RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 COQ10BQ9H8M1 238 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 NMRAL1Q9HBL8 299 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 GID8Q9NWU2 228 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 MTMR10Q9NXD2 777 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 WDR27A2RRH5 827 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 BBIP1A8MTZ0 92 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 NOP56O00567 594 aaKnown RBP8.35□□□□□ -1.07
PTPRR-203ENST00000378778 TRIM24O15164 1050 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 DNAJB5O75953 348 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 INHBBP09529 407 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 HOXC6P09630 235 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 JUNBP17275 347 aaPredicted RBP8.35□□□□□ -1.07
PTPRR-203ENST00000378778 CYP2F1P24903 491 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 ERFP50548 548 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 PSME3P61289 254 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 MS4A2Q01362 244 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 INCA1Q0VD86 236 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 PRKG1Q13976 671 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 MXD4Q14582 209 aaPredicted RBP8.35□□□□□ -1.07
PTPRR-203ENST00000378778 C16orf72Q14CZ0 275 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 MTERF2Q49AM1 385 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 TBC1D10BQ4KMP7 808 aaPredicted RBP8.35□□□□□ -1.07
PTPRR-203ENST00000378778 DCDC5Q6ZRR9 648 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 CHSY3Q70JA7 882 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 FKBP9P1Q75LS8 142 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 ANKRD13AQ8IZ07 590 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 GALNT4Q8N4A0 578 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 SCAIQ8N9R8 606 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 ROPN1LQ96C74 230 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 PLEKHA8Q96JA3 519 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 SLC45A3Q96JT2 553 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 ZBTB45Q96K62 511 aaPredicted RBP8.35□□□□□ -1.07
PTPRR-203ENST00000378778 ACO2Q99798 780 aaKnown RBP8.35□□□□□ -1.07
PTPRR-203ENST00000378778 SLX1AQ9BQ83 275 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 C9orf16Q9BUW7 83 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 GATA5Q9BWX5 397 aaPredicted RBP8.35□□□□□ -1.07
PTPRR-203ENST00000378778 BRD8Q9H0E9 1235 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 CAAP1Q9H8G2 361 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 HEY1Q9Y5J3 304 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 COL11A2P13942 1736 aaPredicted RBP8.35□□□□□ -1.07
PTPRR-203ENST00000378778 IGKV6D-21A0A0A0MT36 114 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.35□□□□□ -1.07
PTPRR-203ENST00000378778 FUOMA2VDF0 154 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 C7orf72A4D263 438 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 M0QYV0 167 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 SUPT3HO75486 399 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 DDHD2O94830 711 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 OCM2P0CE71 109 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 OCMP0CE72 109 aaPredicted RBP8.35□□□□□ -1.07
PTPRR-203ENST00000378778 TFEBP19484 476 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 ARRB2P32121 409 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 ENTPD1P49961 510 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 DNAJB13P59910 316 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 MPP3Q13368 585 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 CYTH1Q15438 398 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 TAF5Q15542 800 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 BCL2A1Q16548 175 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 FAM98CQ17RN3 349 aaKnown RBP8.35□□□□□ -1.07
PTPRR-203ENST00000378778 DCLRE1AQ6PJP8 1040 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 ERMP1Q7Z2K6 904 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 ERO1BQ86YB8 467 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 NT5DC4Q86YG4 428 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 CCDC60Q8IWA6 550 aaPredicted RBP8.35□□□□□ -1.07
PTPRR-203ENST00000378778 MPP5Q8N3R9 675 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 DCLK2Q8N568 766 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 CXorf38Q8TB03 319 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 ARNTL2Q8WYA1 636 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 CENPIQ92674 756 aaPredicted RBP8.35□□□□□ -1.07
PTPRR-203ENST00000378778 C12orf43Q96C57 262 aaKnown RBP8.35□□□□□ -1.07
PTPRR-203ENST00000378778 CCDC126Q96EE4 140 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 ABHD8Q96I13 439 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 MAGED4Q96JG8 741 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 KLHL32Q96NJ5 620 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 OR52B2Q96RD2 323 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 WRNIP1Q96S55 665 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 BCL7BQ9BQE9 202 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 SNRNP25Q9BV90 132 aaKnown RBP8.35□□□□□ -1.07
PTPRR-203ENST00000378778 ZNF302Q9NR11 478 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 FBXO28Q9NVF7 368 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 ARHGEF38Q9NXL2 777 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 LOC285556D6RIA3 1793 aa8.35□□□□□ -1.07
PTPRR-203ENST00000378778 TCAF2A6NFQ2 919 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 PSMD12O00232 456 aaPredicted RBP8.34□□□□□ -1.07
PTPRR-203ENST00000378778 KPNA4O00629 521 aaPredicted RBP8.34□□□□□ -1.07
PTPRR-203ENST00000378778 PSMD3O43242 534 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 GRID2O43424 1007 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 AKAP10O43572 662 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 MSCO60682 206 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 MAFO75444 373 aaPredicted RBP8.34□□□□□ -1.07
PTPRR-203ENST00000378778 ALOX5P09917 674 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 ENO3P13929 434 aaPredicted RBP8.34□□□□□ -1.07
PTPRR-203ENST00000378778 EPHA3P29320 983 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 NPY2RP49146 381 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 NDST2P52849 883 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 SOX10P56693 466 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 SLC6A3Q01959 620 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 GALNT1Q10472 559 aaPredicted RBP8.34□□□□□ -1.07
PTPRR-203ENST00000378778 FSTL1Q12841 308 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 BNIP2Q12982 314 aa8.34□□□□□ -1.07
PTPRR-203ENST00000378778 BTG3Q14201 252 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms