RNA–Protein interactions for RNA: ENST00000377017.5

TIMP1-202, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2 BASIC

Gene TIMP1, Length 626 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-202ENST00000377017 TTC7AQ9ULT0 858 aaPredicted RBP13.47□□□□□ -0.25
TIMP1-202ENST00000377017 NDRG2Q9UN36 371 aaKnown RBP13.47□□□□□ -0.25
TIMP1-202ENST00000377017 PLA2G4CQ9UP65 541 aa13.47□□□□□ -0.25
TIMP1-202ENST00000377017 SLC8A2Q9UPR5 921 aa13.47□□□□□ -0.25
TIMP1-202ENST00000377017 OR51B4Q9Y5P0 310 aa13.47□□□□□ -0.25
TIMP1-202ENST00000377017 F5P12259 2224 aa13.46□□□□□ -0.25
TIMP1-202ENST00000377017 KRBA1A5PL33 1030 aa13.46□□□□□ -0.25
TIMP1-202ENST00000377017 HACD1B0YJ81 288 aa13.46□□□□□ -0.25
TIMP1-202ENST00000377017 ESPNB1AK53 854 aa13.46□□□□□ -0.25
TIMP1-202ENST00000377017 STK25O00506 426 aa13.46□□□□□ -0.25
TIMP1-202ENST00000377017 MCF2LO15068 1137 aa13.46□□□□□ -0.25
TIMP1-202ENST00000377017 KDELR3O43731 214 aa13.46□□□□□ -0.25
TIMP1-202ENST00000377017 SRPRAP08240 638 aaKnown RBP13.46□□□□□ -0.25
TIMP1-202ENST00000377017 DLDP09622 509 aaKnown RBP13.46□□□□□ -0.25
TIMP1-202ENST00000377017 GARSP41250 739 aaKnown RBP13.46□□□□□ -0.25
TIMP1-202ENST00000377017 PAFAH1B1P43034 410 aa13.46□□□□□ -0.25
TIMP1-202ENST00000377017 ECT2LQ008S8 904 aa13.46□□□□□ -0.25
TIMP1-202ENST00000377017 ZNF33AQ06730 810 aa13.46□□□□□ -0.25
TIMP1-202ENST00000377017 KLF1Q13351 362 aaPredicted RBP13.46□□□□□ -0.25
TIMP1-202ENST00000377017 UBXN2BQ14CS0 331 aa13.46□□□□□ -0.25
TIMP1-202ENST00000377017 NOMO1Q15155 1222 aa13.46□□□□□ -0.25
TIMP1-202ENST00000377017 FSTL4Q6MZW2 842 aa13.46□□□□□ -0.25
TIMP1-202ENST00000377017 TRMT11Q7Z4G4 463 aaKnown RBP13.46□□□□□ -0.25
TIMP1-202ENST00000377017 SYNPOQ8N3V7 929 aa13.46□□□□□ -0.25
TIMP1-202ENST00000377017 RASGEF1CQ8N431 466 aa13.46□□□□□ -0.25
TIMP1-202ENST00000377017 CCNYQ8ND76 341 aa13.46□□□□□ -0.25
TIMP1-202ENST00000377017 KIF18AQ8NI77 898 aa13.46□□□□□ -0.25
TIMP1-202ENST00000377017 ACTRT1Q8TDG2 376 aa13.46□□□□□ -0.25
TIMP1-202ENST00000377017 CASKIN2Q8WXE0 1202 aa13.46□□□□□ -0.25
TIMP1-202ENST00000377017 HAUS1Q96CS2 278 aa13.46□□□□□ -0.25
TIMP1-202ENST00000377017 HDAC11Q96DB2 347 aa13.46□□□□□ -0.25
TIMP1-202ENST00000377017 TBC1D17Q9HA65 648 aa13.46□□□□□ -0.25
TIMP1-202ENST00000377017 LTB4R2Q9NPC1 389 aa13.46□□□□□ -0.25
TIMP1-202ENST00000377017 HOMER3Q9NSC5 361 aa13.46□□□□□ -0.25
TIMP1-202ENST00000377017 HAUS2Q9NVX0 235 aa13.46□□□□□ -0.25
TIMP1-202ENST00000377017 IPO11Q9UI26 975 aaKnown RBP13.46□□□□□ -0.25
TIMP1-202ENST00000377017 VPS51Q9UID3 782 aa13.46□□□□□ -0.25
TIMP1-202ENST00000377017 STARD13Q9Y3M8 1113 aa13.46□□□□□ -0.25
TIMP1-202ENST00000377017 NYNRINQ9P2P1 1898 aaKnown RBP13.46□□□□□ -0.26
TIMP1-202ENST00000377017 GOLGA6L10A0A0M3HER8 536 aa13.45□□□□□ -0.26
TIMP1-202ENST00000377017 PRRT4C9JH25 899 aa13.45□□□□□ -0.26
TIMP1-202ENST00000377017 PRAMEF11O60813 436 aa13.45□□□□□ -0.26
TIMP1-202ENST00000377017 EGFP01133 1207 aa13.45□□□□□ -0.26
TIMP1-202ENST00000377017 PECAM1P16284 738 aaPredicted RBP13.45□□□□□ -0.26
TIMP1-202ENST00000377017 CD72P21854 359 aa13.45□□□□□ -0.26
TIMP1-202ENST00000377017 CLCN6P51797 869 aa13.45□□□□□ -0.26
TIMP1-202ENST00000377017 MRPS21P82921 87 aaKnown RBP13.45□□□□□ -0.26
TIMP1-202ENST00000377017 OTUD4Q01804 1114 aaKnown RBP13.45□□□□□ -0.26
TIMP1-202ENST00000377017 IL10RBQ08334 325 aa13.45□□□□□ -0.26
TIMP1-202ENST00000377017 ADCY2Q08462 1091 aa13.45□□□□□ -0.26
TIMP1-202ENST00000377017 PPIDQ08752 370 aaKnown RBP13.45□□□□□ -0.26
TIMP1-202ENST00000377017 SLC10A2Q12908 348 aaPredicted RBP13.45□□□□□ -0.26
TIMP1-202ENST00000377017 XRCC4Q13426 336 aa13.45□□□□□ -0.26
TIMP1-202ENST00000377017 HSF5Q4G112 596 aaPredicted RBP13.45□□□□□ -0.26
TIMP1-202ENST00000377017 TMCO4Q5TGY1 634 aa13.45□□□□□ -0.26
TIMP1-202ENST00000377017 TMEM215Q68D42 235 aa13.45□□□□□ -0.26
TIMP1-202ENST00000377017 NPNTQ6UXI9 565 aa13.45□□□□□ -0.26
TIMP1-202ENST00000377017 TRIM67Q6ZTA4 783 aa13.45□□□□□ -0.26
TIMP1-202ENST00000377017 CDKL3Q8IVW4 592 aaPredicted RBP13.45□□□□□ -0.26
TIMP1-202ENST00000377017 BBS5Q8N3I7 341 aa13.45□□□□□ -0.26
TIMP1-202ENST00000377017 KDM1BQ8NB78 822 aa13.45□□□□□ -0.26
TIMP1-202ENST00000377017 ACTL9Q8TC94 416 aa13.45□□□□□ -0.26
TIMP1-202ENST00000377017 COG1Q8WTW3 980 aa13.45□□□□□ -0.26
TIMP1-202ENST00000377017 TFB1MQ8WVM0 346 aaKnown RBP13.45□□□□□ -0.26
TIMP1-202ENST00000377017 ZNF599Q96NL3 588 aa13.45□□□□□ -0.26
TIMP1-202ENST00000377017 OLFM3Q96PB7 478 aa13.45□□□□□ -0.26
TIMP1-202ENST00000377017 TSGA13Q96PP4 275 aa13.45□□□□□ -0.26
TIMP1-202ENST00000377017 HERPUD2Q9BSE4 406 aa13.45□□□□□ -0.26
TIMP1-202ENST00000377017 OSBPL6Q9BZF3 934 aa13.45□□□□□ -0.26
TIMP1-202ENST00000377017 FBRSL1Q9HCM7 1045 aaKnown RBP13.45□□□□□ -0.26
TIMP1-202ENST00000377017 UBA2Q9UBT2 640 aaPredicted RBP13.45□□□□□ -0.26
TIMP1-202ENST00000377017 ERVW-1Q9UQF0 538 aa13.45□□□□□ -0.26
TIMP1-202ENST00000377017 SHROOM3Q8TF72 1996 aa13.44□□□□□ -0.26
TIMP1-202ENST00000377017 SHISA7A6NL88 538 aa13.44□□□□□ -0.26
TIMP1-202ENST00000377017 FAM170BA6NMN3 283 aa13.44□□□□□ -0.26
TIMP1-202ENST00000377017 H7C0C1 242 aa13.44□□□□□ -0.26
TIMP1-202ENST00000377017 K7EQS6 105 aa13.44□□□□□ -0.26
TIMP1-202ENST00000377017 MTSS1O43312 755 aa13.44□□□□□ -0.26
TIMP1-202ENST00000377017 ZNF500O60304 480 aaPredicted RBP13.44□□□□□ -0.26
TIMP1-202ENST00000377017 SNAP91O60641 907 aa13.44□□□□□ -0.26
TIMP1-202ENST00000377017 ZMPSTE24O75844 475 aa13.44□□□□□ -0.26
TIMP1-202ENST00000377017 NEBLO76041 1014 aa13.44□□□□□ -0.26
TIMP1-202ENST00000377017 MAP3K6O95382 1288 aa13.44□□□□□ -0.26
TIMP1-202ENST00000377017 HNRNPLP14866 589 aaKnown RBP eCLIP13.44□□□□□ -0.26
TIMP1-202ENST00000377017 CCNCP24863 283 aa13.44□□□□□ -0.26
TIMP1-202ENST00000377017 TARSP26639 723 aaKnown RBP13.44□□□□□ -0.26
TIMP1-202ENST00000377017 ATP5OP48047 213 aa13.44□□□□□ -0.26
TIMP1-202ENST00000377017 SERPINH1P50454 418 aaKnown RBP13.44□□□□□ -0.26
TIMP1-202ENST00000377017 VASPP50552 380 aaPredicted RBP13.44□□□□□ -0.26
TIMP1-202ENST00000377017 EIF3EP60228 445 aaKnown RBP13.44□□□□□ -0.26
TIMP1-202ENST00000377017 ARF5P84085 180 aa13.44□□□□□ -0.26
TIMP1-202ENST00000377017 MESP2Q0VG99 397 aa13.44□□□□□ -0.26
TIMP1-202ENST00000377017 AP1B1Q10567 949 aa13.44□□□□□ -0.26
TIMP1-202ENST00000377017 TUBB2AQ13885 445 aa13.44□□□□□ -0.26
TIMP1-202ENST00000377017 CCINQ13939 588 aa13.44□□□□□ -0.26
TIMP1-202ENST00000377017 RFTN1Q14699 578 aaPredicted RBP13.44□□□□□ -0.26
TIMP1-202ENST00000377017 FNDC3BQ53EP0 1204 aaKnown RBP13.44□□□□□ -0.26
TIMP1-202ENST00000377017 INO80DQ53TQ3 878 aaPredicted RBP13.44□□□□□ -0.26
TIMP1-202ENST00000377017 SDE2Q6IQ49 451 aa13.44□□□□□ -0.26
TIMP1-202ENST00000377017 ADAT2Q7Z6V5 191 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms