RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 TRIM10Q9UDY6 481 aa20.38■□□□□ 0.85
SNCA-203ENST00000394986 DOCK4Q8N1I0 1966 aa20.38■□□□□ 0.85
SNCA-203ENST00000394986 DCLK1O15075 740 aa20.37■□□□□ 0.85
SNCA-203ENST00000394986 HRO43593 1189 aa20.37■□□□□ 0.85
SNCA-203ENST00000394986 SIN3BO75182 1162 aa20.37■□□□□ 0.85
SNCA-203ENST00000394986 COMTP21964 271 aa20.37■□□□□ 0.85
SNCA-203ENST00000394986 AMPD1P23109 780 aa20.37■□□□□ 0.85
SNCA-203ENST00000394986 ARL4AP40617 200 aa20.37■□□□□ 0.85
SNCA-203ENST00000394986 ARSEP51690 589 aa20.37■□□□□ 0.85
SNCA-203ENST00000394986 ARF5P84085 180 aa20.37■□□□□ 0.85
SNCA-203ENST00000394986 POLD3Q15054 466 aaPredicted RBP20.37■□□□□ 0.85
SNCA-203ENST00000394986 ACCSLQ4AC99 568 aa20.37■□□□□ 0.85
SNCA-203ENST00000394986 ZC3H14Q6PJT7 736 aaKnown RBP20.37■□□□□ 0.85
SNCA-203ENST00000394986 KIAA1324Q6UXG2 1013 aaKnown RBP20.37■□□□□ 0.85
SNCA-203ENST00000394986 ZNF354CQ86Y25 554 aa20.37■□□□□ 0.85
SNCA-203ENST00000394986 LRRC8AQ8IWT6 810 aa20.37■□□□□ 0.85
SNCA-203ENST00000394986 SH2D3CQ8N5H7 860 aa20.37■□□□□ 0.85
SNCA-203ENST00000394986 NPWQ8N729 165 aa20.37■□□□□ 0.85
SNCA-203ENST00000394986 KDM1BQ8NB78 822 aa20.37■□□□□ 0.85
SNCA-203ENST00000394986 FRS2Q8WU20 508 aa20.37■□□□□ 0.85
SNCA-203ENST00000394986 RLN3Q8WXF3 142 aa20.37■□□□□ 0.85
SNCA-203ENST00000394986 TSC1Q92574 1164 aa20.37■□□□□ 0.85
SNCA-203ENST00000394986 HMCESQ96FZ2 354 aa20.37■□□□□ 0.85
SNCA-203ENST00000394986 MRGPRX1Q96LB2 322 aa20.37■□□□□ 0.85
SNCA-203ENST00000394986 KLC2Q9H0B6 622 aa20.37■□□□□ 0.85
SNCA-203ENST00000394986 MAGEH1Q9H213 219 aa20.37■□□□□ 0.85
SNCA-203ENST00000394986 ARIH1Q9Y4X5 557 aaPredicted RBP20.37■□□□□ 0.85
SNCA-203ENST00000394986 DMDP11532 3685 aa20.37■□□□□ 0.85
SNCA-203ENST00000394986 CCDC163A0A0D9SF12 145 aa20.36■□□□□ 0.85
SNCA-203ENST00000394986 RASA4BC9J798 803 aa20.36■□□□□ 0.85
SNCA-203ENST00000394986 RASA4O43374 803 aa20.36■□□□□ 0.85
SNCA-203ENST00000394986 SMAD6O43541 496 aaKnown RBP20.36■□□□□ 0.85
SNCA-203ENST00000394986 SRCP12931 536 aa20.36■□□□□ 0.85
SNCA-203ENST00000394986 NBL1P41271 181 aa20.36■□□□□ 0.85
SNCA-203ENST00000394986 HCAR3P49019 387 aa20.36■□□□□ 0.85
SNCA-203ENST00000394986 DPYSL3Q14195 570 aa20.36■□□□□ 0.85
SNCA-203ENST00000394986 ZFYVE27Q5T4F4 411 aa20.36■□□□□ 0.85
SNCA-203ENST00000394986 C9orf64Q5T6V5 341 aa20.36■□□□□ 0.85
SNCA-203ENST00000394986 TP53INP2Q8IXH6 220 aa20.36■□□□□ 0.85
SNCA-203ENST00000394986 UMODL1-AS1Q8N2C9 162 aa20.36■□□□□ 0.85
SNCA-203ENST00000394986 ATP11CQ8NB49 1132 aa20.36■□□□□ 0.85
SNCA-203ENST00000394986 OR2T3Q8NH03 318 aa20.36■□□□□ 0.85
SNCA-203ENST00000394986 TPCN2Q8NHX9 752 aa20.36■□□□□ 0.85
SNCA-203ENST00000394986 SUN2Q9UH99 717 aa20.36■□□□□ 0.85
SNCA-203ENST00000394986 HS3ST2Q9Y278 367 aa20.36■□□□□ 0.85
SNCA-203ENST00000394986 MYO15AQ9UKN7 3530 aa20.36■□□□□ 0.85
SNCA-203ENST00000394986 EDDM13A0A1B0GTR0 161 aa20.36■□□□□ 0.85
SNCA-203ENST00000394986 PJA2O43164 708 aa20.36■□□□□ 0.85
SNCA-203ENST00000394986 SPOPO43791 374 aa20.36■□□□□ 0.85
SNCA-203ENST00000394986 ATP9BO43861 1147 aa20.36■□□□□ 0.85
SNCA-203ENST00000394986 KRT7P08729 469 aa20.36■□□□□ 0.85
SNCA-203ENST00000394986 IL4RP24394 825 aa20.36■□□□□ 0.85
SNCA-203ENST00000394986 NNMTP40261 264 aa20.36■□□□□ 0.85
SNCA-203ENST00000394986 ZNF135P52742 658 aaPredicted RBP20.36■□□□□ 0.85
SNCA-203ENST00000394986 CCZ1BP86790 482 aa20.36■□□□□ 0.85
SNCA-203ENST00000394986 CCZ1P86791 482 aaPredicted RBP20.36■□□□□ 0.85
SNCA-203ENST00000394986 DLG2Q15700 870 aa20.36■□□□□ 0.85
SNCA-203ENST00000394986 Q6ZVU0 165 aa20.36■□□□□ 0.85
SNCA-203ENST00000394986 TMPRSS6Q8IU80 811 aa20.36■□□□□ 0.85
SNCA-203ENST00000394986 ARHGAP12Q8IWW6 846 aa20.36■□□□□ 0.85
SNCA-203ENST00000394986 FAM160A2Q8N612 972 aaPredicted RBP20.36■□□□□ 0.85
SNCA-203ENST00000394986 FRMD1Q8N878 549 aa20.36■□□□□ 0.85
SNCA-203ENST00000394986 CCDC112Q8NEF3 446 aa20.36■□□□□ 0.85
SNCA-203ENST00000394986 FAM71BQ8TC56 605 aa20.36■□□□□ 0.85
SNCA-203ENST00000394986 RAPGEF5Q92565 580 aa20.36■□□□□ 0.85
SNCA-203ENST00000394986 PTPRN2Q92932 1015 aa20.36■□□□□ 0.85
SNCA-203ENST00000394986 CALN1Q9BXU9 219 aa20.36■□□□□ 0.85
SNCA-203ENST00000394986 SLC39A8Q9C0K1 460 aa20.36■□□□□ 0.85
SNCA-203ENST00000394986 LRRC19Q9H756 370 aa20.36■□□□□ 0.85
SNCA-203ENST00000394986 PRDM16Q9HAZ2 1276 aa20.36■□□□□ 0.85
SNCA-203ENST00000394986 ALG6Q9Y672 507 aa20.36■□□□□ 0.85
SNCA-203ENST00000394986 BNIP3LO60238 219 aa20.35■□□□□ 0.85
SNCA-203ENST00000394986 RPP40O75818 363 aaKnown RBP20.35■□□□□ 0.85
SNCA-203ENST00000394986 CD160O95971 181 aa20.35■□□□□ 0.85
SNCA-203ENST00000394986 ETFBP38117 255 aa20.35■□□□□ 0.85
SNCA-203ENST00000394986 SLC1A1P43005 524 aa20.35■□□□□ 0.85
SNCA-203ENST00000394986 NAP1L1P55209 391 aaKnown RBP20.35■□□□□ 0.85
SNCA-203ENST00000394986 LPAL2Q16609 132 aa20.35■□□□□ 0.85
SNCA-203ENST00000394986 STK40Q8N2I9 435 aa20.35■□□□□ 0.85
SNCA-203ENST00000394986 KCTD6Q8NC69 237 aa20.35■□□□□ 0.85
SNCA-203ENST00000394986 GAB3Q8WWW8 586 aa20.35■□□□□ 0.85
SNCA-203ENST00000394986 FCF1Q9Y324 198 aaKnown RBP20.35■□□□□ 0.85
SNCA-203ENST00000394986 ADGRG1Q9Y653 693 aa20.35■□□□□ 0.85
SNCA-203ENST00000394986 MACROD2A1Z1Q3 448 aa20.34■□□□□ 0.85
SNCA-203ENST00000394986 BTNL10A8MVZ5 291 aa20.34■□□□□ 0.85
SNCA-203ENST00000394986 ZBTB24O43167 697 aaPredicted RBP20.34■□□□□ 0.85
SNCA-203ENST00000394986 ARHGAP6O43182 974 aa20.34■□□□□ 0.85
SNCA-203ENST00000394986 KRT1P04264 644 aa20.34■□□□□ 0.85
SNCA-203ENST00000394986 SERPINH1P50454 418 aaKnown RBP20.34■□□□□ 0.85
SNCA-203ENST00000394986 VASPP50552 380 aaPredicted RBP20.34■□□□□ 0.85
SNCA-203ENST00000394986 YBEYP58557 167 aaPredicted RBP20.34■□□□□ 0.85
SNCA-203ENST00000394986 SERINC3Q13530 473 aa20.34■□□□□ 0.85
SNCA-203ENST00000394986 PARP15Q460N3 678 aa20.34■□□□□ 0.85
SNCA-203ENST00000394986 RETSATQ6NUM9 610 aa20.34■□□□□ 0.85
SNCA-203ENST00000394986 C11orf63Q6NUN7 778 aa20.34■□□□□ 0.85
SNCA-203ENST00000394986 PRR23BQ6ZRT6 265 aa20.34■□□□□ 0.85
SNCA-203ENST00000394986 SIPA1Q96FS4 1042 aa20.34■□□□□ 0.85
SNCA-203ENST00000394986 TNKS2Q9H2K2 1166 aa20.34■□□□□ 0.85
SNCA-203ENST00000394986 CYP8B1Q9UNU6 501 aa20.34■□□□□ 0.85
SNCA-203ENST00000394986 LRRD1A4D1F6 860 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms