RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 AMPD1P23109 780 aa5.8□□□□□ -1.48
RFFL-202ENST00000394597 BDNFP23560 247 aa5.8□□□□□ -1.48
RFFL-202ENST00000394597 TKTP29401 623 aaKnown RBP5.8□□□□□ -1.48
RFFL-202ENST00000394597 CCND3P30281 292 aaPredicted RBP5.8□□□□□ -1.48
RFFL-202ENST00000394597 TM4SF4P48230 202 aa5.8□□□□□ -1.48
RFFL-202ENST00000394597 SLC5A3P53794 718 aa5.8□□□□□ -1.48
RFFL-202ENST00000394597 GEMIN4P57678 1058 aaKnown RBP5.8□□□□□ -1.48
RFFL-202ENST00000394597 RPL7AP62424 266 aaKnown RBP5.8□□□□□ -1.48
RFFL-202ENST00000394597 TUBA4AP68366 448 aa5.8□□□□□ -1.48
RFFL-202ENST00000394597 NADK2Q4G0N4 442 aa5.8□□□□□ -1.48
RFFL-202ENST00000394597 C10orf120Q5SQS8 335 aa5.8□□□□□ -1.48
RFFL-202ENST00000394597 FAAH2Q6GMR7 532 aa5.8□□□□□ -1.48
RFFL-202ENST00000394597 GDF6Q6KF10 455 aaPredicted RBP5.8□□□□□ -1.48
RFFL-202ENST00000394597 TMEM214Q6NUQ4 689 aaKnown RBP5.8□□□□□ -1.48
RFFL-202ENST00000394597 FAM183BPQ6ZVS7 135 aa5.8□□□□□ -1.48
RFFL-202ENST00000394597 PPIL6Q8IXY8 311 aa5.8□□□□□ -1.48
RFFL-202ENST00000394597 ZCCHC7Q8N3Z6 543 aaKnown RBP5.8□□□□□ -1.48
RFFL-202ENST00000394597 ATP6V0D2Q8N8Y2 350 aa5.8□□□□□ -1.48
RFFL-202ENST00000394597 ACTL9Q8TC94 416 aa5.8□□□□□ -1.48
RFFL-202ENST00000394597 CLPTM1LQ96KA5 538 aa5.8□□□□□ -1.48
RFFL-202ENST00000394597 ZFP42Q96MM3 310 aa5.8□□□□□ -1.48
RFFL-202ENST00000394597 SPON2Q9BUD6 331 aa5.8□□□□□ -1.48
RFFL-202ENST00000394597 ADNPQ9H2P0 1102 aa5.8□□□□□ -1.48
RFFL-202ENST00000394597 GOLGA2P5Q9HBQ8 144 aa5.8□□□□□ -1.48
RFFL-202ENST00000394597 XPO7Q9UIA9 1087 aaKnown RBP5.8□□□□□ -1.48
RFFL-202ENST00000394597 NRXN2Q9P2S2 1712 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 PCP4L1A6NKN8 68 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 MTSS1O43312 755 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 SAT1P21673 171 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 KDELR1P24390 212 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 NOS2P35228 1153 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 CCL23P55773 120 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 RAB15P59190 212 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 DAB2P98082 770 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 SLC25A3Q00325 362 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 RPS6KA2Q15349 733 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 ANO4Q32M45 955 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 GALNTL6Q49A17 601 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 PIGZQ86VD9 579 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 RYBPQ8N488 228 aaPredicted RBP5.79□□□□□ -1.48
RFFL-202ENST00000394597 SLC4A11Q8NBS3 891 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 LMO3Q8TAP4 145 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 TFB1MQ8WVM0 346 aaKnown RBP5.79□□□□□ -1.48
RFFL-202ENST00000394597 DACT3Q96B18 629 aaPredicted RBP5.79□□□□□ -1.48
RFFL-202ENST00000394597 TMA16Q96EY4 203 aaKnown RBP5.79□□□□□ -1.48
RFFL-202ENST00000394597 YME1L1Q96TA2 773 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 FSD1LQ9BXM9 530 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 FBXO44Q9H4M3 255 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 POPDC2Q9HBU9 364 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 TRIM39Q9HCM9 518 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 TAS2R1Q9NYW7 299 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 HACD3Q9P035 362 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 TEKT2Q9UIF3 430 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 AURKCQ9UQB9 309 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 ZNF510Q9Y2H8 683 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 A0A087WXM4 84 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 F5H423 210 aaPredicted RBP5.79□□□□□ -1.48
RFFL-202ENST00000394597 AMHP03971 560 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 ZNF12P17014 697 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 NUDT2P50583 147 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 AQP4P55087 323 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 XIAPP98170 497 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 CMPK2Q5EBM0 449 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 AAGABQ6PD74 315 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 MON1BQ7L1V2 547 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 FNDC8Q8TC99 324 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 SCYL1Q96KG9 808 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 DUSP16Q9BY84 665 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 FRMD8Q9BZ67 464 aaPredicted RBP5.79□□□□□ -1.48
RFFL-202ENST00000394597 ULBP1Q9BZM6 244 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 CEP44Q9C0F1 390 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 COPS7BQ9H9Q2 264 aaPredicted RBP5.79□□□□□ -1.48
RFFL-202ENST00000394597 C20orf96Q9NUD7 363 aaPredicted RBP5.79□□□□□ -1.48
RFFL-202ENST00000394597 TRMT13Q9NUP7 481 aaKnown RBP5.79□□□□□ -1.48
RFFL-202ENST00000394597 SNX13Q9Y5W8 968 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 ACTL7BQ9Y614 415 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 PTCH2Q9Y6C5 1203 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 MYH7BA7E2Y1 1941 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 DGKIO75912 1065 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 ITGBL1O95965 494 aaPredicted RBP5.79□□□□□ -1.48
RFFL-202ENST00000394597 URODP06132 367 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 USP17L7P0C7H9 530 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 UNGP13051 313 aaPredicted RBP5.79□□□□□ -1.48
RFFL-202ENST00000394597 PAMP19021 973 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 TGM2P21980 687 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 FDFT1P37268 417 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 HADHBP55084 474 aaKnown RBP5.79□□□□□ -1.48
RFFL-202ENST00000394597 LILRA4P59901 499 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 NRF1Q16656 503 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 PTPN20Q4JDL3 420 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 SLC39A12Q504Y0 691 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 AADACL2Q6P093 401 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 KLHL35Q6PF15 583 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 C16orf89Q6UX73 402 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 LRRC8DQ7L1W4 858 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 GET4Q7L5D6 327 aaPredicted RBP5.79□□□□□ -1.48
RFFL-202ENST00000394597 AMIGO2Q86SJ2 522 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 IFNLR1Q8IU57 520 aaPredicted RBP5.79□□□□□ -1.48
RFFL-202ENST00000394597 ATPAF2Q8N5M1 289 aa5.79□□□□□ -1.48
RFFL-202ENST00000394597 LRRC57Q8N9N7 239 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms