RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 ATP5F1P24539 256 aaPredicted RBP16.17■□□□□ 0.18
COL17A1-202ENST00000369733 MSX2P35548 267 aaPredicted RBP16.17■□□□□ 0.18
COL17A1-202ENST00000369733 GSCP56915 257 aaPredicted RBP16.17■□□□□ 0.18
COL17A1-202ENST00000369733 PDZK1Q5T2W1 519 aa16.17■□□□□ 0.18
COL17A1-202ENST00000369733 LIPMQ5VYY2 423 aa16.17■□□□□ 0.18
COL17A1-202ENST00000369733 TTC30AQ86WT1 665 aa16.17■□□□□ 0.18
COL17A1-202ENST00000369733 BORCS5Q969J3 196 aa16.17■□□□□ 0.18
COL17A1-202ENST00000369733 ELOVL6Q9H5J4 265 aa16.17■□□□□ 0.18
COL17A1-202ENST00000369733 SNTG2Q9NY99 539 aa16.17■□□□□ 0.18
COL17A1-202ENST00000369733 CCNT2O60583 730 aaKnown RBP16.16■□□□□ 0.18
COL17A1-202ENST00000369733 FESP07332 822 aa16.16■□□□□ 0.18
COL17A1-202ENST00000369733 MLNP12872 115 aa16.16■□□□□ 0.18
COL17A1-202ENST00000369733 YBX3P16989 372 aaKnown RBP eCLIP16.16■□□□□ 0.18
COL17A1-202ENST00000369733 MTTPP55157 894 aa16.16■□□□□ 0.18
COL17A1-202ENST00000369733 FNBP1LQ5T0N5 605 aa16.16■□□□□ 0.18
COL17A1-202ENST00000369733 ADGRD1Q6QNK2 874 aa16.16■□□□□ 0.18
COL17A1-202ENST00000369733 PACS1Q6VY07 963 aa16.16■□□□□ 0.18
COL17A1-202ENST00000369733 BPIFB6Q8NFQ5 453 aa16.16■□□□□ 0.18
COL17A1-202ENST00000369733 METTL6Q8TCB7 284 aa16.16■□□□□ 0.18
COL17A1-202ENST00000369733 ACTRT2Q8TDY3 377 aa16.16■□□□□ 0.18
COL17A1-202ENST00000369733 LSM7Q9UK45 103 aaKnown RBP16.16■□□□□ 0.18
COL17A1-202ENST00000369733 SESN1Q9Y6P5 492 aa16.16■□□□□ 0.18
COL17A1-202ENST00000369733 F5H5T6 163 aa16.16■□□□□ 0.18
COL17A1-202ENST00000369733 TAF4O00268 1085 aa16.16■□□□□ 0.18
COL17A1-202ENST00000369733 CRHR1P34998 444 aa16.16■□□□□ 0.18
COL17A1-202ENST00000369733 IL12RB1P42701 662 aa16.16■□□□□ 0.18
COL17A1-202ENST00000369733 SLC26A2P50443 739 aa16.16■□□□□ 0.18
COL17A1-202ENST00000369733 GRIK5Q16478 980 aa16.16■□□□□ 0.18
COL17A1-202ENST00000369733 HIST2H2ACQ16777 129 aaPredicted RBP16.16■□□□□ 0.18
COL17A1-202ENST00000369733 HIST2H2AA3Q6FI13 130 aa16.16■□□□□ 0.18
COL17A1-202ENST00000369733 FBXO30Q8TB52 745 aa16.16■□□□□ 0.18
COL17A1-202ENST00000369733 GJD4Q96KN9 370 aaPredicted RBP16.16■□□□□ 0.18
COL17A1-202ENST00000369733 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.16■□□□□ 0.18
COL17A1-202ENST00000369733 FAM155BO75949 473 aa16.16■□□□□ 0.18
COL17A1-202ENST00000369733 CYP1A1P04798 512 aaPredicted RBP16.16■□□□□ 0.18
COL17A1-202ENST00000369733 LTA4HP09960 611 aaKnown RBP16.16■□□□□ 0.18
COL17A1-202ENST00000369733 RXRBP28702 533 aa16.16■□□□□ 0.18
COL17A1-202ENST00000369733 ZNF177Q13360 481 aaPredicted RBP16.16■□□□□ 0.18
COL17A1-202ENST00000369733 EML3Q32P44 896 aa16.16■□□□□ 0.18
COL17A1-202ENST00000369733 SLC44A2Q8IWA5 706 aaPredicted RBP16.16■□□□□ 0.18
COL17A1-202ENST00000369733 ZFPM1Q8IX07 1006 aa16.16■□□□□ 0.18
COL17A1-202ENST00000369733 KCTD4Q8WVF5 259 aa16.16■□□□□ 0.18
COL17A1-202ENST00000369733 MKL1Q969V6 931 aa16.16■□□□□ 0.18
COL17A1-202ENST00000369733 ALG9Q9H6U8 611 aa16.16■□□□□ 0.18
COL17A1-202ENST00000369733 ACTR8Q9H981 624 aa16.16■□□□□ 0.18
COL17A1-202ENST00000369733 RAB26Q9ULW5 256 aa16.16■□□□□ 0.18
COL17A1-202ENST00000369733 TGFB2P61812 414 aa16.16■□□□□ 0.18
COL17A1-202ENST00000369733 DPYSQ14117 519 aa16.16■□□□□ 0.18
COL17A1-202ENST00000369733 FBXO16Q8IX29 292 aaPredicted RBP16.16■□□□□ 0.18
COL17A1-202ENST00000369733 B3GALNT2Q8NCR0 500 aa16.16■□□□□ 0.18
COL17A1-202ENST00000369733 TBCDQ9BTW9 1192 aa16.16■□□□□ 0.18
COL17A1-202ENST00000369733 TMEM191CA6NGB0 347 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 ZNF772Q68DY9 489 aaPredicted RBP16.15■□□□□ 0.18
COL17A1-202ENST00000369733 FAM47BQ8NA70 645 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 AGBL3Q8NEM8 1001 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 SLC2A14Q8TDB8 520 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 OMDQ99983 421 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 PORCNQ9H237 461 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 PRDM16Q9HAZ2 1276 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 TAS2R13Q9NYV9 303 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 TRMUO75648 421 aaKnown RBP16.15■□□□□ 0.18
COL17A1-202ENST00000369733 IFNA14P01570 189 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 LHX1P48742 406 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 RHBDL3P58872 404 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 KLF10Q13118 480 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 ZACNQ401N2 412 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 ZC3H12AQ5D1E8 599 aaKnown RBP16.15■□□□□ 0.18
COL17A1-202ENST00000369733 PCID2Q5JVF3 399 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 ADHFE1Q8IWW8 467 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 ZNF513Q8N8E2 541 aaPredicted RBP16.15■□□□□ 0.18
COL17A1-202ENST00000369733 RDH11Q8TC12 318 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 SPPL2AQ8TCT8 520 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 GNEQ9Y223 722 aaKnown RBP16.15■□□□□ 0.18
COL17A1-202ENST00000369733 WASF2Q9Y6W5 498 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 GUCA1CO95843 209 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 OXCT1P55809 520 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 RTP1P59025 263 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 ASTE1Q2TB18 679 aaPredicted RBP16.15■□□□□ 0.18
COL17A1-202ENST00000369733 C6orf52Q5T4I8 152 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 TRIQKQ629K1 86 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 ARMCX6Q7L4S7 300 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 MAB21L3Q8N8X9 362 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 UBASH3BQ8TF42 649 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 UCMAQ8WVF2 138 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 NPAS2Q99743 824 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 SSU72Q9NP77 194 aaKnown RBP16.15■□□□□ 0.18
COL17A1-202ENST00000369733 TBKBP1A7MCY6 615 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 B3GAT3O94766 335 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 SEC24AO95486 1093 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 MTX3Q5HYI7 312 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 PPP1R15BQ5SWA1 713 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 NEPROQ6NW34 567 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 ZDHHC24Q6UX98 284 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 NECAB2Q7Z6G3 386 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 GALNT15Q8N3T1 639 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 DNAJB14Q8TBM8 379 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 SEMA4BQ9NPR2 832 aaPredicted RBP16.15■□□□□ 0.18
COL17A1-202ENST00000369733 UBAP1Q9NZ09 502 aa16.15■□□□□ 0.18
COL17A1-202ENST00000369733 TMA7Q9Y2S6 64 aaKnown RBP16.15■□□□□ 0.18
COL17A1-202ENST00000369733 SH3GLB1Q9Y371 365 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms