RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 TRAPPC12Q8WVT3 735 aa10.02□□□□□ -0.8
TRIM39-203ENST00000396547 SREK1Q8WXA9 508 aaKnown RBP10.02□□□□□ -0.8
TRIM39-203ENST00000396547 DEFB129Q9H1M3 183 aa10.02□□□□□ -0.8
TRIM39-203ENST00000396547 EFCAB1Q9HAE3 211 aa10.02□□□□□ -0.8
TRIM39-203ENST00000396547 TMPRSS4Q9NRS4 437 aa10.02□□□□□ -0.8
TRIM39-203ENST00000396547 GTSE1Q9NYZ3 720 aa10.02□□□□□ -0.8
TRIM39-203ENST00000396547 UBP1Q9NZI7 540 aa10.02□□□□□ -0.8
TRIM39-203ENST00000396547 ZDHHC2Q9UIJ5 367 aa10.02□□□□□ -0.8
TRIM39-203ENST00000396547 TSPAN16Q9UKR8 245 aa10.02□□□□□ -0.8
TRIM39-203ENST00000396547 ZNF232Q9UNY5 417 aa10.02□□□□□ -0.8
TRIM39-203ENST00000396547 PCDHB12Q9Y5F1 795 aa10.02□□□□□ -0.8
TRIM39-203ENST00000396547 J3QRK9 145 aa10.02□□□□□ -0.81
TRIM39-203ENST00000396547 CELF2O95319 508 aaKnown RBP10.02□□□□□ -0.81
TRIM39-203ENST00000396547 MYL4P12829 197 aa10.02□□□□□ -0.81
TRIM39-203ENST00000396547 UGT1A6P19224 532 aa10.02□□□□□ -0.81
TRIM39-203ENST00000396547 TFEBP19484 476 aa10.02□□□□□ -0.81
TRIM39-203ENST00000396547 VARSP26640 1264 aaKnown RBP10.02□□□□□ -0.81
TRIM39-203ENST00000396547 CDH5P33151 784 aaPredicted RBP10.02□□□□□ -0.81
TRIM39-203ENST00000396547 GPD2P43304 727 aa10.02□□□□□ -0.81
TRIM39-203ENST00000396547 GRIA4P48058 902 aa10.02□□□□□ -0.81
TRIM39-203ENST00000396547 HARS2P49590 506 aaKnown RBP10.02□□□□□ -0.81
TRIM39-203ENST00000396547 ESRRGP62508 458 aa10.02□□□□□ -0.81
TRIM39-203ENST00000396547 CDK18Q07002 472 aa10.02□□□□□ -0.81
TRIM39-203ENST00000396547 BOLA3Q53S33 107 aa10.02□□□□□ -0.81
TRIM39-203ENST00000396547 PIGGQ5H8A4 983 aa10.02□□□□□ -0.81
TRIM39-203ENST00000396547 GPR107Q5VW38 600 aa10.02□□□□□ -0.81
TRIM39-203ENST00000396547 C16orf87Q6PH81 154 aa10.02□□□□□ -0.81
TRIM39-203ENST00000396547 ZBTB49Q6ZSB9 765 aa10.02□□□□□ -0.81
TRIM39-203ENST00000396547 RPS27LQ71UM5 84 aaKnown RBP10.02□□□□□ -0.81
TRIM39-203ENST00000396547 CHST15Q7LFX5 561 aaPredicted RBP10.02□□□□□ -0.81
TRIM39-203ENST00000396547 GPR141Q7Z602 305 aa10.02□□□□□ -0.81
TRIM39-203ENST00000396547 ERI1Q8IV48 349 aaKnown RBP10.02□□□□□ -0.81
TRIM39-203ENST00000396547 TP53INP2Q8IXH6 220 aa10.02□□□□□ -0.81
TRIM39-203ENST00000396547 NSUN6Q8TEA1 469 aaKnown RBP10.02□□□□□ -0.81
TRIM39-203ENST00000396547 CLEC4CQ8WTT0 213 aa10.02□□□□□ -0.81
TRIM39-203ENST00000396547 LZICQ8WZA0 190 aa10.02□□□□□ -0.81
TRIM39-203ENST00000396547 FBXL8Q96CD0 374 aa10.02□□□□□ -0.81
TRIM39-203ENST00000396547 LRRC39Q96DD0 335 aa10.02□□□□□ -0.81
TRIM39-203ENST00000396547 CCDC97Q96F63 343 aaPredicted RBP10.02□□□□□ -0.81
TRIM39-203ENST00000396547 SLC39A3Q9BRY0 314 aa10.02□□□□□ -0.81
TRIM39-203ENST00000396547 FRMD8Q9BZ67 464 aaPredicted RBP10.02□□□□□ -0.81
TRIM39-203ENST00000396547 FAM96AQ9H5X1 160 aa10.02□□□□□ -0.81
TRIM39-203ENST00000396547 STN1Q9H668 368 aaKnown RBP10.02□□□□□ -0.81
TRIM39-203ENST00000396547 NMRAL1Q9HBL8 299 aa10.02□□□□□ -0.81
TRIM39-203ENST00000396547 MKS1Q9NXB0 559 aa10.02□□□□□ -0.81
TRIM39-203ENST00000396547 CCDC167Q9P0B6 97 aa10.02□□□□□ -0.81
TRIM39-203ENST00000396547 BCAP29Q9UHQ4 241 aa10.02□□□□□ -0.81
TRIM39-203ENST00000396547 MRPL42Q9Y6G3 142 aaKnown RBP10.02□□□□□ -0.81
TRIM39-203ENST00000396547 BCLAF3A2AJT9 711 aaKnown RBP10.02□□□□□ -0.81
TRIM39-203ENST00000396547 ZNF839A8K0R7 811 aa10.02□□□□□ -0.81
TRIM39-203ENST00000396547 H6PDO95479 791 aa10.02□□□□□ -0.81
TRIM39-203ENST00000396547 C2P06681 752 aa10.02□□□□□ -0.81
TRIM39-203ENST00000396547 LCP1P13796 627 aa10.02□□□□□ -0.81
TRIM39-203ENST00000396547 GOT1P17174 413 aa10.02□□□□□ -0.81
TRIM39-203ENST00000396547 TM4SF4P48230 202 aa10.02□□□□□ -0.81
TRIM39-203ENST00000396547 NDST1P52848 882 aa10.02□□□□□ -0.81
TRIM39-203ENST00000396547 AMHR2Q16671 573 aa10.02□□□□□ -0.81
TRIM39-203ENST00000396547 GLRA4Q5JXX5 417 aa10.02□□□□□ -0.81
TRIM39-203ENST00000396547 FSTL4Q6MZW2 842 aa10.02□□□□□ -0.81
TRIM39-203ENST00000396547 RGMBQ6NW40 437 aa10.02□□□□□ -0.81
TRIM39-203ENST00000396547 FAM131BQ86XD5 332 aa10.02□□□□□ -0.81
TRIM39-203ENST00000396547 RNF135Q8IUD6 432 aa10.02□□□□□ -0.81
TRIM39-203ENST00000396547 SMYD1Q8NB12 490 aa10.02□□□□□ -0.81
TRIM39-203ENST00000396547 MCUQ8NE86 351 aa10.02□□□□□ -0.81
TRIM39-203ENST00000396547 MCRS1Q96EZ8 462 aa10.02□□□□□ -0.81
TRIM39-203ENST00000396547 FCRL3Q96P31 734 aaPredicted RBP10.02□□□□□ -0.81
TRIM39-203ENST00000396547 LHX5Q9H2C1 402 aa10.02□□□□□ -0.81
TRIM39-203ENST00000396547 ADGRA2Q96PE1 1338 aa10.01□□□□□ -0.81
TRIM39-203ENST00000396547 TRIM43BA6NCK2 446 aa10.01□□□□□ -0.81
TRIM39-203ENST00000396547 KPNA7A9QM74 516 aa10.01□□□□□ -0.81
TRIM39-203ENST00000396547 NRP1O14786 923 aa10.01□□□□□ -0.81
TRIM39-203ENST00000396547 GNAO1P09471 354 aa10.01□□□□□ -0.81
TRIM39-203ENST00000396547 HOXC6P09630 235 aa10.01□□□□□ -0.81
TRIM39-203ENST00000396547 TGM2P21980 687 aa10.01□□□□□ -0.81
TRIM39-203ENST00000396547 ACAT1P24752 427 aaKnown RBP10.01□□□□□ -0.81
TRIM39-203ENST00000396547 GP5P40197 560 aa10.01□□□□□ -0.81
TRIM39-203ENST00000396547 IGBP1P78318 339 aa10.01□□□□□ -0.81
TRIM39-203ENST00000396547 SFSWAPQ12872 951 aaKnown RBP10.01□□□□□ -0.81
TRIM39-203ENST00000396547 APOFQ13790 326 aa10.01□□□□□ -0.81
TRIM39-203ENST00000396547 ZNF460Q14592 562 aa10.01□□□□□ -0.81
TRIM39-203ENST00000396547 DGKDQ16760 1214 aa10.01□□□□□ -0.81
TRIM39-203ENST00000396547 GOLGA7BQ2TAP0 167 aa10.01□□□□□ -0.81
TRIM39-203ENST00000396547 PMF1Q6P1K2 205 aa10.01□□□□□ -0.81
TRIM39-203ENST00000396547 ZFP1Q6P2D0 407 aa10.01□□□□□ -0.81
TRIM39-203ENST00000396547 TTC33Q6PID6 262 aaPredicted RBP10.01□□□□□ -0.81
TRIM39-203ENST00000396547 TIFABQ6ZNK6 161 aa10.01□□□□□ -0.81
TRIM39-203ENST00000396547 ACOT1Q86TX2 421 aa10.01□□□□□ -0.81
TRIM39-203ENST00000396547 RASAL3Q86YV0 1011 aa10.01□□□□□ -0.81
TRIM39-203ENST00000396547 HERC6Q8IVU3 1022 aa10.01□□□□□ -0.81
TRIM39-203ENST00000396547 HTR3CQ8WXA8 447 aa10.01□□□□□ -0.81
TRIM39-203ENST00000396547 NDRG1Q92597 394 aaKnown RBP10.01□□□□□ -0.81
TRIM39-203ENST00000396547 LPGAT1Q92604 370 aa10.01□□□□□ -0.81
TRIM39-203ENST00000396547 MFSD3Q96ES6 412 aa10.01□□□□□ -0.81
TRIM39-203ENST00000396547 RPF1Q9H9Y2 349 aaKnown RBP10.01□□□□□ -0.81
TRIM39-203ENST00000396547 PLGRKTQ9HBL7 147 aa10.01□□□□□ -0.81
TRIM39-203ENST00000396547 IARS2Q9NSE4 1012 aaKnown RBP10.01□□□□□ -0.81
TRIM39-203ENST00000396547 WBP1LQ9NX94 342 aa10.01□□□□□ -0.81
TRIM39-203ENST00000396547 CDYLQ9Y232 598 aa10.01□□□□□ -0.81
TRIM39-203ENST00000396547 E7ENX8 843 aa10.01□□□□□ -0.81
TRIM39-203ENST00000396547 PSMD12O00232 456 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms