RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 IFI35P80217 286 aaPredicted RBP13.99□□□□□ -0.17
VAPB-202ENST00000395802 NR1H3Q13133 447 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 RFTN1Q14699 578 aaPredicted RBP13.99□□□□□ -0.17
VAPB-202ENST00000395802 MORF4L2Q15014 288 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 ANKRD20A2Q5SQ80 823 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 ANKRD20A1Q5TYW2 823 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 ANKRD20A3Q5VUR7 823 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 PID1Q7Z2X4 250 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 METTL3Q86U44 580 aaKnown RBP13.99□□□□□ -0.17
VAPB-202ENST00000395802 HOOK3Q86VS8 718 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 CCDC33Q8N5R6 958 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 FIBINQ8TAL6 211 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 DEPDC1BQ8WUY9 529 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 ELSPBP1Q96BH3 223 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 MYEOVQ96EZ4 313 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 LRCH3Q96II8 777 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 C2orf49Q9BVC5 232 aaPredicted RBP13.99□□□□□ -0.17
VAPB-202ENST00000395802 BBS2Q9BXC9 721 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 SLC2A11Q9BYW1 496 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 FOXP3Q9BZS1 431 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 NOL6Q9H6R4 1146 aaKnown RBP13.99□□□□□ -0.17
VAPB-202ENST00000395802 ATP13A1Q9HD20 1204 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 HEPACAM2A8MVW5 462 aa13.98□□□□□ -0.17
VAPB-202ENST00000395802 DNALI1O14645 258 aaPredicted RBP13.98□□□□□ -0.17
VAPB-202ENST00000395802 SCAMP3O14828 347 aaKnown RBP13.98□□□□□ -0.17
VAPB-202ENST00000395802 KDELR3O43731 214 aa13.98□□□□□ -0.17
VAPB-202ENST00000395802 PENKP01210 267 aaPredicted RBP13.98□□□□□ -0.17
VAPB-202ENST00000395802 VAV1P15498 845 aa13.98□□□□□ -0.17
VAPB-202ENST00000395802 HOXD9P28356 352 aaPredicted RBP13.98□□□□□ -0.17
VAPB-202ENST00000395802 RPL22P35268 128 aaKnown RBP13.98□□□□□ -0.17
VAPB-202ENST00000395802 RPL21P46778 160 aaKnown RBP13.98□□□□□ -0.17
VAPB-202ENST00000395802 VPS41P49754 854 aa13.98□□□□□ -0.17
VAPB-202ENST00000395802 SARNPP82979 210 aaKnown RBP13.98□□□□□ -0.17
VAPB-202ENST00000395802 GAD2Q05329 585 aa13.98□□□□□ -0.17
VAPB-202ENST00000395802 PARP6Q2NL67 630 aa13.98□□□□□ -0.17
VAPB-202ENST00000395802 MARC1Q5VT66 337 aa13.98□□□□□ -0.17
VAPB-202ENST00000395802 FYB2Q5VWT5 728 aa13.98□□□□□ -0.17
VAPB-202ENST00000395802 RNF43Q68DV7 783 aa13.98□□□□□ -0.17
VAPB-202ENST00000395802 EMBQ6PCB8 327 aa13.98□□□□□ -0.17
VAPB-202ENST00000395802 PPP1R21Q6ZMI0 780 aa13.98□□□□□ -0.17
VAPB-202ENST00000395802 MFSD6LQ8IWD5 586 aa13.98□□□□□ -0.17
VAPB-202ENST00000395802 PPIL6Q8IXY8 311 aa13.98□□□□□ -0.17
VAPB-202ENST00000395802 ACDQ96AP0 544 aa13.98□□□□□ -0.17
VAPB-202ENST00000395802 XPO6Q96QU8 1125 aaKnown RBP13.98□□□□□ -0.17
VAPB-202ENST00000395802 FRMD8Q9BZ67 464 aaPredicted RBP13.98□□□□□ -0.17
VAPB-202ENST00000395802 C10orf88Q9H8K7 445 aa13.98□□□□□ -0.17
VAPB-202ENST00000395802 ANAPC5Q9UJX4 755 aa13.98□□□□□ -0.17
VAPB-202ENST00000395802 E7EVH7 732 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 NEDD8-MDP1E9PL57 170 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 KCNK1O00180 336 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 ZSCAN5DPP0CG00 497 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 PSMC3P17980 439 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 PTPN3P26045 913 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 VIPR2P41587 438 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 SGSHP51688 502 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 PLTPP55058 493 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 BASP1P80723 227 aaKnown RBP13.97□□□□□ -0.17
VAPB-202ENST00000395802 FCHO2Q0JRZ9 810 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 PRPSAP1Q14558 356 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 IZUMO3Q5VZ72 239 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 RNF219Q5W0B1 726 aaPredicted RBP13.97□□□□□ -0.17
VAPB-202ENST00000395802 CXorf57Q6NSI4 855 aaKnown RBP13.97□□□□□ -0.17
VAPB-202ENST00000395802 RETSATQ6NUM9 610 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 TP53INP2Q8IXH6 220 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 MAML1Q92585 1016 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 ART4Q93070 314 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 TEKT5Q96M29 485 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 FMO2Q99518 471 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 SPON2Q9BUD6 331 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 ACE2Q9BYF1 805 aaPredicted RBP13.97□□□□□ -0.17
VAPB-202ENST00000395802 RAB6BQ9NRW1 208 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 IGSF9Q9P2J2 1179 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 VPS28Q9UK41 221 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 SHOC2Q9UQ13 582 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 WNT6Q9Y6F9 365 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 ERI2A8K979 691 aaKnown RBP13.97□□□□□ -0.17
VAPB-202ENST00000395802 CHADO15335 359 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 PRAMEF11O60813 436 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 ECI2O75521 394 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 TYRP14679 529 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 ETS1P14921 441 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 FOSL2P15408 326 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 CDK16Q00536 496 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 WASHC5Q12768 1159 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 DMC1Q14565 340 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 CASP8Q14790 479 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 SKIV2LQ15477 1246 aaKnown RBP13.97□□□□□ -0.17
VAPB-202ENST00000395802 PREPLQ4J6C6 727 aaPredicted RBP13.97□□□□□ -0.17
VAPB-202ENST00000395802 HDXQ7Z353 690 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 TMEM25Q86YD3 366 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 DCAF4L2Q8NA75 395 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 NETO2Q8NC67 525 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 CCDC110Q8TBZ0 833 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 SUSD6Q92537 303 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 CAVIN3Q969G5 261 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 EXOC4Q96A65 974 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 GDAP1L1Q96MZ0 367 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 IL12RB2Q99665 862 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 FEM1AQ9BSK4 669 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 NEUROG2Q9H2A3 272 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms