RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 NRAPQ86VF7 1730 aa6.98□□□□□ -1.29
SMCO1-201ENST00000397537 LMTK2Q8IWU2 1503 aa6.98□□□□□ -1.29
SMCO1-201ENST00000397537 A0A1W2PQM1 296 aa6.98□□□□□ -1.29
SMCO1-201ENST00000397537 FAM170BA6NMN3 283 aa6.98□□□□□ -1.29
SMCO1-201ENST00000397537 A8MZ25 164 aa6.98□□□□□ -1.29
SMCO1-201ENST00000397537 ACOT7O00154 380 aa6.98□□□□□ -1.29
SMCO1-201ENST00000397537 O00370 1275 aa6.98□□□□□ -1.29
SMCO1-201ENST00000397537 SPAG6O75602 509 aa6.98□□□□□ -1.29
SMCO1-201ENST00000397537 RGS9O75916 674 aaPredicted RBP6.98□□□□□ -1.29
SMCO1-201ENST00000397537 DNAJB5O75953 348 aa6.98□□□□□ -1.29
SMCO1-201ENST00000397537 RECQL4O94761 1208 aa6.98□□□□□ -1.29
SMCO1-201ENST00000397537 SEC24DO94855 1032 aaPredicted RBP6.98□□□□□ -1.29
SMCO1-201ENST00000397537 PENKP01210 267 aaPredicted RBP6.98□□□□□ -1.29
SMCO1-201ENST00000397537 GNAI2P04899 355 aa6.98□□□□□ -1.29
SMCO1-201ENST00000397537 FYNP06241 537 aa6.98□□□□□ -1.29
SMCO1-201ENST00000397537 ACTN1P12814 892 aa6.98□□□□□ -1.29
SMCO1-201ENST00000397537 ZFXP17010 805 aaPredicted RBP6.98□□□□□ -1.29
SMCO1-201ENST00000397537 SMPD1P17405 629 aa6.98□□□□□ -1.29
SMCO1-201ENST00000397537 CDH2P19022 906 aaPredicted RBP6.98□□□□□ -1.29
SMCO1-201ENST00000397537 SREBF1P36956 1147 aa6.98□□□□□ -1.29
SMCO1-201ENST00000397537 STAT2P52630 851 aa6.98□□□□□ -1.29
SMCO1-201ENST00000397537 EPHB3P54753 998 aa6.98□□□□□ -1.29
SMCO1-201ENST00000397537 UCP3P55916 312 aa6.98□□□□□ -1.29
SMCO1-201ENST00000397537 ACY1Q03154 408 aa6.98□□□□□ -1.29
SMCO1-201ENST00000397537 PKN1Q16512 942 aa6.98□□□□□ -1.29
SMCO1-201ENST00000397537 INSCQ1MX18 579 aa6.98□□□□□ -1.29
SMCO1-201ENST00000397537 CCDC57Q2TAC2 916 aa6.98□□□□□ -1.29
SMCO1-201ENST00000397537 TWISTNBQ3B726 338 aaPredicted RBP6.98□□□□□ -1.29
SMCO1-201ENST00000397537 CCDC122Q5T0U0 273 aa6.98□□□□□ -1.29
SMCO1-201ENST00000397537 AADACL4Q5VUY2 407 aa6.98□□□□□ -1.29
SMCO1-201ENST00000397537 TNIP2Q8NFZ5 429 aa6.98□□□□□ -1.29
SMCO1-201ENST00000397537 OR52M1Q8NGK5 317 aa6.98□□□□□ -1.29
SMCO1-201ENST00000397537 ST7LQ8TDW4 575 aa6.98□□□□□ -1.29
SMCO1-201ENST00000397537 HMGB4Q8WW32 186 aa6.98□□□□□ -1.29
SMCO1-201ENST00000397537 WASF1Q92558 559 aa6.98□□□□□ -1.29
SMCO1-201ENST00000397537 ZBTB9Q96C00 473 aa6.98□□□□□ -1.29
SMCO1-201ENST00000397537 SAT2Q96F10 170 aaPredicted RBP6.98□□□□□ -1.29
SMCO1-201ENST00000397537 EDC3Q96F86 508 aaKnown RBP6.98□□□□□ -1.29
SMCO1-201ENST00000397537 CCDC106Q9BWC9 280 aa6.98□□□□□ -1.29
SMCO1-201ENST00000397537 TMPRSS13Q9BYE2 586 aa6.98□□□□□ -1.29
SMCO1-201ENST00000397537 TRIM31Q9BZY9 425 aa6.98□□□□□ -1.29
SMCO1-201ENST00000397537 SH2D4AQ9H788 454 aa6.98□□□□□ -1.29
SMCO1-201ENST00000397537 GALNT8Q9NY28 637 aa6.98□□□□□ -1.29
SMCO1-201ENST00000397537 WSB2Q9NYS7 404 aaPredicted RBP6.98□□□□□ -1.29
SMCO1-201ENST00000397537 GULP1Q9UBP9 304 aa6.98□□□□□ -1.29
SMCO1-201ENST00000397537 ARMCX3Q9UH62 379 aaPredicted RBP6.98□□□□□ -1.29
SMCO1-201ENST00000397537 OSGIN1Q9UJX0 560 aa6.98□□□□□ -1.29
SMCO1-201ENST00000397537 PLAGL2Q9UPG8 496 aa6.98□□□□□ -1.29
SMCO1-201ENST00000397537 SPATA31A5Q5VU36 1347 aa6.98□□□□□ -1.29
SMCO1-201ENST00000397537 MROH5Q6ZUA9 1318 aa6.98□□□□□ -1.29
SMCO1-201ENST00000397537 SPATA31A7Q8IWB4 1347 aa6.98□□□□□ -1.29
SMCO1-201ENST00000397537 BRD4O60885 1362 aaPredicted RBP6.98□□□□□ -1.29
SMCO1-201ENST00000397537 PCNTO95613 3336 aa6.97□□□□□ -1.29
SMCO1-201ENST00000397537 SLC9B1P1A6NJY1 282 aa6.97□□□□□ -1.29
SMCO1-201ENST00000397537 FAM90A7PA6NKC0 464 aa6.97□□□□□ -1.29
SMCO1-201ENST00000397537 FAM90A22PA8MWA6 464 aa6.97□□□□□ -1.29
SMCO1-201ENST00000397537 FAM90A12PA8MX19 464 aa6.97□□□□□ -1.29
SMCO1-201ENST00000397537 FAM90A23PA8MXZ1 464 aa6.97□□□□□ -1.29
SMCO1-201ENST00000397537 HNRNPCL2B2RXH8 293 aa6.97□□□□□ -1.29
SMCO1-201ENST00000397537 H7C4K7 107 aa6.97□□□□□ -1.29
SMCO1-201ENST00000397537 SLCO2B1O94956 709 aa6.97□□□□□ -1.29
SMCO1-201ENST00000397537 PLGP00747 810 aaPredicted RBP6.97□□□□□ -1.29
SMCO1-201ENST00000397537 GABRB1P18505 474 aa6.97□□□□□ -1.29
SMCO1-201ENST00000397537 CDH3P22223 829 aa6.97□□□□□ -1.29
SMCO1-201ENST00000397537 PRKCHP24723 683 aa6.97□□□□□ -1.29
SMCO1-201ENST00000397537 DNAJB1P25685 340 aa6.97□□□□□ -1.29
SMCO1-201ENST00000397537 TTKP33981 857 aa6.97□□□□□ -1.29
SMCO1-201ENST00000397537 GCLCP48506 637 aaPredicted RBP6.97□□□□□ -1.29
SMCO1-201ENST00000397537 NOMO3P69849 1222 aa6.97□□□□□ -1.29
SMCO1-201ENST00000397537 CYP4F8P98187 520 aa6.97□□□□□ -1.29
SMCO1-201ENST00000397537 TRAF1Q13077 416 aa6.97□□□□□ -1.29
SMCO1-201ENST00000397537 FRG1Q14331 258 aaKnown RBP6.97□□□□□ -1.29
SMCO1-201ENST00000397537 NEDD9Q14511 834 aa6.97□□□□□ -1.29
SMCO1-201ENST00000397537 IL11RAQ14626 422 aa6.97□□□□□ -1.29
SMCO1-201ENST00000397537 PREPLQ4J6C6 727 aaPredicted RBP6.97□□□□□ -1.29
SMCO1-201ENST00000397537 CCDC178Q5BJE1 867 aa6.97□□□□□ -1.29
SMCO1-201ENST00000397537 CLEC2AQ6UVW9 174 aa6.97□□□□□ -1.29
SMCO1-201ENST00000397537 MFSD7Q6UXD7 560 aa6.97□□□□□ -1.29
SMCO1-201ENST00000397537 WFDC3Q8IUB2 231 aa6.97□□□□□ -1.29
SMCO1-201ENST00000397537 FAM133AQ8N9E0 248 aa6.97□□□□□ -1.29
SMCO1-201ENST00000397537 XXYLT1Q8NBI6 393 aa6.97□□□□□ -1.29
SMCO1-201ENST00000397537 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.97□□□□□ -1.29
SMCO1-201ENST00000397537 RAPGEF4Q8WZA2 1011 aa6.97□□□□□ -1.29
SMCO1-201ENST00000397537 INTS12Q96CB8 462 aaKnown RBP6.97□□□□□ -1.29
SMCO1-201ENST00000397537 TOE1Q96GM8 510 aaKnown RBP6.97□□□□□ -1.29
SMCO1-201ENST00000397537 LINC00615Q96LM1 132 aaPredicted RBP6.97□□□□□ -1.29
SMCO1-201ENST00000397537 MDFIQ99750 246 aa6.97□□□□□ -1.29
SMCO1-201ENST00000397537 CPEB1Q9BZB8 566 aaKnown RBP6.97□□□□□ -1.29
SMCO1-201ENST00000397537 PUS3Q9BZE2 481 aaKnown RBP6.97□□□□□ -1.29
SMCO1-201ENST00000397537 TTC12Q9H892 705 aaPredicted RBP6.97□□□□□ -1.29
SMCO1-201ENST00000397537 COQ10BQ9H8M1 238 aa6.97□□□□□ -1.29
SMCO1-201ENST00000397537 POLR1BQ9H9Y6 1135 aa6.97□□□□□ -1.29
SMCO1-201ENST00000397537 ZBTB26Q9HCK0 441 aa6.97□□□□□ -1.29
SMCO1-201ENST00000397537 TLR8Q9NR97 1041 aaKnown RBP6.97□□□□□ -1.29
SMCO1-201ENST00000397537 FAM105AQ9NUU6 356 aa6.97□□□□□ -1.29
SMCO1-201ENST00000397537 BTBD7Q9P203 1132 aa6.97□□□□□ -1.29
SMCO1-201ENST00000397537 DKK4Q9UBT3 224 aa6.97□□□□□ -1.29
SMCO1-201ENST00000397537 RIMKLBQ9ULI2 386 aa6.97□□□□□ -1.29
SMCO1-201ENST00000397537 PPIEQ9UNP9 301 aaKnown RBP6.97□□□□□ -1.29
SMCO1-201ENST00000397537 RCE1Q9Y256 329 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms