RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 OR52L1Q8NGH7 329 aa11.71□□□□□ -0.53
VCL-202ENST00000372755 ABCC13Q9NSE7 274 aa11.71□□□□□ -0.53
VCL-202ENST00000372755 SAE1Q9UBE0 346 aaPredicted RBP11.71□□□□□ -0.53
VCL-202ENST00000372755 ZNF232Q9UNY5 417 aa11.71□□□□□ -0.53
VCL-202ENST00000372755 SH3GLB1Q9Y371 365 aa11.71□□□□□ -0.53
VCL-202ENST00000372755 TRPV2Q9Y5S1 764 aa11.71□□□□□ -0.53
VCL-202ENST00000372755 C1orf167Q5SNV9 1468 aa11.71□□□□□ -0.53
VCL-202ENST00000372755 CDC42BPBQ9Y5S2 1711 aa11.71□□□□□ -0.53
VCL-202ENST00000372755 EIF4BP23588 611 aaKnown RBP11.71□□□□□ -0.53
VCL-202ENST00000372755 GSSP48637 474 aa11.71□□□□□ -0.53
VCL-202ENST00000372755 ARHGEF19Q8IW93 802 aa11.71□□□□□ -0.53
VCL-202ENST00000372755 BRSK2Q8IWQ3 736 aa11.71□□□□□ -0.53
VCL-202ENST00000372755 COLGALT2Q8IYK4 626 aa11.71□□□□□ -0.53
VCL-202ENST00000372755 ZSWIM2Q8NEG5 633 aa11.71□□□□□ -0.53
VCL-202ENST00000372755 ATL1Q8WXF7 558 aa11.71□□□□□ -0.53
VCL-202ENST00000372755 RTFDC1Q9BY42 306 aaPredicted RBP11.71□□□□□ -0.53
VCL-202ENST00000372755 PTPRHQ9HD43 1115 aa11.71□□□□□ -0.53
VCL-202ENST00000372755 ANAPC2Q9UJX6 822 aa11.71□□□□□ -0.53
VCL-202ENST00000372755 HLA-DQA2P01906 255 aa11.71□□□□□ -0.53
VCL-202ENST00000372755 AKAP5P24588 427 aa11.71□□□□□ -0.53
VCL-202ENST00000372755 RPL21P46778 160 aaKnown RBP11.71□□□□□ -0.53
VCL-202ENST00000372755 CLK3P49761 638 aaKnown RBP11.71□□□□□ -0.53
VCL-202ENST00000372755 TOB1P50616 345 aaPredicted RBP11.71□□□□□ -0.53
VCL-202ENST00000372755 LY6KQ17RY6 165 aa11.71□□□□□ -0.53
VCL-202ENST00000372755 MZT2BQ6NZ67 158 aa11.71□□□□□ -0.53
VCL-202ENST00000372755 ZBTB10Q96DT7 871 aa11.71□□□□□ -0.53
VCL-202ENST00000372755 LACRTQ9GZZ8 138 aa11.71□□□□□ -0.53
VCL-202ENST00000372755 PAIP1Q9H074 479 aaKnown RBP11.71□□□□□ -0.53
VCL-202ENST00000372755 SNX6Q9UNH7 406 aa11.71□□□□□ -0.53
VCL-202ENST00000372755 CLTCL1P53675 1640 aa11.71□□□□□ -0.53
VCL-202ENST00000372755 ADGRB3O60242 1522 aa11.71□□□□□ -0.54
VCL-202ENST00000372755 APOC4-APOC2K7ER74 178 aa11.71□□□□□ -0.54
VCL-202ENST00000372755 APOC2P02655 101 aa11.71□□□□□ -0.54
VCL-202ENST00000372755 KLRK1P26718 216 aa11.71□□□□□ -0.54
VCL-202ENST00000372755 FBXL19Q6PCT2 694 aa11.71□□□□□ -0.54
VCL-202ENST00000372755 TMC3Q7Z5M5 1100 aa11.71□□□□□ -0.54
VCL-202ENST00000372755 C8orf59Q8N0T1 100 aaPredicted RBP11.71□□□□□ -0.54
VCL-202ENST00000372755 NKAPQ8N5F7 415 aaKnown RBP11.71□□□□□ -0.54
VCL-202ENST00000372755 AADATQ8N5Z0 425 aa11.71□□□□□ -0.54
VCL-202ENST00000372755 SLC2A14Q8TDB8 520 aa11.71□□□□□ -0.54
VCL-202ENST00000372755 UBASH3BQ8TF42 649 aa11.71□□□□□ -0.54
VCL-202ENST00000372755 SUSD6Q92537 303 aa11.71□□□□□ -0.54
VCL-202ENST00000372755 CDRT15Q96T59 188 aa11.71□□□□□ -0.54
VCL-202ENST00000372755 SMPD4Q9NXE4 827 aa11.71□□□□□ -0.54
VCL-202ENST00000372755 UBAP1Q9NZ09 502 aa11.71□□□□□ -0.54
VCL-202ENST00000372755 GAKO14976 1311 aa11.71□□□□□ -0.54
VCL-202ENST00000372755 MTRF1O75570 445 aaKnown RBP11.71□□□□□ -0.54
VCL-202ENST00000372755 AKR1A1P14550 325 aa11.71□□□□□ -0.54
VCL-202ENST00000372755 CYP2C18P33260 490 aa11.71□□□□□ -0.54
VCL-202ENST00000372755 SPIRE1Q08AE8 756 aa11.71□□□□□ -0.54
VCL-202ENST00000372755 NKX2-3Q8TAU0 364 aa11.71□□□□□ -0.54
VCL-202ENST00000372755 SPATA5L1Q9BVQ7 753 aa11.71□□□□□ -0.54
VCL-202ENST00000372755 FAIM2Q9BWQ8 316 aa11.71□□□□□ -0.54
VCL-202ENST00000372755 KCNK4Q9NYG8 393 aa11.71□□□□□ -0.54
VCL-202ENST00000372755 GNPTGQ9UJJ9 305 aa11.71□□□□□ -0.54
VCL-202ENST00000372755 CORO2BQ9UQ03 480 aa11.71□□□□□ -0.54
VCL-202ENST00000372755 LACTBL1A8MY62 500 aa11.7□□□□□ -0.54
VCL-202ENST00000372755 ACSL4O60488 711 aa11.7□□□□□ -0.54
VCL-202ENST00000372755 HMGCRP04035 888 aa11.7□□□□□ -0.54
VCL-202ENST00000372755 ANXA5P08758 320 aa11.7□□□□□ -0.54
VCL-202ENST00000372755 C21orf59P57076 290 aa11.7□□□□□ -0.54
VCL-202ENST00000372755 PABPC1LQ4VXU2 614 aaKnown RBP11.7□□□□□ -0.54
VCL-202ENST00000372755 SLC39A12Q504Y0 691 aa11.7□□□□□ -0.54
VCL-202ENST00000372755 DNAJC14Q6Y2X3 702 aaPredicted RBP11.7□□□□□ -0.54
VCL-202ENST00000372755 POLLQ9UGP5 575 aa11.7□□□□□ -0.54
VCL-202ENST00000372755 KPNA3O00505 521 aaPredicted RBP11.7□□□□□ -0.54
VCL-202ENST00000372755 KPNA5O15131 536 aa11.7□□□□□ -0.54
VCL-202ENST00000372755 CYP2R1Q6VVX0 501 aa11.7□□□□□ -0.54
VCL-202ENST00000372755 LRRC74BQ6ZQY2 392 aa11.7□□□□□ -0.54
VCL-202ENST00000372755 ZCCHC9Q8N567 271 aaKnown RBP11.7□□□□□ -0.54
VCL-202ENST00000372755 ZNF75CPQ92670 426 aaPredicted RBP11.7□□□□□ -0.54
VCL-202ENST00000372755 SEMA4DQ92854 862 aa11.7□□□□□ -0.54
VCL-202ENST00000372755 TKTL2Q9H0I9 626 aa11.7□□□□□ -0.54
VCL-202ENST00000372755 CCDC167Q9P0B6 97 aa11.7□□□□□ -0.54
VCL-202ENST00000372755 NEXMIFQ5QGS0 1516 aa11.7□□□□□ -0.54
VCL-202ENST00000372755 PPIDQ08752 370 aaKnown RBP11.7□□□□□ -0.54
VCL-202ENST00000372755 SLC45A4Q5BKX6 768 aa11.7□□□□□ -0.54
VCL-202ENST00000372755 PCID2Q5JVF3 399 aa11.7□□□□□ -0.54
VCL-202ENST00000372755 KCNT2Q6UVM3 1135 aa11.7□□□□□ -0.54
VCL-202ENST00000372755 EIF3MQ7L2H7 374 aaKnown RBP11.7□□□□□ -0.54
VCL-202ENST00000372755 STAG3L4Q8TBR4 150 aa11.7□□□□□ -0.54
VCL-202ENST00000372755 BCL2L14Q9BZR8 327 aa11.7□□□□□ -0.54
VCL-202ENST00000372755 SLC39A8Q9C0K1 460 aa11.7□□□□□ -0.54
VCL-202ENST00000372755 XPNPEP3Q9NQH7 507 aa11.7□□□□□ -0.54
VCL-202ENST00000372755 RPS6KA6Q9UK32 745 aa11.7□□□□□ -0.54
VCL-202ENST00000372755 N6AMT1Q9Y5N5 214 aa11.7□□□□□ -0.54
VCL-202ENST00000372755 LTA4HP09960 611 aaKnown RBP11.7□□□□□ -0.54
VCL-202ENST00000372755 FAAP100Q0VG06 881 aa11.7□□□□□ -0.54
VCL-202ENST00000372755 CXorf40AQ8TE69 158 aa11.7□□□□□ -0.54
VCL-202ENST00000372755 SOCS4Q8WXH5 440 aa11.7□□□□□ -0.54
VCL-202ENST00000372755 MCCC1Q96RQ3 725 aaPredicted RBP11.7□□□□□ -0.54
VCL-202ENST00000372755 PDHXO00330 501 aa11.7□□□□□ -0.54
VCL-202ENST00000372755 CXCL11O14625 94 aa11.7□□□□□ -0.54
VCL-202ENST00000372755 SLC9A3R1O14745 358 aaPredicted RBP11.7□□□□□ -0.54
VCL-202ENST00000372755 RPL3P39023 403 aaKnown RBP11.7□□□□□ -0.54
VCL-202ENST00000372755 DPYSL3Q14195 570 aa11.7□□□□□ -0.54
VCL-202ENST00000372755 EEF1AKMT1Q8WVE0 214 aa11.7□□□□□ -0.54
VCL-202ENST00000372755 KIAA1683Q9H0B3 1180 aa11.7□□□□□ -0.54
VCL-202ENST00000372755 TMEM39AQ9NV64 488 aa11.7□□□□□ -0.54
VCL-202ENST00000372755 CRNNQ9UBG3 495 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms