RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 OSBPL2Q9H1P3 480 aa17.25■□□□□ 0.35
HMGN4-201ENST00000377575 HAUS4Q9H6D7 363 aa17.25■□□□□ 0.35
HMGN4-201ENST00000377575 RETREG1Q9H6L5 497 aa17.25■□□□□ 0.35
HMGN4-201ENST00000377575 VPS51Q9UID3 782 aa17.25■□□□□ 0.35
HMGN4-201ENST00000377575 ASCC3Q8N3C0 2202 aaKnown RBP17.25■□□□□ 0.35
HMGN4-201ENST00000377575 TCRBV5S1A1TA0A578 114 aa17.24■□□□□ 0.35
HMGN4-201ENST00000377575 BCAT2O15382 392 aaPredicted RBP17.24■□□□□ 0.35
HMGN4-201ENST00000377575 CCP110O43303 1012 aa17.24■□□□□ 0.35
HMGN4-201ENST00000377575 RNASEH2AO75792 299 aaKnown RBP17.24■□□□□ 0.35
HMGN4-201ENST00000377575 VAV1P15498 845 aa17.24■□□□□ 0.35
HMGN4-201ENST00000377575 RRM1P23921 792 aa17.24■□□□□ 0.35
HMGN4-201ENST00000377575 SLC8A1P32418 973 aa17.24■□□□□ 0.35
HMGN4-201ENST00000377575 PRKCIP41743 596 aa17.24■□□□□ 0.35
HMGN4-201ENST00000377575 CLCN6P51797 869 aa17.24■□□□□ 0.35
HMGN4-201ENST00000377575 UBASH3AP57075 661 aa17.24■□□□□ 0.35
HMGN4-201ENST00000377575 KLHL30Q0D2K2 578 aa17.24■□□□□ 0.35
HMGN4-201ENST00000377575 DLG2Q15700 870 aa17.24■□□□□ 0.35
HMGN4-201ENST00000377575 RAB6CQ53S08 254 aa17.24■□□□□ 0.35
HMGN4-201ENST00000377575 MANEALQ5VSG8 457 aa17.24■□□□□ 0.35
HMGN4-201ENST00000377575 RWDD4Q6NW29 188 aaKnown RBP17.24■□□□□ 0.35
HMGN4-201ENST00000377575 CCDC185Q8N715 623 aa17.24■□□□□ 0.35
HMGN4-201ENST00000377575 ATP11CQ8NB49 1132 aa17.24■□□□□ 0.35
HMGN4-201ENST00000377575 TBC1D31Q96DN5 1066 aa17.24■□□□□ 0.35
HMGN4-201ENST00000377575 IQCDQ96DY2 449 aa17.24■□□□□ 0.35
HMGN4-201ENST00000377575 FAM129BQ96TA1 746 aa17.24■□□□□ 0.35
HMGN4-201ENST00000377575 ZDHHC5Q9C0B5 715 aa17.24■□□□□ 0.35
HMGN4-201ENST00000377575 RAB6CQ9H0N0 254 aa17.24■□□□□ 0.35
HMGN4-201ENST00000377575 FSCN3Q9NQT6 498 aa17.24■□□□□ 0.35
HMGN4-201ENST00000377575 ZNF212Q9UDV6 495 aa17.24■□□□□ 0.35
HMGN4-201ENST00000377575 ADAMTS1Q9UHI8 967 aa17.24■□□□□ 0.35
HMGN4-201ENST00000377575 EIF2B4Q9UI10 523 aaKnown RBP17.24■□□□□ 0.35
HMGN4-201ENST00000377575 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.24■□□□□ 0.35
HMGN4-201ENST00000377575 FARP1Q9Y4F1 1045 aaPredicted RBP17.24■□□□□ 0.35
HMGN4-201ENST00000377575 PLXNA2O75051 1894 aa17.24■□□□□ 0.35
HMGN4-201ENST00000377575 A0A0D9SEW6 157 aa17.23■□□□□ 0.35
HMGN4-201ENST00000377575 A0A1W2PQJ5 194 aa17.23■□□□□ 0.35
HMGN4-201ENST00000377575 LRRC72A6NJI9 287 aa17.23■□□□□ 0.35
HMGN4-201ENST00000377575 TMCO5BA8MYB1 307 aa17.23■□□□□ 0.35
HMGN4-201ENST00000377575 C1QTNF3-AMACRE9PGA6 284 aa17.23■□□□□ 0.35
HMGN4-201ENST00000377575 SNAP91O60641 907 aa17.23■□□□□ 0.35
HMGN4-201ENST00000377575 OPHN1O60890 802 aa17.23■□□□□ 0.35
HMGN4-201ENST00000377575 FSBPO95073 299 aa17.23■□□□□ 0.35
HMGN4-201ENST00000377575 SRCP12931 536 aa17.23■□□□□ 0.35
HMGN4-201ENST00000377575 GOT1P17174 413 aa17.23■□□□□ 0.35
HMGN4-201ENST00000377575 ETFBP38117 255 aa17.23■□□□□ 0.35
HMGN4-201ENST00000377575 MAPKAPK2P49137 400 aa17.23■□□□□ 0.35
HMGN4-201ENST00000377575 AIF1P55008 147 aa17.23■□□□□ 0.35
HMGN4-201ENST00000377575 SCAPQ12770 1279 aa17.23■□□□□ 0.35
HMGN4-201ENST00000377575 EFHC2Q5JST6 749 aa17.23■□□□□ 0.35
HMGN4-201ENST00000377575 PPP1R15BQ5SWA1 713 aa17.23■□□□□ 0.35
HMGN4-201ENST00000377575 FAM46CQ5VWP2 391 aa17.23■□□□□ 0.35
HMGN4-201ENST00000377575 Q6ZVU0 165 aa17.23■□□□□ 0.35
HMGN4-201ENST00000377575 SLFN11Q7Z7L1 901 aa17.23■□□□□ 0.35
HMGN4-201ENST00000377575 MINDY1Q8N5J2 469 aa17.23■□□□□ 0.35
HMGN4-201ENST00000377575 CNPY3Q9BT09 278 aa17.23■□□□□ 0.35
HMGN4-201ENST00000377575 ATP13A1Q9HD20 1204 aa17.23■□□□□ 0.35
HMGN4-201ENST00000377575 PARVAQ9NVD7 372 aa17.23■□□□□ 0.35
HMGN4-201ENST00000377575 TAS2R14Q9NYV8 317 aa17.23■□□□□ 0.35
HMGN4-201ENST00000377575 SERGEFQ9UGK8 458 aa17.23■□□□□ 0.35
HMGN4-201ENST00000377575 NCOR2Q9Y618 2525 aa17.23■□□□□ 0.35
HMGN4-201ENST00000377575 KCNK5O95279 499 aa17.22■□□□□ 0.35
HMGN4-201ENST00000377575 PLEKP08567 350 aaPredicted RBP17.22■□□□□ 0.35
HMGN4-201ENST00000377575 GZMAP12544 262 aa17.22■□□□□ 0.35
HMGN4-201ENST00000377575 RHOQP17081 205 aa17.22■□□□□ 0.35
HMGN4-201ENST00000377575 NOVA1P51513 510 aaKnown RBP17.22■□□□□ 0.35
HMGN4-201ENST00000377575 AFF3P51826 1226 aaKnown RBP17.22■□□□□ 0.35
HMGN4-201ENST00000377575 RPL7AP62424 266 aaKnown RBP17.22■□□□□ 0.35
HMGN4-201ENST00000377575 GNA12Q03113 381 aa17.22■□□□□ 0.35
HMGN4-201ENST00000377575 GRIK2Q13002 908 aa17.22■□□□□ 0.35
HMGN4-201ENST00000377575 ARTNQ5T4W7 220 aa17.22■□□□□ 0.35
HMGN4-201ENST00000377575 E4F1Q66K89 784 aaPredicted RBP17.22■□□□□ 0.35
HMGN4-201ENST00000377575 KIAA0895LQ68EN5 471 aa17.22■□□□□ 0.35
HMGN4-201ENST00000377575 PSAPL1Q6NUJ1 521 aa17.22■□□□□ 0.35
HMGN4-201ENST00000377575 RETSATQ6NUM9 610 aa17.22■□□□□ 0.35
HMGN4-201ENST00000377575 SCYL2Q6P3W7 929 aa17.22■□□□□ 0.35
HMGN4-201ENST00000377575 ZNF571Q7Z3V5 609 aaPredicted RBP17.22■□□□□ 0.35
HMGN4-201ENST00000377575 DRC7Q8IY82 874 aa17.22■□□□□ 0.35
HMGN4-201ENST00000377575 AADATQ8N5Z0 425 aa17.22■□□□□ 0.35
HMGN4-201ENST00000377575 OR7D4Q8NG98 312 aa17.22■□□□□ 0.35
HMGN4-201ENST00000377575 OR2T34Q8NGX1 318 aa17.22■□□□□ 0.35
HMGN4-201ENST00000377575 BIRC7Q96CA5 298 aa17.22■□□□□ 0.35
HMGN4-201ENST00000377575 TRIM11Q96F44 468 aa17.22■□□□□ 0.35
HMGN4-201ENST00000377575 NEUROG2Q9H2A3 272 aa17.22■□□□□ 0.35
HMGN4-201ENST00000377575 TMEM248Q9NWD8 314 aa17.22■□□□□ 0.35
HMGN4-201ENST00000377575 TPX2Q9ULW0 747 aaKnown RBP17.22■□□□□ 0.35
HMGN4-201ENST00000377575 TMEM131Q92545 1883 aa17.21■□□□□ 0.35
HMGN4-201ENST00000377575 FAM47DPA6NHR8 397 aa17.21■□□□□ 0.35
HMGN4-201ENST00000377575 CBX4O00257 560 aa17.21■□□□□ 0.35
HMGN4-201ENST00000377575 MCF2LO15068 1137 aa17.21■□□□□ 0.35
HMGN4-201ENST00000377575 BNIP3LO60238 219 aa17.21■□□□□ 0.35
HMGN4-201ENST00000377575 LRIG2O94898 1065 aa17.21■□□□□ 0.35
HMGN4-201ENST00000377575 TPM3P06753 285 aa17.21■□□□□ 0.35
HMGN4-201ENST00000377575 ADRB1P08588 477 aa17.21■□□□□ 0.35
HMGN4-201ENST00000377575 CSRP1P21291 193 aaKnown RBP17.21■□□□□ 0.35
HMGN4-201ENST00000377575 CD27P26842 260 aa17.21■□□□□ 0.35
HMGN4-201ENST00000377575 PBX1P40424 430 aa17.21■□□□□ 0.35
HMGN4-201ENST00000377575 ADPRHP54922 357 aa17.21■□□□□ 0.35
HMGN4-201ENST00000377575 MAMLD1Q13495 774 aa17.21■□□□□ 0.35
HMGN4-201ENST00000377575 TEAD4Q15561 434 aa17.21■□□□□ 0.35
HMGN4-201ENST00000377575 TDRD12Q587J7 1177 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms