RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 KIRREL3Q8IZU9 778 aa18.26■□□□□ 0.51
PTPDC1-202ENST00000375360 MREGQ8N565 214 aa18.26■□□□□ 0.51
PTPDC1-202ENST00000375360 ACBD6Q9BR61 282 aa18.26■□□□□ 0.51
PTPDC1-202ENST00000375360 ZDHHC6Q9H6R6 413 aa18.26■□□□□ 0.51
PTPDC1-202ENST00000375360 ACTR8Q9H981 624 aa18.26■□□□□ 0.51
PTPDC1-202ENST00000375360 SPG21Q9NZD8 308 aa18.26■□□□□ 0.51
PTPDC1-202ENST00000375360 ALOX15BO15296 676 aa18.26■□□□□ 0.51
PTPDC1-202ENST00000375360 CCDC149Q6ZUS6 474 aa18.26■□□□□ 0.51
PTPDC1-202ENST00000375360 TAS1R3Q7RTX0 852 aa18.26■□□□□ 0.51
PTPDC1-202ENST00000375360 ACOX2Q99424 681 aa18.26■□□□□ 0.51
PTPDC1-202ENST00000375360 PCDHB9Q9Y5E1 797 aa18.26■□□□□ 0.51
PTPDC1-202ENST00000375360 MYH14Q7Z406 1995 aaKnown RBP18.25■□□□□ 0.51
PTPDC1-202ENST00000375360 CNTRLQ7Z7A1 2325 aa18.25■□□□□ 0.51
PTPDC1-202ENST00000375360 RNASEH1O60930 286 aaKnown RBP18.25■□□□□ 0.51
PTPDC1-202ENST00000375360 SEC24DO94855 1032 aaPredicted RBP18.25■□□□□ 0.51
PTPDC1-202ENST00000375360 TNFRSF8P28908 595 aa18.25■□□□□ 0.51
PTPDC1-202ENST00000375360 SERPINB3P29508 390 aa18.25■□□□□ 0.51
PTPDC1-202ENST00000375360 PURAQ00577 322 aaKnown RBP18.25■□□□□ 0.51
PTPDC1-202ENST00000375360 CA9Q16790 459 aa18.25■□□□□ 0.51
PTPDC1-202ENST00000375360 GALNT4Q8N4A0 578 aa18.25■□□□□ 0.51
PTPDC1-202ENST00000375360 CERS4Q9HA82 394 aa18.25■□□□□ 0.51
PTPDC1-202ENST00000375360 SYBUQ9NX95 663 aa18.25■□□□□ 0.51
PTPDC1-202ENST00000375360 ARHGAP26Q9UNA1 814 aa18.25■□□□□ 0.51
PTPDC1-202ENST00000375360 C10orf71Q711Q0 1435 aa18.25■□□□□ 0.51
PTPDC1-202ENST00000375360 ATG7O95352 703 aa18.25■□□□□ 0.51
PTPDC1-202ENST00000375360 CRELD2Q6UXH1 353 aaPredicted RBP18.25■□□□□ 0.51
PTPDC1-202ENST00000375360 NECAB2Q7Z6G3 386 aa18.25■□□□□ 0.51
PTPDC1-202ENST00000375360 NAT16Q8N8M0 369 aa18.25■□□□□ 0.51
PTPDC1-202ENST00000375360 OMDQ99983 421 aa18.25■□□□□ 0.51
PTPDC1-202ENST00000375360 THUMPD3Q9BV44 507 aaKnown RBP18.25■□□□□ 0.51
PTPDC1-202ENST00000375360 CCDC90BQ9GZT6 254 aa18.25■□□□□ 0.51
PTPDC1-202ENST00000375360 SERPINE1P05121 402 aa18.25■□□□□ 0.51
PTPDC1-202ENST00000375360 GLUD2P49448 558 aa18.25■□□□□ 0.51
PTPDC1-202ENST00000375360 OSBPL1AQ9BXW6 950 aa18.25■□□□□ 0.51
PTPDC1-202ENST00000375360 RGS17Q9UGC6 210 aaPredicted RBP18.25■□□□□ 0.51
PTPDC1-202ENST00000375360 ZNF7P17097 686 aaPredicted RBP18.24■□□□□ 0.51
PTPDC1-202ENST00000375360 GALNT3Q14435 633 aa18.24■□□□□ 0.51
PTPDC1-202ENST00000375360 STARD3Q14849 445 aa18.24■□□□□ 0.51
PTPDC1-202ENST00000375360 RD3Q7Z3Z2 195 aa18.24■□□□□ 0.51
PTPDC1-202ENST00000375360 TTC7BQ86TV6 843 aa18.24■□□□□ 0.51
PTPDC1-202ENST00000375360 TAC4Q86UU9 113 aa18.24■□□□□ 0.51
PTPDC1-202ENST00000375360 TNS4Q8IZW8 715 aa18.24■□□□□ 0.51
PTPDC1-202ENST00000375360 ACSS3Q9H6R3 686 aa18.24■□□□□ 0.51
PTPDC1-202ENST00000375360 ARHGEF4Q9NR80 690 aa18.24■□□□□ 0.51
PTPDC1-202ENST00000375360 CLCA2Q9UQC9 943 aa18.24■□□□□ 0.51
PTPDC1-202ENST00000375360 TRAV19A0A0A6YYK7 116 aa18.24■□□□□ 0.51
PTPDC1-202ENST00000375360 BTN3A1O00481 513 aa18.24■□□□□ 0.51
PTPDC1-202ENST00000375360 CCNT2O60583 730 aaKnown RBP18.24■□□□□ 0.51
PTPDC1-202ENST00000375360 SH3BGRLO75368 114 aa18.24■□□□□ 0.51
PTPDC1-202ENST00000375360 CYP3A5P20815 502 aa18.24■□□□□ 0.51
PTPDC1-202ENST00000375360 SYPL2Q5VXT5 272 aa18.24■□□□□ 0.51
PTPDC1-202ENST00000375360 ANKRD22Q5VYY1 191 aa18.24■□□□□ 0.51
PTPDC1-202ENST00000375360 TAPT1Q6NXT6 567 aa18.24■□□□□ 0.51
PTPDC1-202ENST00000375360 CTU1Q7Z7A3 348 aaKnown RBP18.24■□□□□ 0.51
PTPDC1-202ENST00000375360 CMC1Q7Z7K0 106 aa18.24■□□□□ 0.51
PTPDC1-202ENST00000375360 ARHGAP39Q9C0H5 1083 aa18.24■□□□□ 0.51
PTPDC1-202ENST00000375360 MORF4L1Q9UBU8 362 aa18.24■□□□□ 0.51
PTPDC1-202ENST00000375360 MOXD2PA6NHM9 499 aa18.24■□□□□ 0.51
PTPDC1-202ENST00000375360 CTPS1P17812 591 aa18.24■□□□□ 0.51
PTPDC1-202ENST00000375360 CCDC15Q0P6D6 951 aa18.24■□□□□ 0.51
PTPDC1-202ENST00000375360 TCEA2Q15560 299 aa18.24■□□□□ 0.51
PTPDC1-202ENST00000375360 SPDYE7PQ495Y7 208 aa18.24■□□□□ 0.51
PTPDC1-202ENST00000375360 RARS2Q5T160 578 aaKnown RBP18.24■□□□□ 0.51
PTPDC1-202ENST00000375360 TEDDM1Q5T9Z0 273 aa18.24■□□□□ 0.51
PTPDC1-202ENST00000375360 TEKT4Q8WW24 435 aa18.24■□□□□ 0.51
PTPDC1-202ENST00000375360 EME1Q96AY2 570 aa18.24■□□□□ 0.51
PTPDC1-202ENST00000375360 CBX6O95503 412 aa18.24■□□□□ 0.51
PTPDC1-202ENST00000375360 HALP42357 657 aa18.24■□□□□ 0.51
PTPDC1-202ENST00000375360 DAOAP59103 153 aa18.24■□□□□ 0.51
PTPDC1-202ENST00000375360 ITIH4Q14624 930 aa18.24■□□□□ 0.51
PTPDC1-202ENST00000375360 BRMS1LQ5PSV4 323 aa18.24■□□□□ 0.51
PTPDC1-202ENST00000375360 RASAL3Q86YV0 1011 aa18.24■□□□□ 0.51
PTPDC1-202ENST00000375360 SLC41A1Q8IVJ1 513 aa18.24■□□□□ 0.51
PTPDC1-202ENST00000375360 RNF148Q8N7C7 305 aa18.24■□□□□ 0.51
PTPDC1-202ENST00000375360 CPT1BQ92523 772 aa18.24■□□□□ 0.51
PTPDC1-202ENST00000375360 C16orf70Q9BSU1 422 aa18.24■□□□□ 0.51
PTPDC1-202ENST00000375360 MLPHQ9BV36 600 aaPredicted RBP18.24■□□□□ 0.51
PTPDC1-202ENST00000375360 FKBP9O95302 570 aa18.23■□□□□ 0.51
PTPDC1-202ENST00000375360 TBX18O95935 607 aa18.23■□□□□ 0.51
PTPDC1-202ENST00000375360 NUDT17P0C025 328 aa18.23■□□□□ 0.51
PTPDC1-202ENST00000375360 POLR2EP19388 210 aaKnown RBP18.23■□□□□ 0.51
PTPDC1-202ENST00000375360 PTK2BQ14289 1009 aa18.23■□□□□ 0.51
PTPDC1-202ENST00000375360 AGKQ53H12 422 aa18.23■□□□□ 0.51
PTPDC1-202ENST00000375360 LDLRAD1Q5T700 205 aa18.23■□□□□ 0.51
PTPDC1-202ENST00000375360 C16orf89Q6UX73 402 aa18.23■□□□□ 0.51
PTPDC1-202ENST00000375360 FKBP9P1Q75LS8 142 aa18.23■□□□□ 0.51
PTPDC1-202ENST00000375360 FBXO39Q8N4B4 442 aa18.23■□□□□ 0.51
PTPDC1-202ENST00000375360 PCDH19Q8TAB3 1148 aa18.23■□□□□ 0.51
PTPDC1-202ENST00000375360 HDAC10Q969S8 669 aa18.23■□□□□ 0.51
PTPDC1-202ENST00000375360 CATSPER2Q96P56 530 aa18.23■□□□□ 0.51
PTPDC1-202ENST00000375360 TSPAN18Q96SJ8 248 aa18.23■□□□□ 0.51
PTPDC1-202ENST00000375360 BBS2Q9BXC9 721 aa18.23■□□□□ 0.51
PTPDC1-202ENST00000375360 TCF7L2Q9NQB0 619 aa18.23■□□□□ 0.51
PTPDC1-202ENST00000375360 ZNF212Q9UDV6 495 aa18.23■□□□□ 0.51
PTPDC1-202ENST00000375360 SIX4Q9UIU6 781 aa18.23■□□□□ 0.51
PTPDC1-202ENST00000375360 TAF1P21675 1872 aa18.23■□□□□ 0.51
PTPDC1-202ENST00000375360 SYCE1LA8MT33 242 aa18.23■□□□□ 0.51
PTPDC1-202ENST00000375360 MPOP05164 745 aa18.23■□□□□ 0.51
PTPDC1-202ENST00000375360 CCDC166P0CW27 439 aa18.23■□□□□ 0.51
PTPDC1-202ENST00000375360 STX5Q13190 355 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms