP14.34□□□□□ -0.11
PRAME-205ENST00000405655 ZDHHC11BP0C7U3 371 aa14.34□□□□□ -0.11
PRAME-205ENST00000405655 ITKQ08881 620 aa14.34□□□□□ -0.11
PRAME-205ENST00000405655 ELAVL2Q12926 359 aaKnown RBP14.34□□□□□ -0.11
PRAME-205ENST00000405655 POU6F1Q14863 301 aa14.34□□□□□ -0.11
PRAME-205ENST00000405655 AFMIDQ63HM1 303 aa14.34□□□□□ -0.11
PRAME-205ENST00000405655 C16orf46Q6P387 395 aa14.34□□□□□ -0.11
PRAME-205ENST00000405655 C6orf89Q6UWU4 347 aa14.34□□□□□ -0.11
PRAME-205ENST00000405655 C4orf22Q6V702 233 aa14.34□□□□□ -0.11
PRAME-205ENST00000405655 PIGWQ7Z7B1 504 aa14.34□□□□□ -0.11
PRAME-205ENST00000405655 LGI2Q8N0V4 545 aa14.34□□□□□ -0.11
PRAME-205ENST00000405655 SLC39A11Q8N1S5 342 aa14.34□□□□□ -0.11
PRAME-205ENST00000405655 SLC25A41Q8N5S1 370 aa14.34□□□□□ -0.11
PRAME-205ENST00000405655 CCDC134Q9H6E4 229 aa14.34□□□□□ -0.11
PRAME-205ENST00000405655 CASS4Q9NQ75 786 aa14.34□□□□□ -0.11
PRAME-205ENST00000405655 PCMTD2Q9NV79 361 aa14.34□□□□□ -0.11
PRAME-205ENST00000405655 ZNF212Q9UDV6 495 aa14.34□□□□□ -0.11
PRAME-205ENST00000405655 SLC2A6Q9UGQ3 507 aa14.34□□□□□ -0.11
PRAME-205ENST00000405655 ACTL7BQ9Y614 415 aa14.34□□□□□ -0.11
PRAME-205ENST00000405655 NCAM2O15394 837 aa14.34□□□□□ -0.11
PRAME-205ENST00000405655 LPXNO60711 386 aa14.34□□□□□ -0.11
PRAME-205ENST00000405655 CCNCP24863 283 aa14.34□□□□□ -0.11
PRAME-205ENST00000405655 OVGP1Q12889 678 aa14.34□□□□□ -0.11
PRAME-205ENST00000405655 HSP90AA5PQ58FG0 334 aa14.34□□□□□ -0.11
PRAME-205ENST00000405655 HHATQ5VTY9 493 aa14.34□□□□□ -0.11
PRAME-205ENST00000405655 STEAP4Q687X5 459 aa14.34□□□□□ -0.11
PRAME-205ENST00000405655 RNF135Q8IUD6 432 aa14.34□□□□□ -0.11
PRAME-205ENST00000405655 PGBD5Q8N414 524 aa14.34□□□□□ -0.11
PRAME-205ENST00000405655 ZNF276Q8N554 614 aa14.34□□□□□ -0.11
PRAME-205ENST00000405655 TRIM62Q9BVG3 475 aa14.34□□□□□ -0.11
PRAME-205ENST00000405655 C11orf49Q9H6J7 331 aa14.34□□□□□ -0.11
PRAME-205ENST00000405655 RC3H2Q9HBD1 1191 aaKnown RBP14.34□□□□□ -0.11
PRAME-205ENST00000405655 GLOD4Q9HC38 313 aa14.34□□□□□ -0.11
PRAME-205ENST00000405655 ZNF334Q9HCZ1 680 aaPredicted RBP14.34□□□□□ -0.11
PRAME-205ENST00000405655 EIF2B3Q9NR50 452 aaKnown RBP14.34□□□□□ -0.11
PRAME-205ENST00000405655 CLIC5Q9NZA1 410 aa14.34□□□□□ -0.11
PRAME-205ENST00000405655 CXXC1Q9P0U4 656 aaPredicted RBP14.34□□□□□ -0.11
PRAME-205ENST00000405655 CEP290O15078 2479 aa14.34□□□□□ -0.11
PRAME-205ENST00000405655 ZNF840PA6NDX5 716 aa14.33□□□□□ -0.11
PRAME-205ENST00000405655 CCL22O00626 93 aa14.33□□□□□ -0.11
PRAME-205ENST00000405655 MUSKO15146 869 aa14.33□□□□□ -0.11
PRAME-205ENST00000405655 MATN3O15232 486 aa14.33□□□□□ -0.11
PRAME-205ENST00000405655 GJA1P17302 382 aa14.33□□□□□ -0.11
PRAME-205ENST00000405655 PGAM1P18669 254 aa14.33□□□□□ -0.11
PRAME-205ENST00000405655 SARNPP82979 210 aaKnown RBP14.33□□□□□ -0.11
PRAME-205ENST00000405655 ZXDBP98169 803 aa14.33□□□□□ -0.11
PRAME-205ENST00000405655 DSC2Q02487 901 aa14.33□□□□□ -0.11
PRAME-205ENST00000405655 NIPAL4Q0D2K0 466 aa14.33□□□□□ -0.11
PRAME-205ENST00000405655 TWF1Q12792 350 aa14.33□□□□□ -0.11
PRAME-205ENST00000405655 FAM133BQ5BKY9 247 aaKnown RBP14.33□□□□□ -0.11
PRAME-205ENST00000405655 GKAP1Q5VSY0 366 aaPredicted RBP14.33□□□□□ -0.11
PRAME-205ENST00000405655 TTC39BQ5VTQ0 682 aaPredicted RBP14.33□□□□□ -0.11
PRAME-205ENST00000405655 RASSF3Q86WH2 238 aa14.33□□□□□ -0.11
PRAME-205ENST00000405655 CACNA2D3Q8IZS8 1091 aa14.33□□□□□ -0.11
PRAME-205ENST00000405655 TTC17Q96AE7 1141 aa14.33□□□□□ -0.11
PRAME-205ENST00000405655 TMEM169Q96HH4 297 aa14.33□□□□□ -0.11
PRAME-205ENST00000405655 BTN2A3PQ96KV6 586 aa14.33□□□□□ -0.11
PRAME-205ENST00000405655 MAGEB18Q96M61 343 aa14.33□□□□□ -0.11
PRAME-205ENST00000405655 NSMCE3Q96MG7 304 aa14.33□□□□□ -0.11
PRAME-205ENST00000405655 SMIM14Q96QK8 99 aa14.33□□□□□ -0.11
PRAME-205ENST00000405655 IL12RB2Q99665 862 aa14.33□□□□□ -0.11
PRAME-205ENST00000405655 ZYG11BQ9C0D3 744 aa14.33□□□□□ -0.11
PRAME-205ENST00000405655 NACA2Q9H009 215 aa14.33□□□□□ -0.11
PRAME-205ENST00000405655 CAB39LQ9H9S4 337 aa14.33□□□□□ -0.11
PRAME-205ENST00000405655 ABCF3Q9NUQ8 709 aa14.33□□□□□ -0.11
PRAME-205ENST00000405655 ZNF358Q9NW07 568 aa14.33□□□□□ -0.11
PRAME-205ENST00000405655 PLXNA4Q9HCM2 1894 aa14.33□□□□□ -0.12
PRAME-205ENST00000405655 IQANK1A0A1B0GTG1 560 aa14.33□□□□□ -0.12
PRAME-205ENST00000405655 ZCWPW2A0A1B0GU75 182 aa14.33□□□□□ -0.12
PRAME-205ENST00000405655 CCDC195A0A1B0GUA6 201 aa14.33□□□□□ -0.12
PRAME-205ENST00000405655 ZBBXA8MT70 800 aa14.33□□□□□ -0.12
PRAME-205ENST00000405655 FGF10O15520 208 aaPredicted RBP14.33□□□□□ -0.12
PRAME-205ENST00000405655 SUN1O94901 812 aa14.33□□□□□ -0.12
PRAME-205ENST00000405655 IGLV3-27P01718 113 aa14.33□□□□□ -0.12
PRAME-205ENST00000405655 SOD2P04179 222 aa14.33□□□□□ -0.12
PRAME-205ENST00000405655 PRKCGP05129 697 aa14.33□□□□□ -0.12
PRAME-205ENST00000405655 BMP1P13497 986 aa14.33□□□□□ -0.12
PRAME-205ENST00000405655 RAG1P15918 1043 aa14.33□□□□□ -0.12
PRAME-205ENST00000405655 TSHRP16473 764 aa14.33□□□□□ -0.12
PRAME-205ENST00000405655 TACR2P21452 398 aa14.33□□□□□ -0.12
PRAME-205ENST00000405655 LBX1P52954 281 aa14.33□□□□□ -0.12
PRAME-205ENST00000405655 RPL10AP62906 217 aaKnown RBP14.33□□□□□ -0.12
PRAME-205ENST00000405655 MGAT5Q09328 741 aa14.33□□□□□ -0.12
PRAME-205ENST00000405655 NR1H3Q13133 447 aa14.33□□□□□ -0.12
PRAME-205ENST00000405655 DENND5AQ6IQ26 1287 aa14.33□□□□□ -0.12
PRAME-205ENST00000405655 CMC1Q7Z7K0 106 aa14.33□□□□□ -0.12
PRAME-205ENST00000405655 OR7D4Q8NG98 312 aa14.33□□□□□ -0.12
PRAME-205ENST00000405655 ZNF461Q8TAF7 563 aa14.33□□□□□ -0.12
PRAME-205ENST00000405655 LRRC39Q96DD0 335 aa14.33□□□□□ -0.12
PRAME-205ENST00000405655 CABS1Q96KC9 395 aa14.33□□□□□ -0.12
PRAME-205ENST00000405655 C1orf74Q96LT6 269 aa14.33□□□□□ -0.12
PRAME-205ENST00000405655 ZNF558Q96NG5 402 aa14.33□□□□□ -0.12
PRAME-205ENST00000405655 TSGA13Q96PP4 275 aa14.33□□□□□ -0.12
PRAME-205ENST00000405655 FERMT1Q9BQL6 677 aa14.33□□□□□ -0.12
PRAME-205ENST00000405655 FRMD8Q9BZ67 464 aaPredicted RBP14.33□□□□□ -0.12
PRAME-205ENST00000405655 PRDM16Q9HAZ2 1276 aa14.33□□□□□ -0.12
PRAME-205ENST00000405655 FETUBQ9UGM5 382 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms