RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 ROGDIQ9GZN7 287 aa17.42■□□□□ 0.38
SGCB-201ENST00000381431 RERGLQ9H628 205 aa17.42■□□□□ 0.38
SGCB-201ENST00000381431 TRIM45Q9H8W5 580 aaPredicted RBP17.42■□□□□ 0.38
SGCB-201ENST00000381431 ZMYM2Q9UBW7 1377 aa17.42■□□□□ 0.38
SGCB-201ENST00000381431 MON2Q7Z3U7 1717 aa17.42■□□□□ 0.38
SGCB-201ENST00000381431 F8W810 466 aa17.42■□□□□ 0.38
SGCB-201ENST00000381431 SMIM10L2AP0DMW4 78 aa17.42■□□□□ 0.38
SGCB-201ENST00000381431 SMIM10L2BP0DMW5 78 aa17.42■□□□□ 0.38
SGCB-201ENST00000381431 GLT6D1Q7Z4J2 308 aa17.42■□□□□ 0.38
SGCB-201ENST00000381431 RAB42Q8N4Z0 105 aa17.42■□□□□ 0.38
SGCB-201ENST00000381431 PLD5Q8N7P1 536 aa17.42■□□□□ 0.38
SGCB-201ENST00000381431 BHLHE22Q8NFJ8 381 aaPredicted RBP17.42■□□□□ 0.38
SGCB-201ENST00000381431 SLC25A23Q9BV35 468 aa17.42■□□□□ 0.38
SGCB-201ENST00000381431 MRPS15P82914 257 aaKnown RBP17.41■□□□□ 0.38
SGCB-201ENST00000381431 SREBF2Q12772 1141 aa17.41■□□□□ 0.38
SGCB-201ENST00000381431 FNBP1LQ5T0N5 605 aa17.41■□□□□ 0.38
SGCB-201ENST00000381431 PACS1Q6VY07 963 aa17.41■□□□□ 0.38
SGCB-201ENST00000381431 FAM13CQ8NE31 585 aa17.41■□□□□ 0.38
SGCB-201ENST00000381431 GPR20Q99678 358 aa17.41■□□□□ 0.38
SGCB-201ENST00000381431 DPY30Q9C005 99 aa17.41■□□□□ 0.38
SGCB-201ENST00000381431 LRMDAQ9H2I8 198 aa17.41■□□□□ 0.38
SGCB-201ENST00000381431 SNX15Q9NRS6 342 aa17.41■□□□□ 0.38
SGCB-201ENST00000381431 XPR1Q9UBH6 696 aa17.41■□□□□ 0.38
SGCB-201ENST00000381431 TUBGCP4Q9UGJ1 667 aa17.41■□□□□ 0.38
SGCB-201ENST00000381431 SFMBT1Q9UHJ3 866 aa17.41■□□□□ 0.38
SGCB-201ENST00000381431 RPTORQ8N122 1335 aa17.41■□□□□ 0.38
SGCB-201ENST00000381431 GNG14A0A1W2PPG7 69 aa17.41■□□□□ 0.38
SGCB-201ENST00000381431 EPB42P16452 691 aa17.41■□□□□ 0.38
SGCB-201ENST00000381431 NEK2P51955 445 aa17.41■□□□□ 0.38
SGCB-201ENST00000381431 CDC16Q13042 620 aa17.41■□□□□ 0.38
SGCB-201ENST00000381431 RAP1GAP2Q684P5 730 aa17.41■□□□□ 0.38
SGCB-201ENST00000381431 XYLT1Q86Y38 959 aa17.41■□□□□ 0.38
SGCB-201ENST00000381431 TNIP2Q8NFZ5 429 aa17.41■□□□□ 0.38
SGCB-201ENST00000381431 PHACTR1Q9C0D0 580 aa17.41■□□□□ 0.38
SGCB-201ENST00000381431 FBXO5Q9UKT4 447 aa17.41■□□□□ 0.38
SGCB-201ENST00000381431 UBR1Q8IWV7 1749 aa17.41■□□□□ 0.38
SGCB-201ENST00000381431 HDAC3O15379 428 aa17.41■□□□□ 0.38
SGCB-201ENST00000381431 TFEBP19484 476 aa17.41■□□□□ 0.38
SGCB-201ENST00000381431 LRPAP1P30533 357 aa17.41■□□□□ 0.38
SGCB-201ENST00000381431 SCARA3Q6AZY7 606 aa17.41■□□□□ 0.38
SGCB-201ENST00000381431 TMEM86AQ8N2M4 240 aa17.41■□□□□ 0.38
SGCB-201ENST00000381431 SIKE1Q9BRV8 207 aa17.41■□□□□ 0.38
SGCB-201ENST00000381431 LHX5Q9H2C1 402 aa17.41■□□□□ 0.38
SGCB-201ENST00000381431 POLG2Q9UHN1 485 aa17.41■□□□□ 0.38
SGCB-201ENST00000381431 MAPK10P53779 464 aa17.41■□□□□ 0.38
SGCB-201ENST00000381431 SPIRE1Q08AE8 756 aa17.41■□□□□ 0.38
SGCB-201ENST00000381431 XRCC4Q13426 336 aa17.41■□□□□ 0.38
SGCB-201ENST00000381431 CERCAMQ5T4B2 595 aa17.41■□□□□ 0.38
SGCB-201ENST00000381431 SCIMPQ6UWF3 145 aa17.41■□□□□ 0.38
SGCB-201ENST00000381431 LPCAT2Q7L5N7 544 aa17.41■□□□□ 0.38
SGCB-201ENST00000381431 YAF2Q8IY57 180 aa17.41■□□□□ 0.38
SGCB-201ENST00000381431 ATG16L2Q8NAA4 619 aa17.41■□□□□ 0.38
SGCB-201ENST00000381431 PCDHA2Q9Y5H9 948 aa17.41■□□□□ 0.38
SGCB-201ENST00000381431 TRPV2Q9Y5S1 764 aa17.41■□□□□ 0.38
SGCB-201ENST00000381431 PRRC2BQ5JSZ5 2229 aaKnown RBP17.41■□□□□ 0.38
SGCB-201ENST00000381431 TBKBP1A7MCY6 615 aa17.4■□□□□ 0.38
SGCB-201ENST00000381431 PEX11AO75192 247 aa17.4■□□□□ 0.38
SGCB-201ENST00000381431 COX4I1P13073 169 aa17.4■□□□□ 0.38
SGCB-201ENST00000381431 PRKAA2P54646 552 aa17.4■□□□□ 0.38
SGCB-201ENST00000381431 CDH13P55290 713 aa17.4■□□□□ 0.38
SGCB-201ENST00000381431 NUP107P57740 925 aa17.4■□□□□ 0.38
SGCB-201ENST00000381431 RETSATQ6NUM9 610 aa17.4■□□□□ 0.38
SGCB-201ENST00000381431 LBX2Q6XYB7 198 aa17.4■□□□□ 0.38
SGCB-201ENST00000381431 TTC7BQ86TV6 843 aa17.4■□□□□ 0.38
SGCB-201ENST00000381431 SLC44A1Q8WWI5 657 aa17.4■□□□□ 0.38
SGCB-201ENST00000381431 ABCC13Q9NSE7 274 aa17.4■□□□□ 0.38
SGCB-201ENST00000381431 CNTRLQ7Z7A1 2325 aa17.4■□□□□ 0.38
SGCB-201ENST00000381431 STK25O00506 426 aa17.4■□□□□ 0.38
SGCB-201ENST00000381431 PGM3O95394 542 aa17.4■□□□□ 0.38
SGCB-201ENST00000381431 CYP1A1P04798 512 aaPredicted RBP17.4■□□□□ 0.38
SGCB-201ENST00000381431 GSSP48637 474 aa17.4■□□□□ 0.38
SGCB-201ENST00000381431 MRPS5P82675 430 aaKnown RBP17.4■□□□□ 0.38
SGCB-201ENST00000381431 NAB1Q13506 487 aa17.4■□□□□ 0.38
SGCB-201ENST00000381431 SAMD4BQ5PRF9 694 aaKnown RBP17.4■□□□□ 0.38
SGCB-201ENST00000381431 PMF1Q6P1K2 205 aa17.4■□□□□ 0.38
SGCB-201ENST00000381431 C16orf59Q7L2K0 433 aa17.4■□□□□ 0.38
SGCB-201ENST00000381431 KIAA2013Q8IYS2 634 aa17.4■□□□□ 0.38
SGCB-201ENST00000381431 GSTCDQ8NEC7 633 aa17.4■□□□□ 0.38
SGCB-201ENST00000381431 RMND5BQ96G75 393 aaPredicted RBP17.4■□□□□ 0.38
SGCB-201ENST00000381431 EXOC2Q96KP1 924 aa17.4■□□□□ 0.38
SGCB-201ENST00000381431 CSPG4P5Q96PW8 444 aa17.4■□□□□ 0.38
SGCB-201ENST00000381431 WDR55Q9H6Y2 383 aaPredicted RBP17.4■□□□□ 0.38
SGCB-201ENST00000381431 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.4■□□□□ 0.38
SGCB-201ENST00000381431 ADGRA3Q8IWK6 1321 aa17.4■□□□□ 0.38
SGCB-201ENST00000381431 TTLL13PA6NNM8 815 aa17.4■□□□□ 0.38
SGCB-201ENST00000381431 C2P06681 752 aa17.4■□□□□ 0.38
SGCB-201ENST00000381431 RUNX1T1Q06455 604 aa17.4■□□□□ 0.38
SGCB-201ENST00000381431 BOP1Q14137 746 aaKnown RBP17.4■□□□□ 0.38
SGCB-201ENST00000381431 NEDD8Q15843 81 aa17.4■□□□□ 0.38
SGCB-201ENST00000381431 ARCQ7LC44 396 aa17.4■□□□□ 0.38
SGCB-201ENST00000381431 OR52K2Q8NGK3 314 aa17.4■□□□□ 0.38
SGCB-201ENST00000381431 TLCD1Q96CP7 247 aa17.4■□□□□ 0.38
SGCB-201ENST00000381431 PLEKHA8Q96JA3 519 aa17.4■□□□□ 0.38
SGCB-201ENST00000381431 TBCDQ9BTW9 1192 aa17.4■□□□□ 0.38
SGCB-201ENST00000381431 POLR1EQ9GZS1 481 aaKnown RBP17.4■□□□□ 0.38
SGCB-201ENST00000381431 ANKRD6Q9Y2G4 727 aa17.4■□□□□ 0.38
SGCB-201ENST00000381431 EME2A4GXA9 379 aaPredicted RBP17.39■□□□□ 0.38
SGCB-201ENST00000381431 CILPO75339 1184 aa17.39■□□□□ 0.38
SGCB-201ENST00000381431 LDLRP01130 860 aa17.39■□□□□ 0.38
SGCB-201ENST00000381431 TSHRP16473 764 aa17.39■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms