RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 GLOD4Q9HC38 313 aa15.26■□□□□ 0.03
CCT4-201ENST00000394440 SSU72Q9NP77 194 aaKnown RBP15.26■□□□□ 0.03
CCT4-201ENST00000394440 CXXC1Q9P0U4 656 aaPredicted RBP15.26■□□□□ 0.03
CCT4-201ENST00000394440 GMNCA6NCL1 334 aa15.26■□□□□ 0.03
CCT4-201ENST00000394440 PRRG1O14668 218 aa15.26■□□□□ 0.03
CCT4-201ENST00000394440 TYROBPO43914 113 aa15.26■□□□□ 0.03
CCT4-201ENST00000394440 FAM107AO95990 144 aa15.26■□□□□ 0.03
CCT4-201ENST00000394440 MAPKAPK2P49137 400 aa15.26■□□□□ 0.03
CCT4-201ENST00000394440 DNAJB7Q7Z6W7 309 aaPredicted RBP15.26■□□□□ 0.03
CCT4-201ENST00000394440 BADQ92934 168 aa15.26■□□□□ 0.03
CCT4-201ENST00000394440 AZIN2Q96A70 460 aa15.26■□□□□ 0.03
CCT4-201ENST00000394440 ZNF317Q96PQ6 595 aaPredicted RBP15.26■□□□□ 0.03
CCT4-201ENST00000394440 KCNK9Q9NPC2 374 aa15.26■□□□□ 0.03
CCT4-201ENST00000394440 FAM155BO75949 473 aa15.25■□□□□ 0.03
CCT4-201ENST00000394440 STC2O76061 302 aa15.25■□□□□ 0.03
CCT4-201ENST00000394440 SLC34A2O95436 690 aa15.25■□□□□ 0.03
CCT4-201ENST00000394440 INHBAP08476 426 aa15.25■□□□□ 0.03
CCT4-201ENST00000394440 CNPP09543 421 aaKnown RBP15.25■□□□□ 0.03
CCT4-201ENST00000394440 ELF1P32519 619 aa15.25■□□□□ 0.03
CCT4-201ENST00000394440 FPGSQ05932 587 aa15.25■□□□□ 0.03
CCT4-201ENST00000394440 TNK2Q07912 1038 aa15.25■□□□□ 0.03
CCT4-201ENST00000394440 HNRNPDQ14103 355 aaKnown RBP15.25■□□□□ 0.03
CCT4-201ENST00000394440 PRPSAP1Q14558 356 aa15.25■□□□□ 0.03
CCT4-201ENST00000394440 CRYMQ14894 314 aa15.25■□□□□ 0.03
CCT4-201ENST00000394440 ANO4Q32M45 955 aa15.25■□□□□ 0.03
CCT4-201ENST00000394440 CIR1Q86X95 450 aaPredicted RBP15.25■□□□□ 0.03
CCT4-201ENST00000394440 SP7Q8TDD2 431 aaPredicted RBP15.25■□□□□ 0.03
CCT4-201ENST00000394440 DENND1AQ8TEH3 1009 aa15.25■□□□□ 0.03
CCT4-201ENST00000394440 TTC17Q96AE7 1141 aa15.25■□□□□ 0.03
CCT4-201ENST00000394440 CCT8L2Q96SF2 557 aa15.25■□□□□ 0.03
CCT4-201ENST00000394440 RNF38Q9H0F5 515 aa15.25■□□□□ 0.03
CCT4-201ENST00000394440 IL21Q9HBE4 155 aa15.25■□□□□ 0.03
CCT4-201ENST00000394440 C2orf78A6NCI8 922 aa15.25■□□□□ 0.03
CCT4-201ENST00000394440 FAM47DPA6NHR8 397 aa15.25■□□□□ 0.03
CCT4-201ENST00000394440 F5H5T6 163 aa15.25■□□□□ 0.03
CCT4-201ENST00000394440 PSMD3O43242 534 aa15.25■□□□□ 0.03
CCT4-201ENST00000394440 KLKB1P03952 638 aa15.25■□□□□ 0.03
CCT4-201ENST00000394440 TMEM240Q5SV17 173 aa15.25■□□□□ 0.03
CCT4-201ENST00000394440 NAPEPLDQ6IQ20 393 aa15.25■□□□□ 0.03
CCT4-201ENST00000394440 FOXR1Q6PIV2 292 aa15.25■□□□□ 0.03
CCT4-201ENST00000394440 C4orf33Q8N1A6 199 aa15.25■□□□□ 0.03
CCT4-201ENST00000394440 PPM1NQ8N819 430 aa15.25■□□□□ 0.03
CCT4-201ENST00000394440 SMC6Q96SB8 1091 aa15.25■□□□□ 0.03
CCT4-201ENST00000394440 KLF16Q9BXK1 252 aaPredicted RBP15.25■□□□□ 0.03
CCT4-201ENST00000394440 NACA2Q9H009 215 aa15.25■□□□□ 0.03
CCT4-201ENST00000394440 RETREG1Q9H6L5 497 aa15.25■□□□□ 0.03
CCT4-201ENST00000394440 ZNF334Q9HCZ1 680 aaPredicted RBP15.25■□□□□ 0.03
CCT4-201ENST00000394440 RBM22Q9NW64 420 aaKnown RBP eCLIP15.25■□□□□ 0.034e-21■■■□□ 14.9
CCT4-201ENST00000394440 UXTQ9UBK9 157 aaPredicted RBP15.25■□□□□ 0.03
CCT4-201ENST00000394440 SMG5Q9UPR3 1016 aaKnown RBP15.25■□□□□ 0.03
CCT4-201ENST00000394440 AAR2Q9Y312 384 aaKnown RBP15.25■□□□□ 0.03
CCT4-201ENST00000394440 INSL6Q9Y581 213 aa15.25■□□□□ 0.03
CCT4-201ENST00000394440 IQANK1A0A1B0GTG1 560 aa15.24■□□□□ 0.03
CCT4-201ENST00000394440 F11P03951 625 aa15.24■□□□□ 0.03
CCT4-201ENST00000394440 HARS2P49590 506 aaKnown RBP15.24■□□□□ 0.03
CCT4-201ENST00000394440 EPHB3P54753 998 aa15.24■□□□□ 0.03
CCT4-201ENST00000394440 YBEYP58557 167 aaPredicted RBP15.24■□□□□ 0.03
CCT4-201ENST00000394440 NIPAL4Q0D2K0 466 aa15.24■□□□□ 0.03
CCT4-201ENST00000394440 PARP15Q460N3 678 aa15.24■□□□□ 0.03
CCT4-201ENST00000394440 CASC4Q6P4E1 433 aa15.24■□□□□ 0.03
CCT4-201ENST00000394440 SH2D5Q6ZV89 423 aa15.24■□□□□ 0.03
CCT4-201ENST00000394440 LGI2Q8N0V4 545 aa15.24■□□□□ 0.03
CCT4-201ENST00000394440 KLHL23Q8NBE8 558 aa15.24■□□□□ 0.03
CCT4-201ENST00000394440 SPATA22Q8NHS9 363 aa15.24■□□□□ 0.03
CCT4-201ENST00000394440 SGSM3Q96HU1 749 aa15.24■□□□□ 0.03
CCT4-201ENST00000394440 UBP1Q9NZI7 540 aa15.24■□□□□ 0.03
CCT4-201ENST00000394440 SSX2IPQ9Y2D8 614 aa15.24■□□□□ 0.03
CCT4-201ENST00000394440 J3KR12 359 aa15.24■□□□□ 0.03
CCT4-201ENST00000394440 NDUFAB1O14561 156 aa15.24■□□□□ 0.03
CCT4-201ENST00000394440 ANXA9O76027 345 aa15.24■□□□□ 0.03
CCT4-201ENST00000394440 OLFM2O95897 454 aa15.24■□□□□ 0.03
CCT4-201ENST00000394440 SLC11A2P49281 568 aa15.24■□□□□ 0.03
CCT4-201ENST00000394440 LRRC14Q15048 493 aa15.24■□□□□ 0.03
CCT4-201ENST00000394440 TAF12Q16514 161 aa15.24■□□□□ 0.03
CCT4-201ENST00000394440 LILRA6Q6PI73 481 aa15.24■□□□□ 0.03
CCT4-201ENST00000394440 MARK2Q7KZI7 788 aaKnown RBP15.24■□□□□ 0.03
CCT4-201ENST00000394440 TMEM135Q86UB9 458 aa15.24■□□□□ 0.03
CCT4-201ENST00000394440 CTAGE3PQ8IX95 158 aa15.24■□□□□ 0.03
CCT4-201ENST00000394440 TEX26Q8N6G2 289 aa15.24■□□□□ 0.03
CCT4-201ENST00000394440 ANKRD42Q8N9B4 389 aa15.24■□□□□ 0.03
CCT4-201ENST00000394440 ZNF473Q8WTR7 871 aaKnown RBP15.24■□□□□ 0.03
CCT4-201ENST00000394440 ZFRQ96KR1 1074 aaKnown RBP15.24■□□□□ 0.03
CCT4-201ENST00000394440 PRICKLE1Q96MT3 831 aaPredicted RBP15.24■□□□□ 0.03
CCT4-201ENST00000394440 PPP1R2P1Q96PQ5 205 aa15.24■□□□□ 0.03
CCT4-201ENST00000394440 BFARQ9NZS9 450 aa15.24■□□□□ 0.03
CCT4-201ENST00000394440 IKBKGQ9Y6K9 419 aa15.24■□□□□ 0.03
CCT4-201ENST00000394440 H3BNC9 293 aa15.23■□□□□ 0.03
CCT4-201ENST00000394440 TGM5O43548 720 aa15.23■□□□□ 0.03
CCT4-201ENST00000394440 UGT1A9O60656 530 aa15.23■□□□□ 0.03
CCT4-201ENST00000394440 RAMP2O60895 175 aa15.23■□□□□ 0.03
CCT4-201ENST00000394440 SPAG7O75391 227 aa15.23■□□□□ 0.03
CCT4-201ENST00000394440 MT-CYBP00156 380 aaPredicted RBP15.23■□□□□ 0.03
CCT4-201ENST00000394440 KRT4P19013 534 aa15.23■□□□□ 0.03
CCT4-201ENST00000394440 ADRA1AP35348 466 aa15.23■□□□□ 0.03
CCT4-201ENST00000394440 WDR4P57081 412 aaKnown RBP15.23■□□□□ 0.03
CCT4-201ENST00000394440 CDH17Q12864 832 aa15.23■□□□□ 0.03
CCT4-201ENST00000394440 SERINC3Q13530 473 aa15.23■□□□□ 0.03
CCT4-201ENST00000394440 FRG1Q14331 258 aaKnown RBP15.23■□□□□ 0.03
CCT4-201ENST00000394440 ZNF449Q6P9G9 518 aa15.23■□□□□ 0.03
CCT4-201ENST00000394440 RFWD3Q6PCD5 774 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms