RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 C10orf107Q8IVU9 208 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 SFRP1Q8N474 314 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 TMEM168Q9H0V1 697 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 H7C1W4 665 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 TDP2O95551 362 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 CYP2C9P11712 490 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 CKBP12277 381 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.81□□□□□ -0.52
VPS13A-205ENST00000376636 ATCAYQ86WG3 371 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 FBXO32Q969P5 355 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 TMEM260Q9NX78 707 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 RSL1D1O76021 490 aaKnown RBP11.81□□□□□ -0.52
VPS13A-205ENST00000376636 FGFR2P21802 821 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 IL27RAQ6UWB1 636 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 CKAP2Q8WWK9 683 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 PER1O15534 1290 aaPredicted RBP11.8□□□□□ -0.52
VPS13A-205ENST00000376636 H2AFXP16104 143 aaPredicted RBP11.8□□□□□ -0.52
VPS13A-205ENST00000376636 XIAPP98170 497 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 INSCQ1MX18 579 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 MILR1Q7Z6M3 343 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 TMIEQ8NEW7 156 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 METTL6Q8TCB7 284 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 PHF20Q9BVI0 1012 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 OPTCQ9UBM4 332 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 A0A0A6YYK5 440 aaPredicted RBP11.8□□□□□ -0.52
VPS13A-205ENST00000376636 NPHP3-ACAD11A0A0J9YXS1 232 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 COX7A2P14406 83 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 N4BP2L1Q5TBK1 243 aaPredicted RBP11.8□□□□□ -0.52
VPS13A-205ENST00000376636 TBC1D10CQ8IV04 446 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.8□□□□□ -0.52
VPS13A-205ENST00000376636 RPL5P46777 297 aaKnown RBP11.8□□□□□ -0.52
VPS13A-205ENST00000376636 RHOAP61586 193 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 SGCGQ13326 291 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 TKFCQ3LXA3 575 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 FAM131AQ6UXB0 335 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 LEMD2Q8NC56 503 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 PHF21BQ96EK2 531 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 ZNF354BQ96LW1 612 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 SEMA6AQ9H2E6 1030 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 CHMP1AQ9HD42 196 aaPredicted RBP11.8□□□□□ -0.52
VPS13A-205ENST00000376636 TELO2Q9Y4R8 837 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 MRASO14807 208 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 ZC3H11AO75152 810 aaKnown RBP eCLIP11.8□□□□□ -0.52
VPS13A-205ENST00000376636 LRIG2O94898 1065 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 ZBTB6Q15916 424 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 PERM1Q5SV97 790 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 FATE1Q969F0 183 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 TMEM143Q96AN5 459 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 MOV10Q9HCE1 1003 aaKnown RBP11.8□□□□□ -0.52
VPS13A-205ENST00000376636 EFR3BQ9Y2G0 817 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 A0A087WZ62 844 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 RRN3P2A6NIE6 340 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 ZBTB14O43829 449 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 FGFR1P11362 822 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 CXCR2P25025 360 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 CYP4F2P78329 520 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 CYP4F3Q08477 520 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 FAM92BQ6ZTR7 304 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 INO80EQ8NBZ0 244 aaPredicted RBP11.8□□□□□ -0.52
VPS13A-205ENST00000376636 ERGIC2Q96RQ1 377 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 ZNF607Q96SK3 696 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 GMIPQ9P107 970 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 TCOF1Q13428 1488 aaKnown RBP11.8□□□□□ -0.52
VPS13A-205ENST00000376636 IL18R1Q13478 541 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 BMT2Q1RMZ1 405 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 RASGEF1AQ8N9B8 481 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 KLHL23Q8NBE8 558 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 NOA1Q8NC60 698 aaKnown RBP11.8□□□□□ -0.52
VPS13A-205ENST00000376636 CDRT15Q96T59 188 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 MED11Q9P086 117 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 SNX7Q9UNH6 387 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 SAMD4AQ9UPU9 718 aaKnown RBP11.8□□□□□ -0.52
VPS13A-205ENST00000376636 PP2D1A8MPX8 630 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 GH1P01241 217 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 NR2F6P10588 404 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 ARPC4P59998 168 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 MRPS22P82650 360 aaKnown RBP11.8□□□□□ -0.52
VPS13A-205ENST00000376636 ZNF613Q6PF04 617 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 PCDH9Q9HC56 1237 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 POLD4Q9HCU8 107 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 DPP3Q9NY33 737 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 TDRKHQ9Y2W6 561 aaKnown RBP11.8□□□□□ -0.52
VPS13A-205ENST00000376636 F5H6K3 240 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 H3BNX3 289 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 EIF5AP63241 154 aaKnown RBP11.8□□□□□ -0.52
VPS13A-205ENST00000376636 KLRC3Q07444 240 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 SMU1Q2TAY7 513 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 FSTL5Q8N475 847 aaPredicted RBP11.8□□□□□ -0.52
VPS13A-205ENST00000376636 PIH1D2Q8WWB5 315 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 RAB23Q9ULC3 237 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 SQORQ9Y6N5 450 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 CYP2A13Q16696 494 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 ARHGAP36Q6ZRI8 547 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 CARNMT1Q8N4J0 409 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 SNX6Q9UNH7 406 aa11.8□□□□□ -0.52
VPS13A-205ENST00000376636 SYT12Q8IV01 421 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 MARCH10Q8NA82 808 aaPredicted RBP11.79□□□□□ -0.52
VPS13A-205ENST00000376636 FAM136AQ96C01 138 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 DPP7Q9UHL4 492 aa11.79□□□□□ -0.52
VPS13A-205ENST00000376636 MEMO1Q9Y316 297 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms